Oryzias latipes (Japanese medaka): 101167648
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Entry
101167648 CDS
T02443
Symbol
satb1
Name
(RefSeq) DNA-binding protein SATB1 isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101167648 (satb1)
03036 Chromosome and associated proteins [BR:
ola03036
]
101167648 (satb1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
101167648 (satb1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101167648 (satb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Motif
Other DBs
NCBI-GeneID:
101167648
NCBI-ProteinID:
XP_023819855
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All DBs
Position
16:30113712..30180135
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AA seq
860 aa
AA seq
DB search
MEHLSETCLGKENSELVNSMAEAKAPPAKLPRLEQNGSPLGRARLGSNGAKLAGVPYKPS
GHLLKTFHKRGNMLPVFCVVEHYENPMDFDSKEEHAEFVLVRKDMLFNQLIEMALLSLGY
SHSSAAQAKGMIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLEDLP
PEQWSHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGRWY
KHFKKTKDMMGMRQPSQLEGYLGTCVLRESPRANALAEMDGLSDLSPPGSNHNHLGFSQQ
QPIPGSTAEQTPSSPVPPMPHGPPPHGGQTASRQPQLPGLHHPGLVSTPISPQLVNQQLV
MAQILNQQYAVNRLLAQQSLSQQYLNHPPVNRSSHSKPMEPQVASNTEVSGEIYQWVRDE
LKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAMQNFLQLPEAERDR
IYQEERERSLTAASAMGSAPLISTPPSRPVQPRREDCNSIRPEDWNPRIPVGISPVKPSP
LPSEWNGKTESCILNINSTIYDEIQQEMKRAKVSQALFAKVAASKSQGWLCELLRWKEDP
SPENRTLWENLSMIRRFLSLSQAERDVIYEQESSAGQQHHGERPTHLIHLSADPLQTQPT
QTQQHQPSLSLHPSQPLLSQQPLQQLQQATPGPRLPPRQPSTASPAETEDEGSRGGSIKS
RTSGGKISLEALGILQSFIQDVGLYPDEEAVHTLSAQLDLPKLTIIKFFQSQRFYVNHPA
KLPKETSNNNNNNSATVNNNNTNGSGSSSSSPAFDEELTDFRESGELLKELDESTQTNST
IFSIKIEEQLSRAAEAEVKE
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctcagcgagacgtgtttgggcaaggagaactcggagctggtcaacagcatg
gcggaagccaaggccccgccggccaagctgccccggctggagcagaacggcagcccgctg
gggcgggcccgactgggcagcaacggggccaaactggcgggggtcccgtacaagcccagc
ggccacctgctgaagaccttccacaagagaggcaacatgctgccggtgttctgcgtggtg
gagcactacgagaaccccatggacttcgacagcaaggaggagcacgccgagttcgtcctg
gtgcgcaaggacatgctgttcaaccagctcatcgagatggctctgctgtcgctgggctac
tctcacagctccgccgcccaggccaaaggtatgattcaggtggggaagtggaaccccgtc
ccgctgtcgtacgtgacggacgcgccggacgccacagtggccgacatgctgcaggacgtt
taccacgtggtcacgctcaagatccagctgcacagttgtcctaagctggaggacctgccg
cctgagcaatggagccactcaacagtaagaaacgccctcaaggagttactcaaagacatg
aatcagagctctctggctaaagaatgtcctttatcacagagtatgatttcctccattgtg
aacagcacttactatgcaaatgtgtcggcggcgaagtgtcaggaatttgggcgctggtat
aaacatttcaagaagacaaaagatatgatgggcatgcgccaaccctcccagctggagggc
tacctggggacgtgtgttctccgtgagagcccgcgtgccaatgcactagctgaaatggac
ggcctgtccgacctctcccctcccggctccaaccacaaccacctgggcttctcccagcag
cagcccatccccggcagcacggcggagcagaccccttcctcgccggttccccctatgccc
cacggcccgccgccgcacggcggccagacggcgagccgacagccccagctccccggtctg
caccacccgggcctggtgtccacccccatcagcccccagctggtcaaccagcagctggtg
atggcgcagatcctcaaccagcagtacgcggtgaaccggctgctggcgcagcagtccctg
tcgcagcagtacctgaaccacccgcccgtcaaccgcagctcccacagcaagcccatggag
ccgcaggtggcgtccaacacggaggtctccggcgagatctaccagtgggtccgggacgag
ctgaaacgggccggcatctcgcaggccgtctttgctcgggtggctttcaacagaacccag
ggtttgctgtcggagatcctgcgtaaggaggaagaccccaagacggcgtcccagtcgctg
ctggtcaacctgcgggccatgcagaacttcctgcagctcccagaggccgagcgcgaccgc
atctatcaggaggagagggagcgcagcctcaccgcggcctctgccatgggctccgccccc
ctgatcagcacgccgcccagccggcctgtacagccccgccgcgaggactgcaacagcatc
cgacccgaggactggaatccacgcatccctgtgggcatttcacctgtgaaaccgtcgccg
ctgccgagcgagtggaacggcaagacggagagctgcatcctcaacatcaactccaccatt
tatgacgagatccagcaggagatgaagagggccaaagtgtcgcaggcgctcttcgccaag
gtggctgcctccaagagtcagggctggctctgcgagctgctgcggtggaaagaggatccg
tctccagagaaccggactctgtgggagaacctctcaatgatccgacgcttcctgagcctg
tctcaagccgagcgcgacgtcatctacgagcaggagagcagcgccggccagcagcaccac
ggcgagcggcccacgcacctcatccacctgtccgctgacccgctgcagactcagcccact
cagactcagcagcaccagccctctctgtccctccacccatcccagcctctgctgtcccag
cagcctttgcagcagctgcagcaggccaccccgggcccccgcctgccgccccgtcagccc
tccacagcctccccggctgagacggaggacgagggcagccgaggagggagcatcaagtcg
cgcaccagcggggggaagatctccttggaggctctggggatcctgcagagcttcatccag
gacgtggggctgtaccctgacgaggaggcggtccacaccctgtccgcccagctggacctg
cccaagctcaccatcatcaagttcttccagagccagcgcttttacgtcaatcatccagcc
aagctgcccaaggagaccagcaacaacaacaacaacaacagcgccacagtcaacaacaac
aacacaaacggcagcggcagcagcagcagcagccccgccttcgacgaggagctgacggac
ttcagggagagcggcgagctgctgaaggagctggacgagagcacgcagaccaacagcacc
atcttctccatcaagatcgaggaacagctgagccgcgccgccgaggccgaggtcaaggag
tag
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