Oryzias latipes (Japanese medaka): 101167951
Help
Entry
101167951 CDS
T02443
Symbol
msx1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101167951 (msx1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
101167951 (msx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
RNA_pol_Rpb1_R
DUF7645
Motif
Other DBs
NCBI-GeneID:
101167951
NCBI-ProteinID:
XP_004069233
UniProt:
H2MQB9
A0A3P9KSB5
LinkDB
All DBs
Position
5:complement(30683522..30685352)
Genome browser
AA seq
275 aa
AA seq
DB search
MAPSTAMSALTAALKTEDLSPRAAVVNMQTSLEDSGKPKVAILPFSVEALMADRKPSREA
SSPDSAAGTSQALGKGARIASFGGLDTSGSALPTSSPFSVGEIMNMSEDVMIKAESPDSK
ERTSWIQSPRFSPTSPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIA
ERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGISFPLGAHV
PASYAGSHPFQRHSLPVSPVGLYAAHVGYSMYHLA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgaccgccatgtccgctctgactgctgctctgaagacggaagacctctcc
ccccgcgcggctgtggtgaacatgcagaccagtctggaggactccgggaagcccaaagtg
gcgatcctgccgttcagcgtggaggcgctgatggctgataggaagcccagcagagaggcg
tcctctccggattctgcggccgggacgtcccaggcgctggggaagggcgcgcggattgcc
tccttcgggggtttggatacttcaggttccgctttacccacgagctctccgttttcagtg
ggcgagatcatgaacatgtcagaggacgtgatgattaaggcagagagcccggacagtaag
gagaggacttcgtggattcagagtccgcgattctctccgacgtctccgagacggttgagt
ccccctgcctgtcccctgagaaaacacaagacgaaccgaaagccccgaacccccttcacc
acgtcccagctgctcgccctggagaggaagttccggcagaagcagtacctttccatcgcg
gagcgcgcagagttctccagctccctcaacctaacggagactcaggtcaaaatctggttc
cagaatcggagggccaaagccaagcggctgcaagaggcagagctggaaaaactgaaaatg
gcagcgaagcccatgctgcctccagccttcgggatatcatttccactgggtgcgcacgtc
cccgcgtcttacgcgggctcgcacccgttccagaggcactcgctgccggtgtctccggtg
ggactctacgccgcgcacgtgggatacagtatgtaccacctcgcctga
DBGET
integrated database retrieval system
