Oryzias latipes (Japanese medaka): 101167943
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Entry
101167943 CDS
T02443
Symbol
arhgef18
Name
(RefSeq) rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101167943 (arhgef18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101167943 (arhgef18)
Membrane trafficking [BR:
ola04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101167943 (arhgef18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
PH_13
SOS1_NGEF_PH
DBL_C
Motif
Other DBs
NCBI-GeneID:
101167943
NCBI-ProteinID:
NP_001265789
UniProt:
I1U3D6
LinkDB
All DBs
Position
4:8179105..8220776
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AA seq
1058 aa
AA seq
DB search
MTVGLLGPSSQLSAVPYSCSFGSSTCSLGHSLQQHTNSGSLSGEMDETDAFRIERCNEDI
ISLAPSTTESIFDEDAHYAAVRADLELDAQDLEAESWSSAVDQQYLKKHSKDTIKRQDVI
YELMQTEMHHVRTLKIMLRVYVRELRDNLQMDSSRLDCLFPRLENLLDLHAHFLSRLKER
RRENLESPSNKNYMINRVADILITQFSGEIGEKMKDSYGNFCSHHTEAVGYYKDQLHNNR
RFQSTIRKISNLSIVRRLGVTECILLVTQRITKYPVLVERILQYTEGGTEEHEDLTRALG
LIKDAIVQVDSMVNLYEKNTRLRDIQNKMEPKALGKIKGGRVFRREDLAMGRRRLLHEGT
VSWKAASGRLKDILAVLLSDVLVLLQEKDQRYVFATVDNKPSVVSLQKLIVREVAHEEKA
MFLICASSNEQEMYEVHTTSKEERNSWITVIRQAVESCPHTEERLFSEEEEARASRLKEF
QERLSQKDAVIVQALTEKLQLFAEMTESVSGLEDAGSRSRLLLRGDTSDLQQGETLLKAA
ITEVENLQNLLQSEKREEAQPLRTEEGGGPGLLPRRADTFGGYDCNSSTQNGIVKKNFPG
ESRSRDRSQRASSDPQIKELCGGHTLQQTVESRASSARWSWMWSRSFPKTELIGSVLMLS
QSLYSLQAIISQQDSHIELQRASLTERASMPSRHRGNVLLEQEKQRTLALQREELATLHK
LQSQHRQEQQRWERERERHRQQVEATEARLQQREEECRRLEEHLAKEKEELDRQRETYQQ
DLERLRESTRTVEKEKERLENLKKIKRKTIEVAPLNGELLSGLSSSSMDAQPPHKPLVRG
SLSVAPADYTERPEVAVRREAGSSGPALKTEVPLHLFSTTNQLHKPVGVQQQIPTKLAAI
NSGKGKGGKTGKATHRTDSSSSVDMKQMLPLRLSAREDGVVKAKRSVSPHQPLSTHHHTD
LQVPPDSSGVDPQPTSSLSSSYPPNLQKPPVHLAHSQPSMHPGATAAAAVTSHSSGSLQF
QPSVQLQSFNPVPGLGHGAPPPYAGTTEELSKEDVIFF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttggtctgttgggacctagctctcagctgtctgctgtgccgtactcttgctcc
tttggctcctctacctgcagccttggccacagcctccagcagcacaccaactcaggatcc
ctgtctggggagatggatgagaccgatgctttccggatcgaacgctgcaatgaagacatc
atttctctcgctccttcaaccaccgagtccatctttgatgaagatgctcactatgcagcg
gtccgtgccgacttggagctggatgctcaggacctggaggcagagtcctggagctcagca
gttgaccagcagtatctaaagaaacactcaaaagacaccattaagaggcaggatgtgata
tatgagctgatgcagacggagatgcaccatgtccgaacactgaagataatgctgcgcgtg
tacgtcagagagctgagggacaacctccagatggactccagcagactggactgtttgttc
ccacgcttggaaaacctccttgaccttcatgcacatttcctgtcgcgcctcaaggagcga
cgaagagaaaacctggagtctcccagcaacaagaactacatgattaacagagtggccgac
atcctgatcacacagttctctggagaaataggggagaagatgaaggacagttatggaaac
ttctgcagtcaccacaccgaagcagtcggctactacaaggatcagctgcacaacaacaga
