Oryzias latipes (Japanese medaka): 101167601
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Entry
101167601 CDS
T02443
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101167601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101167601
Transporters [BR:
ola02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101167601
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
101167601
NCBI-ProteinID:
XP_011492909
UniProt:
H2N0L7
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Position
5:448389..479352
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AA seq
583 aa
AA seq
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MEKIPGSEVQVQMDLGTAHPAPSRGQWSNKMEFLLAVAGQIIGLGNVWRFPYLCYKNGGG
VFFIPYILFLFTCGIPLFLLETALGQYTSQGSITCWRKICPLFEGIGYGSQVVVSYSSMY
YIIILAWAFLYLFSSFNAELPWATCSNSWNTDNCVEFHQSLEPFNTTLTENATSPVREFW
ERRILNITGNINELGSVRWELALCLLLSWIICYFCVWKGVKSTGKVVYFTATFPYLMLVV
LLIRGLTLPGALNGIKFYLYPDPSRLADPQVWMDAGTQIFYSYAICIGCLTALGSYNKYN
NNCYKDCIYLCLLNSGTSFVAGFAIFSVLGFMAFEQQTDISKVAESGPGLAFIAYPRAVT
LMPLPQLWATLFFMMIILLGLDSQFVGLEALATAISDLNPSFFQVGHRRKLLLLVICVIC
FLIGLVMVTEGGLYVFQVFDYYACSGMTLLLFALLQSVCIAWVYGIDQFYDIIEDMIGYR
PVSAFKYLLKYVTPVICLGTFIFSLVKYTPLKFNNTIEYPWWGYSLGWWFTLSSTLVVPL
VMLYNLSVTPGTLRQRISLLCTPSEDLPLTKPEKTALELLKMS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatccccggttcagaggtccaggtccagatggacttgggaacagcacatcct
gctccctccagaggacaatggtcaaacaaaatggagttcctattggcggttgcaggacag
atcataggccttggaaacgtgtggaggtttccttacctgtgctacaaaaatggaggaggt
gtgttcttcatcccgtatatactcttcctctttacttgtggcattcccttgtttctgctg
gagacagcccttggccagtataccagccagggaagcatcacctgttggagaaagatctgt
ccattatttgaagggattggttatggaagccaagtggttgtttcatactccagtatgtac
tacatcatcatactggcctgggcattcctgtatctattctcctctttcaacgcagaactt
ccctgggcgacgtgcagtaacagctggaacaccgataactgcgtggagtttcatcaaagt
cttgaaccttttaacacgactttgactgaaaatgcaacatcaccagtgagagaattctgg
gagaggagaattctgaacatcacaggaaacatcaatgagctgggcagtgttcggtgggag
ctggctctgtgtctgctcttatcctggatcatctgttacttctgtgtgtggaagggagtg
aagtctactggaaaggtagtttacttcactgctaccttcccgtatctgatgctggtcgtg
ttgctcattcgtggactcacactcccaggggccttaaatggaatcaagttttacctttat
ccagatccgtcccgtcttgctgatccacaggtgtggatggatgccggcacgcaaatattt
tattcctatgctatttgcattggttgtcttactgcactgggcagctacaataagtacaac
aataactgctacaaggattgtatatatttgtgcctcttgaacagtggaaccagttttgtg
gctggttttgccattttctctgttcttggatttatggcctttgagcagcaaacagacata
tcaaaggtggcagagtcaggcccgggcctggctttcatcgcctatcctcgagctgtcacc
ttgatgcctcttcctcagctttgggcaacattatttttcatgatgatcatcctgctaggt
ctggacagtcagttcgtgggcctggaggctcttgcaacagccatttctgacttgaacccc
agcttcttccaagtcggccatcggcgtaaacttctgctgctcgtcatctgtgtcatctgt
tttctcattggcctggttatggtgacagagggaggactctacgtctttcaggtgtttgac
tattatgcctgcagtggaatgactctgctgctctttgctctgctgcagtccgtgtgtata
gcttgggtttatggtattgatcagttttatgacatcattgaagacatgatcggatacaga
cctgtgtctgcatttaagtacctcttgaaatacgtgaccccagtgatctgcttggggaca
ttcatcttctcgctggtcaagtacactcctctgaagttcaacaacaccatcgagtatccg
tggtggggttactcgcttggctggtggttcacgctttcatccacactggttgttccctta
gtgatgctgtacaacctgtccgtcactcccggtacactgcgacagagaatctcacttcta
tgcactccatctgaagaccttcctctgactaaaccggagaaaacggctctggagctgctg
aaaatgtcctaa
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