Oryzias latipes (Japanese medaka): 101167885
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Entry
101167885 CDS
T02443
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101167885
04020 Calcium signaling pathway
101167885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101167885
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101167885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
101167885
NCBI-ProteinID:
XP_023816304
LinkDB
All DBs
Position
12:25934231..26156960
Genome browser
AA seq
2407 aa
AA seq
DB search
MARFADDLPSRYGGGAGGGGRGGPGAGRGGARGGGAPGGQRMYKQSMAQRARTMAIYNPN
PVKQNCLTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASD
KTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATV
GSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGV
EFYMGEFHKTCFKSDTDERVADWPCGQEAPARTCPNGTQCKEYWTGPNFGITNFDNILFA
VLTVFQCITMEGWVDILYSTNDVVGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKER
ERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYKRKQN
LSVLKRGKIKKVKNDLMGAEEGEDPFADMSSVAPPSSPFGRASVKSSGKMDSSSYFRRKE
KRIRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTRALYTTEFVFLGLFLTE
MTLKMYGLGARNYFHSSFNCFDFGVIVGSIFEVIWDIIKPGASFGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGHFKTTDSGFGRFNFE
DETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNY
TLLNVFLAIAVDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPMSAANISIAAFV
KQNRDPLSRRSSISSIQSPTYTVYCSPPRHILTYREQHRSSKSMSVWEQRTNQLRRHNMK
SSSEALFSELNPEERLRVSTLLHLHPDMKTHTDRPLVVDGKNGDQTGRPSEGGQEEAEAP
RPDEVGDSFRAHSRKHHRHRDRNGNGGDSRRERHHTHHSRSRENAADGSREGTEGFDAGQ
GCRHHCQASSPEEGAGDGRRGGEPGGHRHHHSRPPREGNGIMGNGAQGECRGRGGDMGDA
IAERRGRNSCKARAQPTLEGGDCRKQGVYREGQVGVEENSPACSPVLQTRSSLTLSEKQE
DADNLKNSTRASHAGLNSNAIRIPVTVTAPPGETIIPMNNTDDDIFQLSEEKKDLDEEEG
TNGPRQILPYSSMFIFGQTNPLRRLCHYVVNLRYFEMCILMVITMSSITLAAEDPVQANA
TRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACS
SLMGSQQSVTRGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNIL
IVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLDYDRDDVTAQPREWKKYEF
HYDNVLWAFLTLFTVSTGEGWPVVLKHSVDATYEDQGPSPGFRMETSIFYVVYFVVFPFF
FVNIFVALIIITFQEQGDKAMSDCSLEKNERACIDFAINAKPLTRYMPENKKSFQYKMWK
FVVSPPFEYAIMTLIALNTIVLMMKFYGAPDLYKSMLKYLNIVFTGLFTLECILKIIAFN
PLNYLKEPWNVFDFVTVIGSITDILFTEINTNKMINLSFLRLFRAARLIKLLRQGYTIRI
LLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEETAINHHNNFQTFFQALTL
LFRSATGEAWHEIMLACLSNRPCDKLSGTTEKECGSDFAYFYFVSFIFLCSFLMLNLFVA
VIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRICYRDMYKLLRFISPPLGLGKK
CPNRVAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDADLRREIN
KVWPNLSPKTADLLVTPHKYNELTVGKVYAAHMIFDYYKQNRAKKLQQQNPTGASQNKLG
ALFRPVLPFTHIHASEPPMPSPKQPLPPQPEPVTKAEAPPTTPSTNADRTSSRDTLLNQR
