Oryzias latipes (Japanese medaka): 101167563
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Entry
101167563 CDS
T02443
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03266
Virion - Herpesvirus
ola04514
Cell adhesion molecule (CAM) interaction
ola04517
IgSF CAM signaling
ola04520
Adherens junction
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
101167563
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101167563
04517 IgSF CAM signaling
101167563
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101167563
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101167563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101167563
04090 CD molecules [BR:
ola04090
]
101167563
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
Nectin family
101167563
CD molecules [BR:
ola04090
]
Proteins
101167563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_2
Ig_3
I-set
ig
Ig_PVRIG
Ig_6
DUF6313
Motif
Other DBs
NCBI-GeneID:
101167563
NCBI-ProteinID:
XP_004076493
UniProt:
A0A3B3HUU3
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Position
14:13078951..13100272
Genome browser
AA seq
519 aa
AA seq
DB search
MDHAGLWIFLITTCVIPEVNGQTVEMDDGKSGYVGSKVDLRCRFINSSPPVKISQVTWQK
LVNGTKQSVAIANPSLGVSVAPPYRDRVTFRNAAVRRRTPSLEDTTIIFSSLRLSDEATY
ICEYTTFPAGNRENSVNLTVHVRPTTQMSLSSPTLVARSSNLKTPVATCISANGKPPGTI
RWETRVPGEVTTREYRNSDGTFTVQSDYILVPSKETHRETLTCVTTYNEEVYTDSVTLDI
QYEPDVTVEGFDGNWYLNRENVRLTCQADANPAVSLYQWRLVNGSIPSSVEVRDSILLFK
GPITYDLQGTYACDATNSIGTTSASVEVNIIEKPQPQIATGDVVSVIALLLAAGVLMGIT
ITVLVLKIRTRKDNTSNDSPSRKLSQPIKRRPGEDIQHLGKFYEELPNTADYVSYRLACN
KEDYPEPYSPPINPPLSFLPQNPHHTSQTMPSKGTSCTGTPSKNTFNPPSYTTAIFKYPS
VPGTSGQLTEVTGFKAEAPAGQSSSVSRGWSKDTDLFFA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgctggactttggatattcttaataacaacttgtgttattccagaggttaat
gggcagacggtggaaatggatgacgggaagtcaggatacgttggctcaaaggtggatctc
cgctgtcggttcatcaacagttctccaccagtcaaaatctctcaggtgacgtggcagaag
ctggtcaacggcaccaagcaaagcgtggcaatcgcaaatccatccttaggcgtctctgtg
gcgccgccctatcgggaccgtgtcacgttcagaaacgcagctgtgagaaggcgcacccct
tctctagaggacacgaccatcatcttctcctcgctccgcctctctgatgaagccacgtac
atctgtgaatacacaacatttcctgcggggaatagagagaactctgtgaatctgactgtg
catgtccggccgactacccagatgagtctttcctcccccacactggtggctcgttcatct
aatctcaaaaccccagtggcaacctgcatctctgcaaatggaaagcctcctggcaccatc
aggtgggagacgagggtgcctggagaagtgactacccgtgagtacagaaactcagatggg
acattcactgttcagagcgactacattttggtgcccagcaaggagacgcacagggagacg
ctcacctgtgtcacaacctacaatgaagaggtctacactgacagtgtcactctggacatt
caatatgaaccagatgtgacagtggagggctttgatgggaactggtacctgaatcgagag
aacgtccgtctgacttgccaagcagatgccaaccctgctgtctctctgtatcagtggaga
ctggtgaacggctcaatccccagcagcgttgaggtccgagacagcattcttctgttcaag
ggtccgatcacgtacgacctccagggcacttatgcatgcgacgccaccaacagcatcggg
accacttcagcgtctgttgaggtcaacattatagaaaagcctcagccgcagatcgcaaca
ggtgatgttgtcagtgtgattgccttattattggctgctggcgttctcatgggcatcacc
atcactgtgttggtgctcaaaataagaacccgaaaggataacacatcaaatgattctcct
tctagaaaactgtcccagcctataaaaagaagacccggggaagacatccagcatctgggg
aaattttacgaggagctgccaaacacagcagactatgtgagctaccgactggcctgtaac
aaagaggactaccccgagccctactccccacctatcaaccctcctctgtcatttctgcca
cagaacccccaccacacctcacagacaatgccttcaaagggtaccagctgcaccggcacc
ccttcgaagaacacttttaaccctccttcatacaccacagccatcttcaagtacccctct
gtgccaggcacctccggccagctaacggaagtgacaggattcaaagccgaagcgcccgct
gggcaatccagttcggtttcacgtggctggtccaaggacaccgatcttttctttgcttaa
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