Oryzias latipes (Japanese medaka): 101167467
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Entry
101167467 CDS
T02443
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
ola04261
Adrenergic signaling in cardiomyocytes
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101167467
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101167467
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
101167467
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101167467
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101167467
03036 Chromosome and associated proteins [BR:
ola03036
]
101167467
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
101167467
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
101167467
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
101167467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
InlK_D2
Motif
Other DBs
NCBI-GeneID:
101167467
NCBI-ProteinID:
XP_004075069
UniProt:
H2MA43
LinkDB
All DBs
Position
12:complement(24063549..24076766)
Genome browser
AA seq
445 aa
AA seq
DB search
MAAPGGDMQWCFSQVKGAIDDDVAEADIISTVEFNHTGELLATGDKGGRVVIFQQEIENK
SLPQFRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLW
KISERDKRPDGYNLKEDDGRYKDPNSITSLRVPVLIPMDLMVEASPRRVFANAHTYHINS
VSVNSDHETYLSADDLRVNLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPHQCNTF
VYSSSKGIIRLCDMRESALCDRHTKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT
RDYLSVKIWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMTGSY
NNFFRMFDRSQRRDVMLEASRENSKPMQVLKPRKVCAGGKRKKDEISVDSLDFNKKILHT
AWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacctggaggtgacatgcagtggtgcttctctcaggtgaaaggagccatcgat
gatgatgtcgctgaagcggacataatatctacagttgagtttaaccatacaggagagctg
ctggctactggagacaaaggagggcgggtggtgatttttcagcaggaaatagagaataaa
agcctgcctcagttccggagtgagtacaatgtttacagcaccttccaaagccacgagcca
gagttcgactacctgaagagtttggagatcgaagagaaaatcaacaagatccgctggctt
cctcagaagaatgctgcacagtttttgttgtcaacaaatgataagaccattaagttatgg
aaaatcagtgaacgagacaagagacctgatggttataacctgaaagaagatgatggaaga
tacaaagatcccaattccatcacatcactgcgggtacctgttttaatacccatggacctg
atggtggaagccagcccacggagggtgtttgccaatgctcacacctaccacatcaactct
gtttcggtgaacagcgaccacgagacctacctgtctgcagacgacctgcgcgtcaacctc
tggcacctggagattaccgaccgcagcttcaatattgttgatattaagccagccaacatg
gaggagctgacagaagtgatcacagcagcagaattccatcctcatcagtgcaacactttc
gtctacagcagcagcaaaggcatcatccgtctgtgcgacatgagggagtcagctctgtgt
gacaggcacaccaagctgttcgaggagccagaagatccgagtaaccgctccttcttctct
gagatcatctcctccatctcagacgtcaagtttagtcatagcggacgctacatgatgacc
agagactatttgtctgtgaagatttgggacctaaacatggaaaacaggccggtggagacc
tatcaggttcatgaatacctgaggagcaagctgtgctcgctctatgagaacgactgcatc
ttcgacaagtttgagtgctgttggaacggcaacgacagcgtggtcatgaccggctcgtac
aacaacttcttccggatgtttgaccgcagccagcggcgggatgtcatgctggaagcatcc
cgtgaaaacagcaagcccatgcaggtcctaaaaccgcggaaggtctgcgccggaggcaaa
cgcaagaaggatgaaatcagtgtggatagcttggacttcaataaaaaaatcctgcacact
gcttggcacccccaggacaacatcatcgctgtggcgacgactaacaacctctacatattc
caagacaaagtaaactaa
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