NTIKHSQSGDVSQASQRPKARRRLQRGQSEDVQYSSKPQEQLELRQVEIISDSERFPSLE
SHCRAASLPRLNAEHHRSHPRHAPGTHLAPIVDLSPIKRSASSLTPQSHREVELRDYDLE
RDGQLPAGPGQIQEEERVHHHHHHHRCHRRRDKDREKKHRSLEKAASGQPGSTTDPSADV
FPRERPRERDRSRPLERRHHSSAGEKQRYYSCERYGSRESCQARSAGPSRSASPGEGQDS
GSLKQQVSGAAKVAPPTGTSTAGRGRRQLPQTPLTPRPGVAYKTASSSALQGSGVASGHQ
ARLSRGLSEHDRHPVGHSEGLLSITCMGSDPNLNRQHLDSSRQALFGESEDFQDALSSHG
GGRFANTAASSTTLQRGAAEAATATTMQGRAAGVPNGYHFTLGVNAASGSGNRGTGNLRE
REKDDWC
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagatgatcttcccagccggtatggaggaggcgcgggcggcggaggg
agagggggcccgggcgctggccgagggggcgcccggggtggcggcgctccgggcggccag
aggatgtacaagcagtcaatggcccagagagcccggaccatggccatctacaacccgaac
cccgttaagcagaactgcctcactgtcaaccgctcccttttcatcttccgcgaggacaac
ctcatcaggaagtacgccaagcggataacagagtggcctccctttgagtacatgatcctg
gctacaatcatcgccaactgtatcgtcctggctttggagcaacatttaccagcaagtgac
aagacgccaatgtcagagcgcctggatgacacagagccctactttattggaatattctgt
tttgaggctgccattaagatcattgccctgggctttgcttttcacaaaggctcctacctc
cgcaacggttggaatgtaatggacttcgtggtcgtccttacggggattctcgccacggta
ggatcggattttgacctacggaccctgcgagctgtgagagtgctgaggcccctgaaactg
gtgtcaggaatccccagtcttcaggtggtgttgaagtctataatgaaagccatggtgccg
ctgcttcagattggcttgctgctgttctttgccattgtgatgtttgctatcatcggtgtg
gagttctacatgggagagttccataaaacctgcttcaagagcgacactgatgagagagta
gctgactggccttgtggtcaggaggctccagccaggacttgtcccaacggaacccaatgc
aaagagtactggactggacccaactttggcatcaccaacttcgacaacatcttgtttgcg
gtgctaactgtgttccagtgcatcactatggagggctgggtggacatcctctacagcacc
aatgatgtggttggaaacacgtggaactggctctacttcatccccctcatcatcatcggc
tcctttttcatgctcaacctggtgctcggcgtcctatcaggagaatttgccaaagagcga
gagcgtgtggagaagaggcaggagttcctgaagctccgtcgacagcagcagattgagagg
gagctcactggatacttggagtggatctgcaaagcagaagaggttttgctggaggaggaa
gatgagattgcagaggaaaagtcaccgctggacggtgcctggtacaagaggaaacagaat
ctttcagttctgaagcgaggcaagatcaagaaagttaaaaatgacttaatgggtgcggag
gagggagaggatcctttcgccgacatgtcctctgttgctcctcccagctctccgtttggt
cgggcgagtgtgaaaagcagcgggaagatggacagctcctcctacttcaggcgtaaagag
aaaaggatccgcttcttcatccgccgcatggtgaaggcccaaagtttctactggatcgtt
ctgtgcttggtgggcctgaacactctttgtgtggccatcgtccactacgaccagcccgag
tggctgacaagagccctctacacaaccgagtttgtcttcttgggtttgttcctgactgag
atgactctgaagatgtacggccttggagccagaaactactttcactcctccttcaactgc
tttgactttggggtgattgtgggaagcatcttcgaggtgatctgggacatcattaaacca
ggagcttcgtttggcatcagcgtgctaagggcccttagacttctcaggatttttaaagtc
accaaatattggaactcactgaggaatcttgtggtttccctcctcaactccatgaagtcc
atcatcagtttgcttttcctcctcttcctcttcatcgtcgtctttgccttgctgggcatg
cagctctttggaggacatttcaagaccacggactcaggttttggcaggtttaattttgaa
gatgagacaccaacaacaaactttgatacttttcctgcagcaattctcactgtgttccag
atcctgaccggtgaggactggaacgccgtgatgtaccatggcattgagtcccagggaggc
