Oryzias latipes (Japanese medaka): 101167331
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Entry
101167331 CDS
T02443
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04517
IgSF CAM signaling
ola04520
Adherens junction
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101167331
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101167331
04530 Tight junction
101167331
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GFIT
Motif
Pfam:
DIL
PDZ
RA
PDZ_6
PDZ_2
RA_3
Motif
Other DBs
NCBI-GeneID:
101167331
NCBI-ProteinID:
XP_023807704
LinkDB
All DBs
Position
22:1130915..1141357
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AA seq
1230 aa
AA seq
DB search
MPETAQQLEFSKVINRWNSNRLDLFHISQPDEQNLEFHGVVRFFYEEETEGGAATKCLRV
SSSSPTRQVLQTLSERFRPDMKMLTSRYALYEVHGDEERKLEPEEKPLVVQLSWNSGNRE
GRFVLKKDDDHVEETDRGGEKGGVLQIFRRTLSRKGRKENRSRGADRSRSTEDLLNNNSL
CWSNPHIQKHEGEELRQPGLPLGIYFCDDAEEAFLSAVISDTSSSTDHFRLSPAFVLYTA
ARFALQRRPASSSYRDGVASIANKMVTMIETVIQASPDLIQSQQFMVGSLAFWLANSSEL
LIFLKRDKDLGPLTQHSQLDLSHLVHTAYSKDEKLTSSFTDLFMTKVLRDEPNIKAFHDQ
IPPKNVLEPVGPSSETRFSFDLMFPFSFLLQSLRNQLCQHLPTFLIDPERHGALPDGLEM
VLNTLMSSMSLLRRCRVNPAFSIQLFSQLFHFISAWLFNKLVSSGTSHPGLRSHYWGSAV
RQRLTAIEVWAERQGLELVADYHLGHITQATTLLTMNKYSMEDATVISGTCFRLNSLQLR
TLLSGYLYAANEPSIPPVSTSTLEPSAGEPPLRSSTSNTTAHSLPSSPQGLIDAVVGAAE
TSADNLIRSEGRDIQMKERLDLQLPLLLPEEGFSCHSVSGVPQGLRDFLEPISQKGLCSL
APQADGKQDWTVHFGEPAGPGQCTLMAAQRQPTVESITLHKPVNSGMGVSIVAAKGAEQE
NLGIFIRSVVRGGPAEMDGRLAAGDQLLSVDGHSLHGLNQERAAAVMMQTGPVVTLQVAK
SGASYHGLQALMGPPAPENTSKGGGEAAPENGQPSVIGGRARREQTMHRSSPNLSGSHLE
DGHEPPSPHVKEKKPWASRSSIRADTFCREYVTLPNPKSKAVLSGVQPTITASLRPLEAP
GSKQKTFMRQSFSQDNLSVDSERPLLDKRQNKWEQNAKSGSVFSSFPIRCSASAHDILSG
RSSPSKPQQRGPDSCAGVWRAPFPQQAVPTVQPIRIDIPVTRAVYASPPLTTFQQNSSRT
GRTLHADRQGPWSPAGRVFSASAAPKASDKPQVSITPTKHVSFQEPPPQHRSSGPGRRGD
PRGLSDPWRREAREELRKQQRLLAVERLQQEVEELQKKEQRTSQENDRLRRLSLELQFQR
RLQEAQRGEEEEEEEEEILKNGTSQVQQNGSDPNKDCERNREENPPNEDEATSGENGLMG
TGFRNMNNVLVFLSGTGLKQNRTNDPTPAE
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaactgcccaacagctggagttttccaaagtcatcaaccgctggaacagcaac
cggctggacctgttccacatcagccaaccggatgagcagaacctggagtttcatggcgtc
gtccgcttcttctacgaggaagaaactgaaggcggcgccgccaccaagtgtctgcgggtg
tccagcagctccccgacccgacaggtccttcagaccctttcagagaggttcaggccggac
atgaagatgctgacgagccgctacgcgctgtacgaggttcacggagacgaagagcggaag
ttggagccggaggagaaacctttggttgttcagctgagctggaactcaggaaacagagaa
ggacgcttcgtcctgaagaaagacgatgaccacgtggaggaaaccgaccgggggggagaa
aagggaggcgttcttcagatctttagaaggacgctttcacgaaagggaaggaaggagaac
aggagcagaggagcagaccggtccagatcaaccgaagatcttctgaacaacaacagtctc
tgttggtccaacccccacatacaaaaacatgagggggaggagctccgtcagcccgggtta
ccgctgggaatttacttctgtgatgatgcagaggaagccttcctgtctgccgtcataagt
gacaccagcagctccacagatcatttcaggctgtcgccggcgttcgtcctctacaccgca
gcacgattcgctctgcagcgccgtccggcatcgtcgtcctacagagacggtgtggcgtcc
atcgcaaacaagatggtgaccatgatagagacggtcatccaggcaagtccagacctgatc
cagtcgcagcagttcatggtcggctctctggcattttggttggccaactcctctgagctc
