Oryzias latipes (Japanese medaka): 101167407
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Entry
101167407 CDS
T02443
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101167407
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Protocadherins
101167407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF5783
Motif
Other DBs
NCBI-GeneID:
101167407
NCBI-ProteinID:
XP_004081830
UniProt:
H2MTY5
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All DBs
Position
21:23761389..23765472
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AA seq
1021 aa
AA seq
DB search
MRARSNFHFTTVQFIKRELRREPAADVKACLAHKEAARRGKISRKMTKGTLLTCWVFIFS
LHQFLFTSWARSEGNTVRLQTREEEPPGTVIGNLAKDMSLSLSHSSKSNFRMMKQFNDSF
IRVRESDGELSVGERIDRERICRHTPQCLITFDVVNFSKDRYKLIHVEVEIKDINDNSPE
FPSKEYMVEISENAALGSRIPLDPAVDADVGSNYIQSYQISVNSHFTIDVLLRADGVKYA
ELVLMKELDRETQSFYNVELVATDGGNPYRSGSSKITVKVTDFNDNSPVFDQNSFSVSLP
EDAPPGTVILDLNAVDADEGLNGEVVYGFGKQVSHEIRELFQVDSKSGHLTLRSPVDFED
KSTYEVDVQATDLGPNPTPSVCKIIIHVTDVNDNAPEISITPMTSITTGVAHISEAADRD
SLVALISTMDRDSGINSQVHCTLYGHDHFKLRQAHEDSYMIVTAAALDRERIREYNLTVM
AEDFGSPPLRKITQFTIRLNDENDNAPHFAKAVYEVPVVENNAPGAYITTVEASDADLGN
NGKITYRLVEGVIMGSPVNTFVSLNSMSGSIYALRSFNYEVMKQLDIHVQASDGGSPQLQ
STAIIRLKIVDQNDNQPAIIEPPLFKGSAEVFLPKDAPAGYVVTQIKATDADEGTNAQLS
YKIAEGGHLGFSIHKDTGKVHVSRQLAYDPTDMVKIIISVSDHGSPSLTSTAALILSFIE
GTIPSLPSLAEEGNEEGFEWDTSVAIIIVLAGSCSLLLLAIILITTICSRRKKEAKEGRF
DEKENAANVEKVESGHIDSLIANHNGKAFDSHQFSEDPSLANSNTAGSGCEDDKQTSGMF
EPNNRMEGKLKGYSTLPGYGKETVRPITIWKGNSFTTISAREPHFSGKDSGKGDSDFNDS
DSDISGDVHKKESPPINSLWACTNECKVLGHSDRCWSPSATRPNTSMACGPHLSTFSKTA
TLPRDARRENYYPALLPKTSGLQSVYEKVQHQEFDYILVGPPTPARIQETDEISIPEYTN
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcaaggagcaactttcacttcacaacagttcagttcataaagcgggagctgcgc
cgggagcctgcagcagatgtgaaggcttgtttggcgcacaaagaggctgctcgccgggga
aagattagcagaaagatgacaaagggcacacttctaacttgttgggtttttattttctcc
ctccatcagtttttattcacctcatgggcgcgttcggagggtaatactgtgaggttgcag
acccgagaagaggagccaccaggaacggtcatcggaaaccttgccaaggacatgtccttg
agtctgtcacattcctccaagagcaatttcaggatgatgaaacaattcaacgactcgttc
attagggtgagagaaagcgacggagaactctctgtcggggagcggatcgacagagaaaga
atctgcaggcacactccacagtgcctgattacttttgatgtggttaatttctccaaagat
cgctacaaattgattcacgttgaggtggaaataaaagacattaatgacaactccccggag
ttccccagcaaggaatacatggtggagatctctgagaacgcagcacttggatcccgtatc
ccattagacccagccgtggacgctgatgtggggtcaaactacattcaaagctatcagatt
tctgtgaacagtcactttaccatagatgtgctcctgagagcggatggggttaaatatgcg
