Oryzias latipes (Japanese medaka): 101167689
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Entry
101167689 CDS
T02443
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1
KO
K11471
additional sex combs-like protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101167689 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101167689 (asxl1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
101167689 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
101167689
NCBI-ProteinID:
XP_011471318
LinkDB
All DBs
Position
7:complement(30120247..30148870)
Genome browser
AA seq
1534 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNAVQWTKSNSESEATSEQGGNAAVTASGNISS
AAASDAVIADSSETAEQESCNSETVVTTVMDNDALADESSSSASCSTELQPTSSQPQTRL
SRMTAGQHRRLDTQQAQHSQTRLSRSRQSGRQRKKAVMMPRVVLTPLKVNGEHVSSGPIK
RNRGGVDVDFETPGSILVNTNIRALINVRTFSAFPAHSQQQLLQLLPEVDRQVGPDGTAR
LSSSALNNEFFTHASQSWKERLAEGEFTHEMQVRLRQEMEKEKKVEAWKEKFFEEYHGQK
SGLTPEESLKLTVSEANEVTGSVLESDVSLVATGPSKRRSVGRRRRDGRMRRRTRVDLRR
RARRTLCKVSPALQSTEAAESSAGLDIAAVSIDSSVGSNTVVQAEVVLQADCAVELPTED
ASEEQKPFTPEAVVVAAPTPAPSRSSSPTSTSANEEPEVAAFLLPKEIPPVMASTSSPSS
SSSSSSASSPASSTSSPDRQGAFASGLDSSSSSSSSSSSATLPADPLDDAASVVTSITGG
TATSSRESSPSASPATADVLGTEQKRRQNEPEALPSFPEKRPRLDSRQSFRTTIDGVCSE
KPQPTTEEPKVPPIRIQLSRIKPPWVKGHPTYQICPRIVPSGEGSRRSGTGGARTLADIK
ARAQQARAQREAAAAVAASGERTGTTSVGLRPALGLSDSNSERRRREHPGPTEPGGGGQE
GTGDEKKAASEMEEQESSSDANSSGTQLQLQYVEAHCSPSLSNTSTSMSVESPQAPSPHQ
EGSARSLKVTEEVEETSATSQSSPCRFTDGPCNLSPDPNITSKSLGTQSFQANHLQESAD
VSEMAGKGCVKTILTQTSIPDSIPRFGTQGVDILQTIATSSQNKKQERQKEDGPCVIVQH
SSHHEEQREVSSHSVVKQPEGSLPQCDVNLSISRKKEEDANTHSDSTETASDCENEDQED
GQQELADQEWRYPLSTQCPGTQSQQLIVQSNMLGHKGQTVIQPCFPNGLPELQHNHPESQ
DHHSVITAPLLGFREKNAVVKIKLKEDRKASRTSYVEECQGSLKSPVIHLNVAAAPKRLA
GPARSVSSVEANNPLVTQLLQGSLPLEKVLPSHSANRLEISRLPGTQSRTPTLKNPGTRN
KTEVPVQLSSPEESAVPQVLNLSSVEQSGSCQSPVVSDYHPPMAPGAVPVITSAPPSFSS
SGLSSKTKPDVSLTAVESTVNKSHGSHSSQEGVANQCPDTHGSIPNLPSPPYVDPCPLEG
VAIIKVNLRPQQPQQVSPASPPKHEASTRPSCQALAKATSALTHGVLKKEPGNAIDGYLC
GGAMEGLLNMELTLARIAKKDHGKVSYSSSSPSPLSSSPSPSSSASSLPFPLYGKLPKQS
GCVGAVSYTANLSMMDNSGFTRGVTESVLQLRPRLAPSHATLSIQAFADSATDEVALKCS
CRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgaaggataaacaaaaaagaaagaaggagcgtacctgggctgaggcggcccgcatggtt
ttggagaacttctctgatgccccaatgacccctaaacaaattctgcacgtcatccagaca
aaagggttaaaggaaatgagaagtggtacggctcccctggcttgtctggtcaccatgctg
cactcccaggtaaggggagacagagtcaagaacagcatcttctttaaacttcccggacga
atgagtctcttcactctcaagaaaaatgccgtccagtggaccaagtcaaactctgaatct
gaggcgacatcagaacagggaggaaacgcagccgtcaccgcctccgggaacatctcctct
gcggctgcatccgatgcagtcattgcagactccagtgaaaccgcggagcaggagagctgc
aactcggagactgttgtgacgactgtgatggataatgatgcattggcggatgagagttcg
tccagtgcctcctgctccacagagctgcagcccaccagcagccagcctcagacccgcctc
agcagaatgacagcaggacagcacagacgtctggacacccagcaagcccaacattcccag
acccgactgagccgctcacgacagtctggaagacaaaggaagaaagctgtcatgatgccc
cgtgttgtcctcactcctctaaaagtaaatggagaacatgtctcatcaggacccataaaa
aggaatcgaggaggggtggatgtggactttgaaacacccggctccatccttgtgaacacc
aacatcagggctctgatcaacgtgaggacgttctctgccttcccggcacactcccagcag
cagctgcttcagcttctgccggaagttgatcgacaggtcgggcctgatggcacagccaga
ctgagtagttcagctctaaataatgaattcttcactcatgcttctcaaagctggaaagag
agattggctgaaggtgaatttacccacgagatgcaagtccgtttaaggcaggaaatggag
aaagaaaagaaggtcgaggcttggaaggagaagttttttgaagagtaccatgggcaaaag
tctggcctaactccagaggaatcactgaagctcactgtgagtgaagctaatgaagtaact
ggttccgtactggagagcgacgtttccttggtggcaactggtccttctaagagacgcagt
gtgggcagaaggaggagggatggcaggatgaggagacgtacacgcgttgaccttcgtcgc