gtccgccgtggcatgttctcctccatctactttattgttctcactctctttggaaactat
accctcctcaacgtcttcctggctatcgctgtggacaatcttgcaaatgcccaggagctg
acgaaggatgaagaggagcaggaagaggcggccaataagaagctggcactgcagaaggcg
ttggaagtgaaggaagtcagccccatgtcagctgccaacatttcgattgctgcttttgta
aagcaaaatcgagatccgctctctcgcaggtcgtccatcagcagcattcagtcaccgact
tatactgtctactgctctcccccccgacatatcttaacctacagagagcagcaccggtcc
tcaaagagtatgtcggtgtgggagcagaggacgaatcagctgaggaggcacaacatgaag
tccagtagcgaggcgctcttcagcgagctcaaccctgaggaacggctccgggtctccacc
ctccttcatctgcaccccgacatgaagacgcacacggaccggccgcttgtggtagacggc
aagaatggagaccaaaccggcagaccatctgaaggaggccaggaggaggcagaggctccc
aggccggatgaggtgggggacagcttccgtgctcattccaggaagcatcaccgccatcgg
gataggaatggaaacgggggggatagcagacgagagagacaccacacacatcacagcagg
agccgagaaaatgcagcagatggttcgagagagggaacggagggctttgatgcggggcag
gggtgcaggcaccactgccaggccagctctcccgaggagggggccggtgacggacgccga
ggaggggagccaggagggcaccgtcaccatcactctcgacccccaagagaaggaaatggg
atcatgggaaacggcgctcagggagagtgcagaggcagaggaggggacatgggagacgcc
atcgcagagaggagggggcgtaactcctgcaaggccagagctcagcccaccctagaaggg
ggtgactgcagaaagcagggggtgtacagggaggggcaggtgggtgtggaagagaacagc
cccgcctgcagtcccgtgctacaaacgcgcagcagcctgaccttgagcgaaaagcaggag
gatgccgacaacctgaagaactccaccagggccagccatgcgggccttaacagcaacgcc
atccgcatccccgtcactgtcaccgccccccctggagaaaccatcataccaatgaacaac
actgacgatgacatcttccaactgagcgaggagaagaaggatctggatgaagaggaggga
actaacgggccccggcagatccttccctacagctccatgttcatcttcggacaaacaaac
ccgctaaggcgcctgtgtcattatgtggtcaacctccgctattttgaaatgtgcatcctg
atggtcatcaccatgagcagcatcaccctggcagctgaagaccccgtccaggccaacgca
acgcgcaacaacgttcttaagtatctggattatgtcttcactggagtcttcacctttgag
atggtgattaagatgattgacctgggtctgctccttcatccgggctcctacttccgtgac
ctgtggaacattctagacttcattgtggtcagtggagctctggtggcctttgcctgctcg
agtcttatgggatcacagcaaagcgtaaccagggggaccaaaggcaaggacatcaacacc
atcaagtccctcagggtcctgcgagtcctgcggccgctcaagaccattaaacggctgcct
aagctgaaggctgtgtttgattgtgtcgtaaactctctgaagaacgtcctcaacatcctc
atcgtctacatgctcttcatgttcatcttcgctgttatcgcggtgcagctcttcaagggt
aaattcttttattgcacggacgagtccaagggcctggagaaggactgcaggggtcagttt
ttggactatgaccgagacgacgtgacggctcagcccagagaatggaagaagtacgagttt
cactatgataacgtcctctgggcctttctgactctcttcaccgtgtccactggagaaggc
tggcccgtggtcctaaaacactctgtggatgccacatacgaggatcagggacccagccca
ggcttccgcatggagacctccatcttttacgtggtctactttgtggtctttcctttcttc
tttgtcaacatatttgtggccttgatcatcataaccttccaggaacaaggagacaaggcc
atgtcggactgtagcttggagaaaaatgagagggcctgtattgactttgccatcaacgcc
aagcccctgacacgttacatgccagagaacaaaaagtccttccagtacaagatgtggaag
tttgtggtctcgccgccgtttgagtatgccatcatgactttaatcgctcttaacaccatt
gtgctaatgatgaagttctatggagcgccagacctgtataagtcaatgctgaagtacctg
aacatcgttttcactggcctcttcacactggagtgcatcctcaagattattgccttcaac