gaattggttctcatgaaagagcttgacagagagactcagtcgttttataatgtggagctg
gtcgccacagacggagggaacccgtacagatccgggtcctcaaaaatcaccgtcaaagtg
acggacttcaatgacaacagtcccgtgtttgaccagaacagtttctccgtcagtttgccg
gaggacgcgccgcctggcacagtgatcctggacttgaacgcagttgacgctgacgagggt
ttgaacggagaggtggtttacggctttggaaagcaggtttctcatgagatccgagaactt
ttccaagtggatagtaaatcgggtcacctgacgctgcggagccccgtggattttgaggat
aaaagcacgtacgaggtggacgtgcaagcgactgatctgggaccgaacccgaccccctca
gtgtgcaaaatcatcattcacgtgacagacgtaaacgacaatgccccagaaatcagtatc
acccccatgacctccatcacgacaggtgtggcgcacatcagcgaggcggcagacagggac
agtctggtggcgctgatcagcaccatggacagagactcaggcatcaacagccaggttcac
tgcacgctgtatggccacgaccacttcaaactccggcaggctcacgaagacagctacatg
attgtgacagctgccgctctggacagggaaaggataagggagtacaacttgaccgtcatg
gctgaggatttcgggtcccccccgcttagaaaaatcacccaattcaccattagactaaac
gatgagaatgacaacgccccccactttgccaaagccgtctatgaggtcccagtggtggaa
aacaatgccccgggcgcctacatcaccacagttgaggccagcgacgctgatctgggcaac
aatgggaaaatcacttacaggcttgtggagggtgtgatcatggggtccccagttaatacc
tttgtgtctctcaattcaatgtctggctccatatatgcactgaggagtttcaattatgag
gtgatgaaacagctggacatacatgttcaagcaagtgatggcgggtcgccacagctgcag
agcacagccatcatcagattaaaaatagttgatcagaatgacaaccagcctgctatcata
gagccccctctcttcaagggttctgctgaggttttcctgcccaaagacgctcccgcgggt
tacgtcgtaacccaaataaaagccacagatgctgacgaaggcacaaacgcacagctgtcc
tataaaatcgcagagggggggcacctgggtttctccatccacaaagacacagggaaggtg
catgtcagtcgacaactggcgtatgatcctacagacatggtcaaaataatcatttccgtc
agtgatcatggatccccctcactgacctccacagctgcacttattttgagttttattgaa
ggtaccataccaagtttgccttcattggctgaggaaggcaacgaggaggggtttgaatgg
gacacatccgtggccataattatagtcctggcagggagctgctccctgctcctgctggcc
atcattctcatcacaaccatttgcagccgccgcaagaaagaggccaaggaggggaggttt
gatgaaaaagaaaatgcagccaatgtggaaaaagtggaaagcggacatattgattcactg
attgccaaccacaacggcaaggcatttgatagccatcaattttcagaggacccttcgcta
gccaacagcaacacagcagggtcaggctgtgaagatgacaagcagacatctggcatgttt
gagccaaacaacagaatggaggggaaactaaagggctactccacactgcctggatatgga
aaagaaactgtcaggccaataacaatatggaaaggaaattcattcacaacaatctcagca
agagagccccatttcagtggcaaggacagtggaaaaggggacagcgactttaacgacagc
gactcagacatcagcggggatgtgcacaaaaaagagtcaccaccaataaacagtctttgg
gcgtgcacaaacgaatgcaaagtactgggacactcagaccgatgctggagcccgtccgct
acaaggcccaacaccagcatggcctgtggacctcatctgtcaacattttcaaagacagca
acacttccccgggacgccaggagggaaaactactatcctgctctcctacccaaaaccagc
ggtctgcaaagtgtgtatgaaaaggtgcaacaccaggagtttgattatatccttgttggt
ccaccaacgccagctagaatacaggaaacggatgaaatatcaatcccagagtatacaaac
tcttag
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