KEGG   Oryzias latipes (Japanese medaka): 101167386
Entry
101167386         CDS       T02443                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101167386 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ola01009]
    101167386 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ola03400]
    101167386 (pnkp)
Enzymes [BR:ola01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     101167386 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     101167386 (pnkp)
Protein phosphatases and associated proteins [BR:ola01009]
 HAD phosphatases
  Other HAD phosphatases
   101167386 (pnkp)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101167386 (pnkp)
SSDB
Motif
Pfam: PNK3P AAA_33 FHA_2
Other DBs
NCBI-GeneID: 101167386
NCBI-ProteinID: XP_004076011
UniProt: H2MLN4
LinkDB
Position
13:32534925..32548836
AA seq 602 aa
MSCLLVTNTGARIVLEDGRAVILGRGPDTGVTDKKCSRHQVKVVACFAEQNVLVTQLGPN
PSFLEGEKLGRGQSGKLTHGGTLYLVNHRHPLTANFCLSSNGTAADMPKKGLKVTDKTKS
AGNQREKEAEPSPTPKRSIKDFFPASPVKSSKRRLSPEKDRPETKRQRRDQDADRAMKEE
EEEEGLAEEKLQQLQEFAAKESKAMKSSSSSSSSSSVQASVKSSWEQTGNLLVYTAAGVT
ASEKIAGFDIDGCIITTKSGKVFPTAPDDWKILYVEIQPKLSSLLKKGYKVVFFTNQLGI
AKGKLRPEVFKSKVEDVLATLQLPVQVFVAAGPGIYRKPVTGMWDHLCEKANDGVTVDLK
QSFYVGDAAGRPENWAPGKKKKDFSCSDRLFALNIGLQFHTPEEYFLGWKNAPFNLPDFD
PRKLDSAARLYDPPSASLISSLTEVIVAVGYPASGKSTFFHAHVIPKGYFYVNRDTLGSW
QKCVAVCERALSEGRSVAVDNTNPDPESRKRYVDVAKAAGVSCRCFHFSASLEQAKHNNR
FREMAPSDGKHAKVNEMVFHSYKKHFVAPALSEGFSEILQIHFVPNFKDRQSEVLFRQFS
EG
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgtcctgcttgttggtcaccaacactggagctcggattgtgctggaggacggacgcgct
gttattctgggccggggtccggacaccggagtcaccgacaagaaatgctccaggcaccag
gtgaaggtggttgcgtgttttgcagagcagaatgttcttgttactcagctgggtccaaat
cccagtttccttgaaggagagaagttgggtcgaggtcagtctgggaagctaacccacgga
ggcaccctctacctggtgaaccaccgccatccacttactgccaacttctgcctgagctcc
aacggaactgcagccgacatgcccaagaaaggattgaaagtgacagacaagactaaatcg
gcgggaaaccagagagagaaagaggctgaacccagcccaacacccaaacgcagcataaaa
gatttctttcctgcctctcctgtgaagtcatctaagagacgtctgagcccagaaaaagac
cgtcctgagacaaagcggcaaagaagagaccaggacgcagatcgagcgatgaaagaggag
gaggaggaggaagggctggctgaggaaaagcttcagcagctgcaggagtttgctgcaaag
gagagcaaagccatgaagtcctcatcctcctcatcctcttcgtcctcggtacaggcttcc
gtgaagagcagctgggagcaaacagggaacctgttggtttatacagctgcaggagtcaca
gcaagtgaaaagattgctggttttgacatcgatggatgcatcatcacaaccaaatcaggc
aaagtctttcctaccgcaccagacgactggaagattctttacgtagagattcagccaaaa
ctgtccagtttgcttaagaaaggatacaaggtggtgttcttcaccaaccagctcgggatc
gccaaaggcaaactgaggccggaggtgttcaaatcgaaggtggaggacgtcctggccacg
ctgcagctgcccgtgcaggtgtttgtggcagccggtcctggaatctacaggaaaccagtg
acggggatgtgggaccacctgtgtgagaaggctaatgacggcgtgaccgttgacctcaaa
cagagcttctatgtgggagacgctgcagggaggccagaaaactgggctcctggcaaaaag
aagaaggatttttcctgcagtgaccgtttgttcgctctgaacattggactgcagttccac
accccggaggaatactttttaggctggaagaacgcccccttcaacctgcctgactttgat
cctaggaagctggactccgctgccaggctgtatgacccgccgtccgcctccctcatctcc
agtctcacagaagtcatcgttgccgtcggttatcccgcatccggtaaatcgaccttcttc
cacgcccacgttattccaaagggttacttctatgtcaacagggacacccttggctcctgg
cagaaatgcgtggcggtgtgtgagcgcgctcttagcgagggacgcagcgttgctgtcgac
aacaccaacccagacccggagtcgcgcaaacggtatgtggacgtagccaaagcagctgga
gtgtcgtgtcgctgtttccacttctctgcttctctggagcaagccaagcacaacaacaga
ttccgggagatggctccgtctgacggcaaacacgccaaggtcaatgaaatggttttccac
agttacaagaaacacttcgtggctcctgctctttccgaaggattctctgagattctccag
atccatttcgttccaaatttcaaggacagacagtcggaggttctgttccgacagttttct
gagggctga

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