ccactgaactacctgaaggaaccctggaacgtcttcgactttgtgactgtgattggaagc
atcaccgacattttgttcacagagataaatacgaacaagatgataaacctgagtttcctg
aggctgttcagagcagctcgcctcatcaagctgctgcggcagggctacaccatccgcatc
ctgctgtggaccttcgttcagtcttttaaggctctgccatacgtctgcctgctcatcgcc
atgctgttcttcatctacgccattatcgggatgcaggtgtttggaaacatcgagttgaac
gaggagactgccatcaatcaccacaacaacttccagaccttcttccaggctttgactctt
ctgttcaggagcgccacgggcgaggcgtggcacgagatcatgctggcctgcctcagcaac
cggccgtgtgacaaactgtcaggaaccacggagaaggagtgcggcagtgacttcgcctac
ttctactttgtctccttcatcttcctctgctccttcctgatgctaaacttgttcgtcgcc
gtcatcatggacaactttgagtacctgacccgggacgcctccatcctggggcctcaccac
ctggatgagttcatccgcgtttgggcagaatatgacccagctgcctgtgggaggatttgc
tatcgggatatgtacaaattattgcgttttatctcgcctcccctgggcctgggcaagaag
tgccccaacagggtggcctacaagcgactggtaaagatgaacatgcccattgcggacgac
aacactgttcatttcacttccacgctgatggctctgattcgcaccgccctggagatcaaa
cttgcatctggggtcctggcacagagactttgtgatgctgacctgcgaagggagataaac
aaagtttggccaaacctgtctccaaaaactgccgacttgctggtgacgccgcataaatat
aatgaactgactgtggggaaagtgtatgcagctcatatgatctttgactactacaagcaa
aaccgagccaagaaactccagcagcagaaccccacaggagcgtcccagaataaactgggg
gccctgtttcgtcctgtcctgcccttcactcacatccatgcttcagagcccccgatgcca
agccccaaacagcccctcccacctcagcctgagccagtcaccaaagcagaggccccgccc
acaactcccagcaccaatgccgacaggacatccagcagagacacattactgaaccagaga
aataccataaagcactcccagtctggagatgtttctcaggcatcacagaggcccaaagcc
cggaggagactgcagagaggccagtctgaggacgtgcagtactcctcaaaaccacaggaa
cagctggaactgaggcaggtggagattatttctgactcggagagatttccgagcctggag
agccactgcagagcagcctcgctgccccgactcaatgccgagcaccaccggagccaccct
cgccacgcccccgggacccacctggcacccatcgttgacctcagtcccataaagcgctcg
gcgtcctcgctgacgcctcaaagccaccgcgaggtggagctgagggattacgacctggag
cgtgacggtcagctcccggcaggaccagggcaaatccaggaggaggaaagggtccaccac
caccatcaccaccaccgctgccaccggcgcagggacaaggacagggaaaagaagcacagg
tctttggaaaaagcagcatctgggcaaccaggcagcaccacagacccctcagccgacgtt
tttcccagagaaagaccgagagagcgggatcgcagtcgcccccttgaaagaaggcaccac
tcttctgcaggggagaagcagcgctactactcctgtgaacgctatggcagcagagagtcc
tgccaggcccggtcggccggccccagccggtccgcatctccaggagaaggccaggactct
ggctccctcaaacagcaggttagtggtgcggctaaagttgctccccccactggtaccagc
acggcaggtcgagggcgccggcagctccctcagacccccttaacacctcgtccaggcgtg
gcttacaagactgccagctcctcagctctgcaaggcagtggtgttgcgtcgggacaccag
gctcgcttgagccgtggcctttcagagcatgaccggcatcctgtgggccacagcgagggc
ctgctgtccatcacctgcatgggttcagacccgaacttaaacaggcagcacctggactcc
tctcgacaggctctcttcggagagtcagaggacttccaggatgctttgagcagccacgga
ggaggacgctttgccaatactgctgcttcctccacaaccttgcagcgcggtgctgctgag
gctgccacagccaccaccatgcagggacgcgcagcaggcgtgcccaacgggtaccacttc
accctcggtgtcaacgctgcttctggaagtgggaacagagggacggggaacctcagggag
agggagaaagacgattggtgctga
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