Oryzias latipes (Japanese medaka): 101167815
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Entry
101167815 CDS
T02443
Name
(RefSeq) Down syndrome cell adhesion molecule isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101167815
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
DSCAM family
101167815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
C2-set_3
fn3_2
Interfer-bind
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
101167815
NCBI-ProteinID:
XP_020564098
LinkDB
All DBs
Position
13:25025444..25159396
Genome browser
AA seq
2074 aa
AA seq
DB search
MWILAFIFFQSILNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVTVVSWEKDTVSLSSGQRYLITSTGA
LYIVDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPAILDGFDHREVMINH
RVELPCKASGYPTPKYRWLKDNSPLEPDSRFRQTISGLLIESTQPSDSGTYVCEVWNSYG
NAEVVGHLYIKQPLKVVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIMEGMSKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVSP
NEPVFLVCNVKGTPPPRCTWTLDDDPVIKDSHHHLGHYETHEAHVASQLNVTHTQVQDGG
VYRCTCSNSAGVVYHQARINVRGRASIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLSNVQQVDAGEYTCKVMVQPNKMDSQSVHVRVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPASLGVTVDNIDFTSSLRISNLTP
DHNGNYTCIARNEAAVVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPILLNSGSRIQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKRMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVISTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPVVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MIAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLDSTSPQSIKVSWKPPLKHLQNGVIRG
FQVGYREYSPGGSHQFTIISVDTTGDTTESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVVKTLEDVPSRPPENVLAVAKSPEIISLSWMPLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTGQPSLELDSLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ASSSSAVFVSWLPPLKLNGIIRKYIVFCSNLHPMVMSEFEASPDIYFYRIPNLARNRQYS
IWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVVPCKAVGDPPPTIK
WVKGNTNGTPTPVVVDGRRSLHGNGSFIIRTVKAEDSGNYSCVATNTWGSDEVTLNLQVQ
VPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKEHELFTSINSTRARLNLA
GWNNGGCPITSFILEYRAVDSPTWTTAQRTSLTKSYILYDLQEATWYELQMKVTNSAGST
EKRITFATLSTDGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSILVVAVLVFIMLMVLK
RRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDNDFGETTKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHHPTA
RRTAKAGPAPARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVSPS
QDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGT
NDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFL
LNRGVPLPARGGGVSSASGSSSGGGGGGAAGTSGSAAGATGETRGGGGAMGQAILEPQRS
RTLKRPPPMEPTPMEVPSPRDVQQWQPGTASTLPHRDIRERGEARGEVRGDAPSSGDLTQ
AQAAKLSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatctttttccagagcatcttgaatgttttcagtgaagatcta
cattccagtctatacttcgtcaatgcatctctgcaagaggtagtatttgccagcaccaca
gggacctcggttccttgtcccgctgggggcgcaccgcctgcttcgctgcggtggtatctg
gccaccggggaggagatctacgatgtgccgggcatccgccacgtccaccccaacggaacc
ctccaaatcttcaactttctgccatccagcttcagcaagctgatccatgacaacacatat
