KEGG   Oryzias latipes (Japanese medaka): 101167953
Entry
101167953         CDS       T02443                                 
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04510  Focal adhesion
ola04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101167953 (lamb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101167953 (lamb1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 Alanine_zipper F5_F8_type_C Plasmid_RAQPRD RAC_head
Other DBs
NCBI-GeneID: 101167953
NCBI-ProteinID: XP_023811308
LinkDB
Position
6:complement(5737860..5783752)
AA seq 1808 aa
MLALVLVPGRRSGMNIMALLHTFLLLALHSSTWAQEGVASVDGVLENVGLPEFSDVCTEG
SCYPATGDLLIGRAHQLFATSTCGVTRPEPFCIVSHLQEEKKCFLCDSTVPFEERANHTN
SHRVENVVTTFGPNRLKTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIER
SADFGKTWQVYRYFAYDCESAFPSVPQGPMQKVDDVICDSRYSDIEPSTEGEVIYRVLDP
AFRIDDPYSPRIQNLLKITNLRVKFTKLHTLGDNLLDSRIEIKEKYYYAVYDMVVRGNCF
CYGHASECAPVLGAGQTMEGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNAC
KRCNCNQHSDACHFDMAVFVASGGVSGGVCDNCQHNTAGHKCEQCKPFFYQHPERDARDP
NICQPCNCDPLGSVNGGLCDGMTDIRAGLIAGQCRCKVNVEGERCDRCRPAHYGLSDEPE
GCKACTCSPLGTAPGGNPCDSQSGNCFCKRLTTGQDCDQCVPEHWGLSNDVDGCRPCDCD
LGGAIHNQCDQMSGQCVCRDHMFGRRCDQIESGFYFSTLDHYTYEAEDAKFGPGVMLVPR
PHPQDRSPTWTGIGLVNVPEGAFLEFSVDNIPYSMEYSILIRYEPQLPDQWEEVLMTVMR
PGPIRADSRCINTVPDEDNQMTSLQSGSRNVVLPRPVCFESGLNYTIRLSLPRYSALGDV
QSPYTLIDSIVLMPYCQNLDMFTASEGGESSSWEIFQRYRCLENSQSVVKTPMTDICRNF
IFRISALLHQGAKECQCDPQGSLSTVCDPNGGQCRCRPNVVGRSCDRCAPATFQFGPSGC
IACECNPLGSQSPFCDQLTGQCGCVVGAYGRQCDRCLPGHWGFPACRPCSCNGHAETCDP
DTGSCLHCRDHTAGHSCERCLDGYYGDPVLGSGDHCRPCMCPDGPESLRQFAGSCFRSDD
SQQAVCVCSTGYRGPRCDECSPGFYGSPSEVGGQCVPCRCNNNIDMLDPESCDRQSGECL
RCLYYSEGTACQDCKLGYYGNALLQDCRKCVCNKLGTSPSSCSSSGDCHCNRSSGQCPCL
PNVTGQYCDRCAPDTWNMASGLGCQSCDCDPKHSYGTSCNQISGQCSCHPGFGGRTCNEC
KELFWGDPEVKCYACDCDPRGISEQQCNKANGRCVCVEGVSGPRCDTCARGFSGVFPDCQ
RCHQCFAEWDDVIGQLTNQTHRLVNKVNALRTSGVSGPHKKFFDSMQKSAAEIQVVLDQN
LASQPLTELQQLLQQASDLMGSLSQTLNRTEQTFVELEDQNSVTKTEVDSLMSDTQKLDE
TVQELQLQVQFIKNSNIRGASDSITKYFLKSQAAEARANASTVDSGSPTELSAELHRLTL
DTLNQTQEEFMSRHTEHAQNLDQLAGELQTLDLSWINQKMCGGPSNAQDSCRSSCGGLGC
EGKGGCGGEGCDGAVTTANNVLMRVEESEREIASALEEVDQLSKMVLEAKLQADEAKLSA
QNVLNNANRTKLKVDRSNEELRSLIRHIRDFLTQDAADPDSIEHVANEVLALQMPTTPAQ
LQNLTEEIRLKVGELGNVESILEQSAENIQRAEALLEQARHAREEAAGVKDSAEKVKHVL
EEVQKAQTSVGSAIQQAAAEIQNTKELLSSVEIETASAELKVNNATVRLQRLDEDVMLLK
SKNWNVSRSANMTSQDAAIIQSMADEVKQELQSGLKQKVSTVEQLIDQKAVGVAQAKDRA
ESLQKEAKELLLQAADKLQLLKDLEKSYEDNQHILEVKAEQLVELEAAVKELLQDISHKV
SVYSSCLF
NT seq 5427 nt   +upstreamnt  +downstreamnt
atgcttgctctggtcttggttcccggtcgtcggtccgggatgaacatcatggcgcttctg
cacacctttctgctgcttgcgctgcattcgtccacctgggcccaagagggcgtggcctca
gtggacggggttttggagaatgtgggtcttccggagttcagcgacgtgtgcactgaaggc