cggtttcaaagtactatacggaaaatcagcaatctgtccatcgtgcgacggctaggtgta
accgagtgcattctgttggtaacgcagaggattactaagtacccagtccttgtggagcgc
attctacagtatactgaagggggtacagaagagcatgaagacttgactcgggctctgggt
ctgatcaaagacgccatcgtgcaagtggactcaatggttaacctctacgaaaaaaacact
cgacttcgagacattcaaaacaagatggagccaaaggcgctggggaaaatcaaagggggg
cgggtgtttcgcagggaggacctcgccatgggccggaggcgactgcttcatgagggcacg
gtcagctggaaagctgcctccgggagactcaaagatattcttgccgttcttctgtcagat
gtgttggttttactgcaagaaaaggatcaaagatatgtatttgctacagtggacaacaag
ccctcagtggtttctctccaaaagctgattgtcagagaagtagcccatgaagagaaagcc
atgtttctcatctgcgcctcgtccaatgagcaagagatgtatgaggtacacacaacttct
aaagaagagcgaaactcctggataaccgtcattcgacaggctgtagagagctgtcctcac
acagaggagagactgttcagcgaggaggaagaagcccgagcttccaggctgaaggaattt
caagagcggctgagccagaaggatgctgtgatcgtccaagctctgaccgagaagctgcag
ctgtttgcggaaatgaccgagtccgtgtccggtctggaggatgccggttcacgctccaga
ctgctgcttcgaggagacacctcggacctccagcagggggagacgttgctcaaagcggcc
atcactgaagtggagaacctacagaacctccttcagtcagagaagagagaggaggctcag
cctttacgtacagaagaaggaggcggtcctgggctcctccccaggcgagcagacaccttt
ggcggttatgactgcaactcctccactcaaaatggcatcgtgaagaagaactttccggga
gagtccagaagcagagacaggagccagagagccagctccgaccctcagatcaaagagctc
tgcgggggccacacgctgcagcagacggtggagagtcgggcttcttctgctagatggagc
tggatgtggtcaaggtccttcccaaagacagaacttattggcagtgtgttgatgctctcc
cagagcctttatagtctgcaggccatcatatcgcagcaggacagtcacatagagctgcaa
agggcctccctgactgagcgggcctccatgcccagccgccacaggggcaacgtcctgctg
gagcaggagaaacagcggaccctggctctgcagagagaggagctcgccaccctgcataaa
ctgcagtctcagcaccgacaggagcagcagcgctgggagagggagagggagaggcaccgg
cagcaggtggaggccaccgaggccaggctgcagcagagagaggaggagtgcaggcggctg
gaggaacatctagctaaagaaaaggaggagctggaccgacagagggagacgtaccagcag
gatctggagaggctgagagagtccaccagaaccgtggagaaagaaaaggaacgtctggag
aacctgaagaagatcaagagaaagaccattgaggtggctcctctgaacggggagctcctg
tccggcctttccagctcctccatggacgcgcagcccccccacaagcctttagtgcgcggc
agcctgtcggtcgctcctgccgactacacggagcggcccgaggtggcggtgcggcgggag
gccggctcgtccggccccgccctgaagacggaagtgccgctgcatctcttcagcaccacc
aaccagctgcacaaaccggtgggggtgcagcagcagatccccaccaaactggcagcaatc
aacagcggcaaaggcaaaggaggcaagaccgggaaagcaacgcaccgcacagacagctct
tcctcggtggacatgaagcagatgcttcctctgagactgtctgcccgggaggacggcgtg
gtgaaggccaagcgctccgtcagcccccaccagcctctctccacgcatcaccacacagat
ctgcaggttcctccagacagcagcggcgtggacccccagcccacctcctccctcagctcc
tcctaccctccgaacctgcagaagccccccgtgcatctggcacactctcagccctccatg
caccctggcgccaccgccgccgccgccgtgacctcacacagctctgggtccctccagttc
cagccgtccgtgcagctgcagagcttcaacccggttcccgggctcggccacggcgccccc
ccaccctacgcagggaccacggaggagctgagcaaggaggatgtcatctttttttaa
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