tactgcactgccgagaacccttctggcaagatcaggagccaggatgtccacatcaaagcc
gtttctcgggagccctacacagtcagggtggctgaccagaaggctatgagaggcagtgtg
gctgtcttcaagtgcattatccctgcttctgtggaggcctacgtcaccgttgtatcatgg
gagaaagacactgtttcactcagctcaggacaaagatatctcatcacatccacgggagcc
ttgtatattgtggacgtcctacctgaggatggcctgaacaactatcgctgcacaactcga
caccgttacactggtgagactcgccagagcaacagtgcgcgtctcatcgtatcagacccc
accaatgctgagccagccatcctggatggctttgaccacagagaggtgatgattaatcat
cgggtggagctgccctgtaaggcctcaggctacccaacacccaagtaccgctggctgaaa
gacaacagccctctggagccagacagtcgctttcgccagaccatctcagggttgctgata
gagagcacacagcccagtgactctgggacatatgtttgtgaagtgtggaacagttatggc
aacgccgaggtcgtgggacacctgtacatcaaacagcccttaaaagtagtggtcagtccc
cgaaaggtgaagggcagcgtgggtagcaaagtgtctctatcctgcagtgtcagtggctca
gatgaatatgagctgtcctggtaccgcaatggagaaatcatctaccccggcaacaacgtt
cgcttcactgggctcaacagggagaaccttatcatggagggaatgtccaaaagcgatgga
ggagcttaccagtgcttcgccaggaagggcaaaatgtcggcacaagactttgtgcaggtc
attcttgaagatgggacccccaaaatcttgtcctccttcagcgagaaggtggtgagcccc
aatgagcccgtcttcctggtctgcaacgtcaagggcacgcctcctcccagatgcacctgg
acgctggacgacgaccccgtcatcaaggacagccaccaccacctgggccattacgagacg
cacgaagcccacgtggccagccagctcaacgtcacgcacacccaggtgcaggacggcggg
gtgtaccggtgcacgtgcagcaactcggccggggtcgtgtaccaccaggctcgaataaac
gtaagaggtcgcgccagcattcgtccaatgaaaaacatcacggccatagctggacgggat
gccttcgttcactgccgtgtgatcggatacccctactactccataaagtggtacaagaac
tccgccctgctgcccttcaaccacagacagcgagcttttgagaacaacgggacactgaag
ctgagcaacgtgcagcaggtggatgctggcgaatacacctgtaaggtgatggttcaaccc
aacaagatggactcccaaagtgtccatgttcgtgtgagagtccctccctacattcaaccc
tttgagttccagcgtttcaccatcggtcagcgggtcttcataccgtgcgtggtcatgtcc
ggagatcgaccactggacatcacctggcagaaagatgggcgccccatccccgccagtctg
ggtgtgactgtcgacaacatcgactttacgagctcgctgcggatctccaatctgacccct
gaccacaatggaaactacacctgcatcgctcgaaacgaagctgcagttgtggagcaccag
agtcagctcatcgttagagttcctcctcagtttgtggtgcagcctgaggatcaagatggg
atctatgggaaaactgtgactctcaactgctctgctgagggctatccaccacccactatt
gtttgggagcactccaaaggtgcaggtgtaccccagtttcagcccatccttctgaacagt
ggctctcgcatccagctactgagcaatgggtcgctgctcatcaaacacgtgctggaggat
gacagcggcttctacctgtgtaaggtcagcaacgacgttggagctgatgtcagcaagtcc
atgtacctcaccgtcaaaatcccggccatgatcacctcctaccctaacaccactctggcc
acgcagggagaggagaagcggatgagctgcatagctcacggggagaaacccatcatggtg
cgctgggagaaagaggagcgcatcatcaacccagagaccagccgctatgtggtcactgta
aaagaagtggctgacgaagtcatctccacgctggtgattatgccaacagttcgtgaagac
tctggattcttctcctgtcatgctatcaactcctttggcgaggatagaggcatcatacag
ctgacagtgcaagaaccccctgatcctccggtggtagagatccgtgaggttaaagatcga
accatagctctgcgctggaccatgggctttgatggcaacagcccaatcacagggtatgat
atcgagtgcaagaacaaatcagcttcatggctatccgctcaagtaaccaaagatgtgtca
ccacagttaaaccaggcaactataattgatctccatccttcttccacttacaacattcgt
atgattgccaagaacatcattggcaacagcaaccccagcaacgagctcaccatcaccact
gatgaagcagctccagatgggcctccacaagatgtcactctggactccacttcgcctcag
agcatcaaagtctcctggaagcctccccttaagcacctgcagaacggtgtgatacgtggc
ttccaggtaggctacagggagtacagccctggtggaagccatcagtttaccattatcagt
gtggatacaacaggagacaccacggagagcattgttttggacaacctgaagaagttcacc
cagtacagcgtggtggttcaggctgcaaacagagccggcacagggccgtcctcacagcaa
gtggtcgtcaagaccctggaagacgtgccgtcccgtcccccagaaaatgtcctggccgtg