agctgttacccagcaacgggtgaccttctgattggccgagcccatcagctgtttgccact
tccacctgcggtgtgacgcggcccgagcctttctgcatcgtcagccacctgcaggaggag
aaaaagtgttttctgtgcgactccacggtgccgttcgaggagcgggccaaccacaccaac
agccatcgcgttgaaaacgtggtgacgacgttcggcccaaacaggctgaagacctggtgg
cagtctgagaacggtctggagaatgtcaccattcagctgaaccttgaggcagagtttcac
ttcactcatctcatcatgaccttcaagacgttccgacctgctgccatggtgatcgagcgc
tcagcagacttcggaaagacttggcaggtttaccgctactttgcctacgactgcgaatcg
gccttcccttcagttcctcagggtccgatgcagaaggttgacgatgtcatctgtgactcg
cgctattctgacattgagccgtccactgaaggagaggtgatttacagagttttggacccg
gcatttcgaatagatgacccgtacagtccacgaatccaaaatctgctgaaaataaccaat
ctgcgagtcaagttcaccaagcttcatacactgggcgacaacctgctggactcacgcata
gagatcaaagaaaagtactactacgctgtctacgacatggtggttagaggaaactgcttc
tgttatggacacgcctctgagtgtgcccccgtcctgggagctggccagaccatggagggg
atggttcatggtcactgcatgtgtaaccacaacactaaaggcctcaactgtgaacagtgc
caggacttctaccacgaccttccctggagaccagccgaaggacgcaacaccaacgcctgc
aaaaggtgtaactgcaaccagcactctgacgcgtgtcactttgacatggcggtgtttgtg
gcttctgggggtgtcagtggaggagtttgtgacaactgccaacacaatacagcaggacac
aaatgtgagcagtgtaaaccattcttctaccagcatcccgagagagacgccagagacccc
aacatctgccagccctgtaactgtgatcccctgggctcggtgaatggaggactttgtgat
ggaatgacggacatccgggctggtctcatcgctggacagtgtcgctgtaaagtgaacgtg
gagggcgagcgctgcgaccgctgcaggccggcacattacgggctaagcgacgagcctgaa
ggttgtaaagcgtgtacctgcagtcctctgggaactgctcctggaggaaacccatgtgac
agccaatcaggaaactgcttctgcaaacgtttgacgactggacaagactgtgaccagtgt
gtgcctgaacactggggtctgagtaatgacgtggacggctgcagaccctgtgactgtgat
cttggaggagcgatacacaatcagtgtgaccagatgagcgggcagtgtgtttgcagagat
cacatgtttggtcggcgttgtgatcagattgagtctggattctacttcagcactttggac
cactacacctatgaagccgaagatgccaagtttggacctggggtcatgctggtcccgagg
ccccatcctcaggatcgcagtcccacatggacgggtatcggcctcgtcaatgttccagaa
ggtgcctttctagagttctctgtagacaacatcccatactccatggagtacagcatcctc
atccggtacgagcctcagctcccggaccaatgggaggaggttctgatgacagtaatgagg
cctggaccaatcagagcagacagccgctgtatcaacactgtgccagacgaagacaaccag
atgacctccctgcagtccggctcacggaacgtggttctccccagaccagtgtgcttcgag
tcaggcttgaactacacaatccggctcagtctgcctcggtactcggccctcggggatgtc
cagtctccatacacactcatcgactcgattgtgctgatgccgtactgtcagaacctggac
atgttcacggcctcagagggaggagagtccagcagctgggaaatctttcagcgttaccga
tgtctggagaacagccagagtgtggtgaagactccaatgaccgacatctgcagaaacttt
atctttaggatttcggctttgctgcatcagggagccaaagaatgccaatgtgaccctcag
ggctcgctgagcacagtgtgcgatcccaacggcggtcagtgccggtgtcggcccaacgtg
gttggccggagctgtgaccggtgtgctcctgctaccttccagttcggacccagtggctgc
atagcatgtgagtgcaacccactgggctctcagagtccgttctgtgatcagctgaccggc
cagtgcggctgtgtggtcggtgcgtacggtcggcagtgcgatcgctgcctgccaggtcac
tggggcttcccggcttgccgaccctgttcctgcaacggacacgccgagacctgtgacccc
gacactggcagctgcctccactgcagagaccacactgcgggacacagctgtgagaggtgt
ctagatggttactatggtgacccagtactggggtcaggtgaccactgtcgtccctgcatg
