Oryzias latipes (Japanese medaka): 101167491
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Entry
101167491 CDS
T02443
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101167491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101167491
Membrane trafficking [BR:
ola04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
101167491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
101167491
NCBI-ProteinID:
XP_011486578
UniProt:
A0A3B3HNC0
LinkDB
All DBs
Position
19:12358422..12417486
Genome browser
AA seq
1484 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAQGEILEFGGVSNQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGRWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYMGGVSPDLHSSPLRLTSPTVREHPA
FRGWITAVSINGSLVTLDSSEGVSVTAGCGPDHQCQNGGVCSVINDQAVCDCSDTGYQGN
DCSEEHSYTPGLAHLMIGDQAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWHDVRVTRNLR
QHSGIGHATVTISVDGILTTTGYTQEDYTMLGSDDSFYVGGSPSTADLPGSPVSNNFMGC
LKEVVYKNNDVRLELSRLAKQGDPKMKVTGVVSFKCESVATLDPVTFDTPESFVALSKWT
AKKAGSISFDFRTTEPNGLMLFSHGKPRQLQRKDPRTPPTVKVDFFAIEMLDGHLYLLLD
MGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDDALYL
GGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAESQRAVGVKPSCSKD
QSKQCLSNPCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDSSKFMKVQLPVAM
HTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGARVRLTVNLDCIRINCTASKGP
ETIFAGSGLNDNEWHTVRVVRRGKNLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEK
RFMPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKTIVSDPVTFRSRSSF
VTLSTLQAYYSMHLFIQFKTTSPDGLILFNRGDGNDFIVVELVKGYLHYVSDLGNGAHLI
KGSSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTTGAKNLDLKGDLYIGGVSKEM
FRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATVGQVERGCEGPSTTCQEDSCANR
GVCLQQWEGFTCDCSMTSYAGPLCNYGGTTYIFGRGGGLVIYTWPPNERPSTRADRLALG
FSTQQKHAILLRVDSSSGLGDYLQLQIDNGNIRVVFNVGTDDINIEESSRFVNDGRYHIV
RFTRSGGNATLQLDDLQVIERFPSGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTI
FNSQTTVRVGGDERGISMFQGQMSGLYYNGLRILKMAAEGHPHIKVEGSLRLVGDIPSSS
ITPQSSAAAGGNRSDSAPSISDITTTTATNKKQGATPQSADDLLVASAECPSDDEDIDPC
DPSSARSPLPEVPIFGDPSPGVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGS
YRVDESRNYISNSATQPNGSAKDKPLGITKISKNKKNKDKEYYV
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaatggcggtttgcgtttgggcggcagcccccctgctcttcctagggctgtgc
ctgtgcagtgtagggggccaggcccaaggggaaatcctggagttcgggggtgtatccaac
cagtgggggcggtttcccgtgtggaacgcctgctgcgagagtgtgctgagtttcagcctg
cggactcacagccaggagggcttgctgctctatctggatgatgagggtttctgcgacttc
ctggagctgctgcttctccacggccaccttcgcctgcgcttctccattttctgtgccgag
ccagccgagcttcagtcaggcgtggcggtgagcgatggacgatggcatgcggtgcgtgtc
aagcgggactggaggaacacctcgttggaggtggatgggcgactggagggatgggcagag
gtgaagagtaagagaagagacatgacagttttcagtcacacatacatgggtggggtgtca
ccagacctacactcttcgcccctgcgcctcacctcacccacagtgcgggaacaccccgcc
ttccgtgggtggatcacagcagtgagcatcaatggttcgctagtgacactggacagctca
gagggcgtctcagtgacagctggttgtggacctgaccaccagtgccagaacggaggggtg
tgcagtgtcatcaatgaccaggctgtctgcgactgctccgataccggctaccaaggcaac
gactgcagcgaagagcacagctacacgccaggtctggcacacctgatgattggcgaccaa
gctcgcgaggagtacgttgcaactttcaagggctctgagtacttctgttatgacttgtca
cccaaccccatccagtcgagcagcgatgaaatcacactttccttcaagacgttgcagcgc
aacggtctaatgctgcacacgggcaagtcagccgactacgtaaacttggcactcaaaaat
ggtgccgtgtcgcttgtcattaacctcggttctggggcgttcgaggccttagtggagccc
gtcaatggcaagttcaacgacaacgactggcatgatgtcagagtcacccgcaacctgaga
cagcactcaggcattggacacgctacggtgaccatctctgtggacggcatcctgaccaca
