Oryzias latipes (Japanese medaka): 101167295
Help
Entry
101167295 CDS
T02443
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03420
Nucleotide excision repair
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101167295 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
101167295 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101167295 (ercc8)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101167295 (ercc8)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
101167295 (ercc8)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
101167295 (ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Nup160
Motif
Other DBs
NCBI-GeneID:
101167295
NCBI-ProteinID:
XP_020561476
LinkDB
All DBs
Position
9:9274583..9285484
Genome browser
AA seq
405 aa
AA seq
DB search
MLGFLTARRAGLDDPLRLRRAESTRRVLNLKLNPDRDVDRIHGNGINSIDIETIEGRYML
SGGADGVIVIYDLENYSGKPQYTCKAVCTVGRSNRHVHKFSVETVLWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFESNIYNHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSKIH
VLQGHKAEVLSVRWSPRYEHILATASADSKVKVWDVRRASGSLFSLDQDNGDKSKSSSEA
VNTAHNGRVNGLSFTSDGLFLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKGLQFTV
SQGCSPEFVFVPCGSSVAVYVLHTGELVTMLRGHYNNVDCCKFHPDHQELYSGGKDGNIL
AWVPVLRASDMEEESDQKNKDVLQGAADSSAGNRALQDAWSSDED
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttaggatttttgacggcaaggcgggcagggctggatgatcctttgagactgagacga
gcagaatcaacgagaagggttctcaatctgaaattaaatcctgacagggatgtggatcgg
atccatgggaatggcattaatagcatcgatattgaaacaatcgagggaagatacatgtta
tctggcggtgctgatggagtgattgtcatctatgacctggaaaactacagcgggaagcca
caatacacctgcaaggcggtctgcacagttggccggtccaaccgacatgttcacaagttc
agtgtagaaacagttctttggtatccttatgacacggggatgtttgtctccagttccttc
gacaagaccatgaaggtttgggatactgagactttaaagcccgctgaagtgtttgagttt
gagagtaatatctacaatcaccacctgtccccaatcgccaggaagcacagtctcattgca
gttggcaccaaaaaccctaaaatccagctatgtgacttgaagtctggctcaaaaattcat
gttcttcaaggtcacaaagcagaagtactgtccgtgcgatggtcgccgagatatgagcac
attttagccactgccagtgcagacagcaaagtaaaagtgtgggatgttcgtcgagcatct
ggcagcctcttctctcttgaccaggacaatggagacaagtccaaatcctcctcagaagca
gtgaacacggcacataatggcagagtgaatggtctgtccttcacaagtgatggcctcttc
ctcttaactactggaactgatgacagaatgaggttatggaatagtgctactggggaaaat
acattggtgaattatgggaaagtttgcaacgagagccgtaaagggctgcagttcacagtg
tctcagggctgcagcccagagttcgtgttcgtgccgtgtggcagctcagtggcagtgtat
gtcctccacacaggagagctggtcactatgctcaggggtcactacaacaatgttgactgc
tgcaagttccatccagaccaccaggagctgtacagtggaggcaaagacggtaacatacta
gcatgggttcctgtacttcgggcttcagatatggaagaagagtctgaccaaaagaataag
gatgttttacagggtgccgctgattcgtctgcagggaatcgtgccttacaggatgcgtgg
agcagtgatgaagactaa
DBGET
integrated database retrieval system