gccaagtctcctgagataatctcgctgtcctggatgcctcttcccagagaagctctcaat
gggaatttgcagggctaccgagtcatctactgggccaacctacctgatggagaacttggt
gaaataagaaatgtgaccaccggtcagccgtccctggagttggatagtttggagaagtac
accaactacagcatacaggtcttagccttcaccaatgctggggatggagttcgcagcgaa
cagatctacgttcgcaccaaagaggatgttcctggtcctcctgctggagtgaaggcagca
gcctccagcagctcagctgtgtttgtctcttggctccctcccctcaaacttaacggcatc
atcaggaaatacattgtcttctgctccaaccttcatccaatggtgatgagtgagtttgag
gcgtctccagatatatatttctacaggatcccaaacttggctcgaaacaggcagtacagt
atctgggttgtggctgtgacggctgcaggtcacggcaacaacagtgagaagatcacagtg
gagccgctggccaaagctccagccaggatcctgacctttaacggcactgttaccactccc
tggatgaaggacattgtggtaccatgcaaagctgttggtgaccctcctcccaccatcaaa
tgggtcaagggaaacaccaatgggactcccactcctgtcgtagtggatggccgccgtagc
cttcatggtaatggaagctttattattcgtacagtgaaagcagaggattctgggaattat
agctgtgtggccaccaacacctgggggtcagatgaggtcacactcaacctgcaggtccaa
gtccctcctgaccagccccggctcacagttaccaagacaaccaccacatcaatcacactc
tcatggatacctggagacaacggaggaagctccataaggggttacatcctgcagtactct
gaagataacagtgagcagtggggcagttttcccatcagccctagtgagcgatcttatcgt
ctggagaacttgaagtgtggaacatggtacaaattcaccctgactgcacaaaacgcagtg
ggaccagggcgcatcagtgagataattgaagcaaagactcatgggaaagagccccagttt
gccaaagaacatgaactctttaccagcatcaactccaccagagccaggctcaacctggcc
ggttggaacaatggtggctgtccgatcacctccttcattctggagtacagagctgtggac
tcgcccacctggaccacagctcagcgcacgtcactcaccaagagctacatcctgtacgac
ctgcaggaggcgacgtggtacgagctgcagatgaaggtcaccaacagtgccggctcaacg
gaaaaacggattaccttcgccactctgagtactgatggaagcaccattcctcccttgctg
aaaacaggagaccccatctcagataacatgtcaggcagtggaggtctgaagatggtggtg
accatcacctccatcctcgtggtggctgtgctggtctttatcatgctgatggtgctgaag
aggagaaggagggaacaaaggcttaagagactcagagatgccaaaagcctggcagaaatg
ctgatgagtaagaacacccgaactcccgacacagtgaacaagcagcagcagaccttacga
atgcacatagacatccccagagcccagctcctgattgaggagagggacaccatggagaca
attgatgacaggtcaactgtcctgttgacagataatgactttggagagaccactaagcag
aagtcttccacagtgacccacacagttcactatcagtctctgtctcaagccaccggccca
ctggtggatgtgtccgatgccaggcctggaaccagtgagtcccaccaccaccccactgcc
agacgcactgccaaagctggtcctgccccggcgcggagccgctatgccagccaatggact
ctgaaccggccgcatcccaccagctcctcccacaccctgaccaccgactggagactcccc
accccacgagccaccggatcggtggacaaagagagtgacagctacagcgtcagcccttca
caagacacagatcgtgcacggagcagtatggtgtcaacggagagcgcatcctccacctac
gaggagctggccagagcctacgaacacgccaagatggaggagcagctccgccacgccaag
ttcaccatcaccgagtgcttcatctccgacacctcatcggagcagatgaccgcagggacc
aacgattacaccgacagtctgacctccagcacgccgtctgagtcaggcatctgtcgcttt
actgcttccccgcccaaacctcaggacgtcagcagggtcatgaacatggccgttcccaag
gcacacaggccaggaggggagttggtccatctgccaccctacctccgcatggacttcctg
ttgaaccgtggtgtgcctctaccagcccgaggaggcggggttagtagcgccagtggcagc
agcagtggaggaggtggtggaggggccgcaggaacaagcgggagcgctgctggtgctaca
ggagaaacaagaggtggtgggggagccatgggccaggccatccttgagccgcagagaagc
cgtaccctgaagaggccacctcctatggagcccaccccaatggaagtgccctctcctcgg
gacgtgcagcagtggcagccaggaactgcttccaccctcccgcacagggatatccgggag
aggggagaggcccgaggtgaggttcggggagacgccccctcctcgggagatctaacccaa
gcacaggctgccaagctcagcacctcccaggagtcactactggactccagaggacacctg
aaacagagcaacaacccttatgccaagtcttacactctggtataa
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integrated database retrieval system
