Oryzias latipes (Japanese medaka): 101167103
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Entry
101167103 CDS
T02443
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ola03029
]
101167103 (trub2)
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
101167103 (trub2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
TruB_C_2
VirJ
Motif
Other DBs
NCBI-GeneID:
101167103
NCBI-ProteinID:
XP_011492904
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Position
5:complement(527139..531676)
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AA seq
327 aa
AA seq
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MVTPLKLRRLHGLFCVYKPLGVHWKLVRDTIETNLLKGGNVAPPPALPHKVRFLAEPSPT
GEAGAAASLSAAPVPALSHHPLVTGPEFQHIRVGVGHRLDAASSGVLVLAVGNGNKALDD
LYKTRVTRDYMLECEFGMATKDFSHTGRVVEKSTYGHITLDKLERVLAMLEGANQKATRM
FSNVDMSSQEAYELAVQGLLGPDGKSAPILTGLRCVHFQPPSFTLEVQCLNETQKYLRKV
VHEIGLELRSTAVCKNVRRTRDGLFTSRQALTRNQWSAADVMQAVQQHRYTKKTEKTVRK
RSEESSAATRQSKADVMSSHRGKEHGS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccccgctaaagcttcgccggttacacggcttgttctgtgtttacaaacccctc
ggcgtgcactggaagctcgtgcgtgataccatcgagactaacctccttaaaggagggaac
gtcgcccccccaccggctcttccccacaaggttcggttcttggcggaaccgagtccgacc
ggcgaggccggagcggcggcgtcgctgtccgcggcaccggtgcctgcgctctcccatcat
cctctggtaaccggacctgaattccaacacatacgcgttggagtcggccatcgcctggac
gccgcctcctctggagttctggttctcgctgttgggaatggaaacaaggctctagatgac
ctgtacaagacacgagtgacccgggattatatgctggaatgtgaatttgggatggcaacc
aaagacttctctcacacgggtcgagttgtggaaaaatccacttacggtcacatcactctt
gataagctggagagagtgctggcaatgctggagggagccaatcagaaggcaacgagaatg
ttctccaacgttgacatgagctcccaggaagcctatgagttggccgtgcagggcctgctg
ggccccgatgggaaatctgctcccattttgacaggactgcgatgcgttcacttccagcct
ccaagcttcactttagaggtgcagtgcctgaatgaaacgcagaaatacttgcggaaagtg
gtgcacgagatcggactggagctgcgcagcacagccgtgtgcaaaaacgtgaggcgcaca
cgagacggactcttcacgtcccgccaggcgctcacccgaaaccagtggagcgccgcagac
gtcatgcaggcggttcagcagcaccgctacaccaagaagacggagaaaaccgtgaggaaa
aggtctgaagaaagctccgccgccactcgtcagagcaaagcggatgtgatgtcatcgcac
agaggaaaagaacatggcagctaa
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