agagctcgccggacgctctgcaaggtctctccagctttacagtctacagaagcagctgag
tccagtgctggactggacattgcagcagtatccattgactcgtctgtgggcagtaacaca
gtggttcaagcagaggtggtgctccaggctgactgtgcagttgagctccccactgaggat
gcctctgaagagcagaagcccttcacaccagaagcagttgttgtggctgctccaactcct
gctccaagtcgcagctcaagtccaacctctaccagtgcgaacgaggaacctgaagttgca
gctttccttctacccaaagaaatcccaccagtaatggcctccaccagctctccttcgtcc
tcatcctcctcctcgtctgcttcatctcctgcgtcttcaacctcatcacctgacagacaa
ggagcttttgcatcgggtctggactcatcttcatcttcctcctcatcatcctccagtgca
acacttccggctgatcccttggatgatgcagcctctgtggtcacttccatcactggtggc
accgcaaccagcagccgtgagagcagtccgtcagccagcccggccaccgctgatgtgctc
ggcactgagcagaagaggcgacaaaatgagcctgaagctctccccagctttccagagaaa
agaccacgacttgacagccgtcagtcctttcgtaccacaattgacggtgtctgttcagaa
aagccgcagccaacaaccgaagaaccgaaggtgccacccattcggattcaactatccaga
atcaaacctccatgggtcaaagggcaccccacttaccagatctgcccacggattgtgccc
tccggagagggctcacgccgctctggaactgggggagcacgaactctggcagacatcaaa
gcccgagcccagcaagcccgagcccagagggaggccgctgctgctgttgcggcctctggc
gaaaggacagggacgaccagtgtcgggctgcggcctgctcttgggctatcggatagcaac
agtgaacgacgaagaagagagcacccaggaccaaccgagcctggaggaggggggcaggaa
ggaaccggagatgagaagaaggcggccagtgaaatggaggagcaggaatcgtcttcagac
gctaattcgtctggaacacaattacagcttcaatatgtagaagctcactgttccccttca
ttatccaacacatccacctccatgtctgtggagtccccacaggcccccagtccccaccaa
gaggggtcagctaggagtctgaaagtaacagaagaggttgaagaaacatcagcaacttcc
cagagctccccctgtaggttcacagacgggccttgcaatctctccccagatcccaacatt
acatccaagtcattgggcacccaatcttttcaggcaaaccatttgcaggagtcagccgat
gtctccgagatggcaggcaaaggttgtgtaaaaaccatcctgacccaaacatcaatccct
gattccatccctaggtttgggactcagggtgtagacattttacagacaattgccacttct
tctcagaacaaaaagcaggaaagacaaaaggaggatggaccctgtgtcatcgtccagcat
agttcacaccatgaggaacagcgggaagtttcgtctcattcagtggtgaaacagccagag
ggttctcttcctcaatgtgatgtgaatctcagcatcagcagaaagaaagaagaagatgca
aatacacacagtgactccacagaaactgcttctgactgtgagaatgaagaccaggaggac
gggcagcaggagttggcggaccaagagtggcgctatcctctgagtacccagtgccctggt
actcagagccagcagctcattgtgcagtccaatatgctgggtcacaagggtcagacagtc
attcagccttgctttccaaatggtctacctgagcttcagcataaccaccctgagtcccag
gaccaccattctgtcattacggcacctttgctgggtttcagagaaaagaatgctgtggta
aaaattaagctcaaagaggaccgtaaagcctccagaacaagttatgttgaggagtgccaa
ggatctttaaagtctcctgtcattcatttaaatgttgctgctgctcccaaaagactggct
ggtccagccagatctgtttcaagtgtggaggccaacaaccctcttgttactcagcttcta
cagggcagtcttccccttgaaaaagtcctcccttcacactcagccaacaggctggagata
agccgactcccaggaactcaatccaggacaccaactctaaagaacccaggaactcgcaac
aaaactgaggtcccagtccaactttctagtccagaagaatcagctgttcctcaggttctt
aacctgtcatcagtagagcaatctggttcctgtcagtccccagttgtgtcagactaccac
cctccgatggcccctggtgctgtcccagttattacttctgcaccaccctctttttcttct
tctggattgtcatccaaaaccaaaccagatgtgtctcttactgcagtggagtctacggtc
aacaagtctcatggctcccactcatcacaggagggtgttgccaaccagtgcccagatact
catgggagtatacctaatttaccctcccctccctatgtggacccctgtcccctggagggg
gtggcaatcataaaggtcaatctacggcctcagcaacctcagcaggtgtctcctgcttcc
cctccgaaacatgaagctagcacccggccgtcttgccaggccttggctaaggctacgtca
gctttaacccatggtgttctcaaaaaggaacctgggaatgcaatagatgggtacctgtgt
ggaggagccatggagggacttctcaacatggagctgacactggcaaggatagccaaaaaa
gaccatggaaaagtttcatactcatccagctccccttcacccttgtcctcatctccctca
ccttcctcttccgcctcctccctgcccttcccgttgtatggaaagcttcccaaacagagt
ggatgtgtgggagctgttagctacacagccaacctgtcaatgatggacaacagtggtttt
acccggggtgtgactgaaagcgtgctccagctacgccctcgtctggcgcccagccacgct
actctcagcatccaagcattcgccgacagtgcaaccgacgaggtggccctgaagtgctcc
tgccgcctcaaagccatgatcatgtgccaaggctgtggggctttttgccacgatgattgc
attggaccctccaaactgtgtgtgtcgtgccttgttgtcagatag
DBGET
integrated database retrieval system