acaggctacactcaggaagactacacgatgctgggttcggacgactccttctatgtgggg
gggagccccagcactgccgacctccctggatctcctgtcagcaataactttatgggctgt
ctcaaagaggtggtttacaagaacaatgatgtgcggttagagctctctagactggctaaa
cagggagacccaaagatgaaggtgactggcgtggtgtcctttaagtgtgaaagtgtagca
acgctggacccagtgacctttgacaccccagagtcttttgtggcactaagcaagtggact
gcaaagaaggcagggtccatatcctttgacttcaggacaacagagcccaatgggctcatg
ctgttcagtcacgggaaacctcggcaactgcaacgcaaggatccaagaacgcctcctact
gtcaaggtggatttttttgctattgagatgctggacggacacctgtacctgctgctggac
atgggttctggaacgacaaagaccaaagccattgacagaaaagtcaacgatggagaatgg
tatcatgttgactttcagagagacgggcgttcaggaaccatctccgtgaatagtgtgaga
acagcttacacggccccgggagacagtgagatcctggacctggatgacgccctgtactta
ggaggactacccgaagaccgtgctggactcatcttccccactgaggtttggacggctctg
ctaaactacggttacgtaggctgtatcagagacctgtttgtggacgggcagagcaaagac
atccggcggctggctgagtctcagagagcggtgggcgtgaagccttcgtgctccaaagac
cagtcaaaacagtgcctgtctaacccctgccagcacaatggcatctgcagagagggctgg
aaccggtacgtctgcgactgctccgggacgggctacctgggccggtcctgtgagagagac
gcgaccatcctctcttacgacagcagcaagtttatgaaggtgcagctgcctgtggcgatg
cacactgaggcggaggacgtctcgctacgctttcgctcccagcgggcctatggcgttctc
atggcaaccacatcccgtaactcggcagatacccttcgtctggagctggatggtgcccgc
gttcgactcactgtcaacttagactgtatcaggataaactgtaccgccagtaaaggccct
gagaccatctttgctgggtcaggcctcaatgataatgagtggcacacagtgagggttgtc
cggcgtggcaagaacctcaaactcaccgtggacgatcttcagcctgttgaaggtcagatg
gcaggggaccacacccagctggagttccataatgtggagacgggaatcgtgacggagaag
cgcttcatgcccgctgtgccctccaatttcattggccaccttcaaggcctgacgctcaac
ggcatgccgtacattgacctatgcaagaacggcgacatcgactactgcgagctcaacgcc
gtcattggttataagaccattgtgtccgaccctgtcacgttccgctcccgctccagcttt
gtcacgctgtccacgctccaggcctactactccatgcatctcttcatacagttcaaaacg
acatctcccgacggactcattcttttcaacaggggagatggaaatgacttcatagttgta
gagctggttaaaggctacctgcattacgtttctgacttgggaaatggagcacatctgatc
aaagggagctccaacagccctctgaatgataaccactggcacaatgttcacatttcccgg
gacaccaacaatcttcacacagtcaagattgacaccaaagtcaccacacagactacgacg
ggtgctaagaaccttgacctaaagggtgatctgtacattgggggtgtttctaaagagatg
ttccgagacttgcctaagctggtccactcccgtgagggatttcagggttgcctagcaacg
gttgatctgaacggtcggctgccggaccttttggccgatgccctggcaaccgtggggcaa
gtggaaagaggatgtgaaggtcccagcaccacatgtcaggaagactcctgcgcaaatcgg
ggagtttgtttgcaacaatgggagggcttcacctgcgactgcagcatgacctcttatgct
ggacctctatgcaattacggtggtactacctacatctttggccgtggcggaggactggtg
atttacacatggccccctaatgaacgtcccagcaccagagcagaccggctggctctgggc
ttcagcacccaacagaaacatgccattctgctgcgagtagatagttcttctggtctggga
gactacctacagctgcagatagataatggcaacattagagtggtgtttaatgttggaact
gatgatatcaacatagaagagagctccaggtttgtcaacgacgggagataccacatagtt
cgtttcacccgcagtggtggcaatgcaaccctccagctggatgacctgcaggtcatagag
cgtttcccctcaggcaacaatgataacgagcgcctggccatcgccagacagcgaatcccc
tatcggcttggtcgagtagttgacgaatggctactcgacaaaggtcggcagctgaccatc
ttcaacagccagacgacggtgcgcgttggtggagatgagagaggcatatccatgttccag
ggacagatgtctggtctttattacaacggcctccgtatcctcaaaatggccgctgaggga
cacccacacatcaaagtggagggtagtttgcgactggtcggcgacattccttcctcctcc
attaccccgcagtcgagcgctgcagctggaggcaacagatctgactccgccccctcgata
agtgacatcacaaccacgacagccaccaacaagaagcagggtgccacaccacagtctgcg
gacgacctgctggtggcgtcagccgagtgtccaagcgacgatgaagacattgacccctgt
gatcccagttcagcacgctctcctctgccagaggttcctatatttggagatccatctcca
ggggtgcgggagagcagcagcaccacagggatggtggtgggcattgttgcagcagccgcc
ctctgcatcctcatcctcctctacgccatgtacaagtatcgcaaccgcgacgaaggctcc
taccgcgtggacgagagccgcaactacatcagcaactcagccacacagcccaacggcagt
gctaaggacaagcctttgggcatcaccaagatctctaagaacaagaagaacaaagacaag
gaatattatgtctga
DBGET
integrated database retrieval system