Oryzias latipes (Japanese medaka): 101167788
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Entry
101167788 CDS
T02443
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101167788
Spliceosome [BR:
ola03041
]
Common components
Common spliceosomal components
General mRNP proteins
101167788
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
101167788
NCBI-ProteinID:
XP_004070573
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All DBs
Position
7:complement(16469118..16475135)
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AA seq
516 aa
AA seq
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MADDFDVEAMLEAPYRKEKKEIQARSSNLFGCYKDENKSSHANGHDDHNKKKRKSRSRSR
SPGSRKKKSRSRSKDRKKSKKRSRSRERKQSRSKEHHRSRSRSKDRTGRYKARKSPVRKR
TKSRSPPKKERSPVRQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRI
ISDRNSRRSKGIAYIEFVETSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQK
GSAGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECA
KKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLA
EGTGLKIPPAAQQALQMTGSIPFGNMAAPAIPTPAPSQALNLPSQPLATHCLQLSNLFDP
QAENDPAWASEIQDDVIEECNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGR
WFARKMITAAYVPLPTYHNLFPDSVTAKQLLMPSRR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgactttgatgttgaggccatgctggaagctccatatagaaaggaaaaaaaa
gagatccaagctagatcatctaatctatttggttgctacaaggacgagaacaagtcctct
catgcaaatggacatgatgatcacaacaagaagaagaggaaaagtcgcagcagaagtcgg
agcccaggctcaaggaagaagaaaagtagaagccgaagcaaagacagaaaaaagagtaag
aagagaagccgaagtcgagaaagaaagcaaagtcgcagcaaggagcatcatcgcagccga
tcccggagcaaggatcgtactggacgttacaaagcacggaagagcccggtgcggaaacgg
accaaaagtcgaagccctcctaaaaaagagagaagtcctgtcaggcaacccattgacaat
ttaacacccgaggagagagatgctcgcaccgtcttctgcatgcagctggctgcgagaatc
agagctcgagacctggaagattttttctccgctgtcggcaaagtaagagatgtgagaata
atctctgacagaaactcccggagatccaagggcattgcatacatagaatttgtggagacg
tcgtctgtaccgctggcaatcgggctgacgggtcagaggctgttgggagttcccatcatt
gtccaggcatctcaggcagagaaaaacagagctgcagctgcggccaacaatctgcagaag
ggcagtgcaggtccaatgcgactgtacgttggatcactgcactttaacatcactgaagaa
atgctgcgaggaatctttgagccttttggaaagattgaaggaatccagctcatgatggac
agcgaaacaggaagatccaaaggctatggcttcatatcgtttgcagatgctgaatgtgca
aaaaaggctctggagcagctgaatggctttgagctggctggccgtcccatgaaggtgggg
cacgttacagagcgctccgactcctcaacagctagctcgttcctggataacgatgaacta
gagaggactggaatcgacctcggcacaacaggccgtttacagctgatggctcgactagca
gaaggaactggcttgaagataccccctgcagcccagcaggctctccagatgaccgggtcc
ataccctttgggaacatggctgctccagcaattccaactccggctccaagtcaagccttg
aacctcccatcacagccactggccactcactgccttcagttgtccaacttgtttgaccca
caagctgagaatgatcctgcctgggcctcagaaattcaagatgatgtaattgaggagtgc
aacaagcatggaggagttgttcacatctatgttgacaagaactcaccccagggcaatgta
tatgtcaagtgtccctcaatacctgcagcaatggcaacagtaaacgcacttcacggacgt
tggtttgcacgcaagatgataaccgctgcctatgttcctttaccaacctaccacaacctt
ttcccagactctgtaacggcaaaacagcttctaatgccttctcgtcgatag
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integrated database retrieval system