ctcatcttcctgaagcgggacaaagacctcggcccgctcacacagcatagtcagctggac
ctgtcccacctggtgcacacagcttacagcaaagatgagaaactgacatcatcctttact
gatttatttatgaccaaagtgctccgtgacgagccaaacatcaaagcgtttcatgaccag
attccaccaaagaacgtcctagaacctgtaggaccgtcatcagaaacgcgcttcagcttt
gatctgatgtttcccttcagcttcctgctgcagagcctccggaaccagctgtgccaacat
ctaccgacgtttctgattgatcccgagcggcacggcgccctcccagatggactagagatg
gtgctgaacaccctgatgagcagcatgtctctgctccgccgctgtcgggtcaaccctgcc
tttagcatccagctcttctcgcagctcttccacttcatcagcgcctggctcttcaacaaa
ctcgtgagctcgggaaccagccaccccggcctgcgctcccactactgggggtctgcggtg
cgtcagaggctcacggccatcgaagtctgggcagagaggcagggcctggagctggtggcg
gactatcacctgggacacatcacacaggcaacaacactcctgaccatgaataagtactca
atggaggacgccacggtcatctcgggtacctgcttccggctgaactccctgcagctgcgg
acgttgctgagcggttatctgtacgcagccaatgagcccagcattcctccggtgagtact
tccacactagagccttcagcaggtgagccgcccctcaggtcttccaccagcaacaccact
gcacacagtctaccatcctcgccgcagggcttgatcgatgctgtggtgggggccgccgag
acctcagcggataaccttatccggagtgaaggacgggacatccagatgaaggagaggctg
gacctgcagctgcctctcctgctgccggaggaagggttctcctgccacagcgtcagcgga
gtcccgcagggcctccgagactttttggagccgataagccaaaaaggtctctgctcgctg
gcgcctcaggcagatggcaaacaggactggacggtgcattttggggaacctgcaggccct
ggacagtgcaccttgatggcggcgcagagacaaccaacagttgaaagcatcactttgcat
aaacctgtgaacagcgggatgggagtcagcatcgttgcagcaaagggagcagagcaggaa
aacctgggcatcttcatcagatcagtggtcaggggcggccccgctgaaatggatgggagg
ttagctgctggagatcagctcctcagtgtggacggtcacagtctgcacggactgaatcaa
gaaagggcggcggccgttatgatgcagaccggccctgtggtgaccttacaagtggccaaa
tcgggagcgagttaccacggcctgcaggctctgatgggccccccggctccagaaaacact
tcaaaggggggcggagaggcggctccagagaatggtcaaccgtccgtgatcggcggcaga
gcgaggagggagcagacgatgcaccgctccagccccaacctgtctggctctcacctggag
gacggacatgaaccccccagcccccatgtgaaggagaagaagccatgggcttccagaagc
agcatcagagccgatactttttgcagagaatacgtgactcttccaaacccaaaatccaag
gcggttctgagcggagtccagccgaccatcacagcgtctctcagacctttagaggccccc
ggctccaaacagaagaccttcatgcgccaatccttctctcaggacaacttgagcgtggac
agtgagcgccccctgctggacaaaaggcagaacaagtgggagcaaaatgcaaaatcgggg
agcgtcttttcctctttccccatccgctgcagcgcttctgcccacgacatcctgtcgggc
cgcagttctccctcaaagccgcagcagagaggccctgacagctgcgccggcgtctggaga
gcgccgtttccgcagcaggcggtgcccacagtccagcccatccgcatcgatatcccagta
accagagcagtttatgcaagtcctccgctcaccaccttccagcagaactcctccaggacc
ggccggacgctccacgcagacagacagggtccttggagcccagcgggtcgcgttttttcc
gcgtctgctgccccaaaagcatcagacaaacctcaggtgagcatcaccccgacgaagcac
gtgtcctttcaggagcctcctcctcagcacaggagctccggcccggggaggcgcggggac
ccgcgggggctgagcgacccctggagaagggaggcgcgggaggagctgaggaagcagcag
aggctcctggcggtggagcggctgcagcaggaagtggaggaacttcagaagaaggagcag
cggacatcccaggagaacgaccgactccgccggctcagcctggagctgcagttccagagg
agactgcaggaggctcagagaggggaggaggaggaggaggaagaggaggagatcctgaag
aacgggacgtcacaggtccagcagaacggttctgatccaaacaaagactgcgagcggaac
cgggaggaaaatcctccaaatgaagacgaagcgacgtcaggtgagaacggtttaatggga
accggcttcagaaacatgaacaacgttctggtgtttctctcaggaactggactgaaacag
aacagaaccaacgacccgacaccagcagagtga
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