tgtcctgatggtccagagagtttgcgtcagtttgcaggaagctgtttccgtagcgatgac
tcccagcaggccgtatgcgtttgcagcactggatacagaggacctcgctgtgatgagtgt
tcgccgggtttctatggaagcccaagtgaggtcggagggcagtgtgttccctgtcggtgc
aacaacaacatcgacatgctagaccctgagtcctgcgaccgtcagagtggggagtgtctg
cgatgtctctactacagcgagggcacagcatgccaggactgtaagctgggttactatggc
aacgcattgctgcaagactgtcggaaatgtgtgtgtaacaagctgggcaccagcccgtcc
agctgctcctcgtctggagattgtcactgcaaccgcagcagcggtcagtgtccctgcctg
cccaacgtgaccggtcagtattgcgaccgctgtgcacccgacacctggaatatggcaagc
ggcctcgggtgtcagagctgcgactgcgaccccaagcactcgtacgggacgtcctgcaac
cagatcagtggtcagtgttcctgccatcctggctttggaggaagaacctgcaacgagtgt
aaagagctgttctggggagaccctgaagtcaaatgttacgcctgcgactgcgacccccgc
ggcatctcggagcagcagtgcaacaaagccaacggtcgctgcgtgtgcgtggagggcgtg
tccgggccgcgctgcgacacctgtgcccgcggcttctctggagttttccccgactgtcag
cgttgccaccagtgtttcgcagagtgggatgatgtcatcggccagctgaccaaccagacg
caccgactggtcaacaaagtcaacgctcttagaaccagtggcgtgagtggaccacataag
aagttctttgacagcatgcagaaaagtgctgcagagatccaggtggtcctggaccagaac
ctagcctcacagccgctgacggagctccagcagctgctgcagcaggccagtgacctgatg
ggctcgctgagtcagactctgaaccgcactgagcagacgtttgtggagctggaggaccag
aactctgtgaccaagactgaggtggactctctgatgtcagacactcagaaactggatgaa
acggttcaggagctgcagctgcaggtccagttcatcaagaactccaacatccgaggagca
tctgacagcatcactaagtacttcctgaagtctcaggcagcagaagctcgagctaacgcc
tccactgtggactctggcagccccacagaactttctgcagagctgcaccggctcactctg
gacactctgaatcagacccaggaggagttcatgagccgacacactgagcatgcccagaac
ctggaccagctggcaggagagctgcagactttggacctgtcgtggattaaccaaaagatg
tgtgggggtccttcgaacgctcaggactcgtgccgctcctcttgtggtggtctgggctgt
gaggggaagggtggatgtggaggagaaggctgcgacggcgccgtgaccaccgctaacaac
gttctgatgagggttgaagagtctgagcgggaaatcgccagcgccctggaggaagtggac
cagctctccaagatggtgctggaagccaagctccaggcagatgaggccaaactgagcgct
cagaacgtcctgaacaacgccaacagaaccaaactcaaagtagaccggagcaacgaagag
cttcgcagtctcatccgacacattcgagacttcctcacacaggacgctgcagacccagac
agcattgaacatgtggccaatgaggttctagctctgcagatgccaaccacaccggctcag
ctccagaacctcaccgaagagatccgactgaaagtgggggagctgggaaatgtggagtcc
atcctggagcagagcgctgagaacatccagagagctgaggccctgctggagcaggcccgc
catgccagggaagaggcggctggtgtgaaggactctgcagagaaagtgaagcacgttctg
gaagaggttcagaaagctcagacatcggttggcagcgccatccagcaggctgctgccgaa
atccagaacaccaaagagctgctgtcttccgtggaaatagaaacagccagtgcagagctg
aaggtcaacaatgcaaccgtaagactacagagactggatgaagacgtgatgctgctgaag
agcaagaactggaatgtcagcaggagcgccaacatgaccagtcaggacgctgcgatcata
cagagcatggcagacgaggtcaaacaggagctgcagtcagggctgaagcagaaggtcagc
accgtggagcagctgattgatcagaaggcagtgggagtggctcaggcaaaggacagggcg
gagtcactgcagaaggaggcgaaagaactgctgctgcaggcggctgacaagcttcagctt
ttaaaagatcttgaaaagtcttatgaagataaccagcacattttggaggtgaaagctgag
cagctggtggagttggaagctgcagtcaaagagctgctgcaggacatcagccacaaagtc
agcgtgtacagcagctgcctgttctag

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