Oryzias latipes (Japanese medaka): 101167953
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Entry
101167953 CDS
T02443
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101167953 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101167953 (lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
Alanine_zipper
F5_F8_type_C
Plasmid_RAQPRD
RAC_head
Motif
Other DBs
NCBI-GeneID:
101167953
NCBI-ProteinID:
XP_023811308
LinkDB
All DBs
Position
6:complement(5737860..5783752)
Genome browser
AA seq
1808 aa
AA seq
DB search
MLALVLVPGRRSGMNIMALLHTFLLLALHSSTWAQEGVASVDGVLENVGLPEFSDVCTEG
SCYPATGDLLIGRAHQLFATSTCGVTRPEPFCIVSHLQEEKKCFLCDSTVPFEERANHTN
SHRVENVVTTFGPNRLKTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIER
SADFGKTWQVYRYFAYDCESAFPSVPQGPMQKVDDVICDSRYSDIEPSTEGEVIYRVLDP
AFRIDDPYSPRIQNLLKITNLRVKFTKLHTLGDNLLDSRIEIKEKYYYAVYDMVVRGNCF
CYGHASECAPVLGAGQTMEGMVHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNAC
KRCNCNQHSDACHFDMAVFVASGGVSGGVCDNCQHNTAGHKCEQCKPFFYQHPERDARDP
NICQPCNCDPLGSVNGGLCDGMTDIRAGLIAGQCRCKVNVEGERCDRCRPAHYGLSDEPE
GCKACTCSPLGTAPGGNPCDSQSGNCFCKRLTTGQDCDQCVPEHWGLSNDVDGCRPCDCD
LGGAIHNQCDQMSGQCVCRDHMFGRRCDQIESGFYFSTLDHYTYEAEDAKFGPGVMLVPR
PHPQDRSPTWTGIGLVNVPEGAFLEFSVDNIPYSMEYSILIRYEPQLPDQWEEVLMTVMR
PGPIRADSRCINTVPDEDNQMTSLQSGSRNVVLPRPVCFESGLNYTIRLSLPRYSALGDV
QSPYTLIDSIVLMPYCQNLDMFTASEGGESSSWEIFQRYRCLENSQSVVKTPMTDICRNF
IFRISALLHQGAKECQCDPQGSLSTVCDPNGGQCRCRPNVVGRSCDRCAPATFQFGPSGC
IACECNPLGSQSPFCDQLTGQCGCVVGAYGRQCDRCLPGHWGFPACRPCSCNGHAETCDP
DTGSCLHCRDHTAGHSCERCLDGYYGDPVLGSGDHCRPCMCPDGPESLRQFAGSCFRSDD
SQQAVCVCSTGYRGPRCDECSPGFYGSPSEVGGQCVPCRCNNNIDMLDPESCDRQSGECL
RCLYYSEGTACQDCKLGYYGNALLQDCRKCVCNKLGTSPSSCSSSGDCHCNRSSGQCPCL
PNVTGQYCDRCAPDTWNMASGLGCQSCDCDPKHSYGTSCNQISGQCSCHPGFGGRTCNEC
KELFWGDPEVKCYACDCDPRGISEQQCNKANGRCVCVEGVSGPRCDTCARGFSGVFPDCQ
RCHQCFAEWDDVIGQLTNQTHRLVNKVNALRTSGVSGPHKKFFDSMQKSAAEIQVVLDQN
LASQPLTELQQLLQQASDLMGSLSQTLNRTEQTFVELEDQNSVTKTEVDSLMSDTQKLDE
TVQELQLQVQFIKNSNIRGASDSITKYFLKSQAAEARANASTVDSGSPTELSAELHRLTL
DTLNQTQEEFMSRHTEHAQNLDQLAGELQTLDLSWINQKMCGGPSNAQDSCRSSCGGLGC
EGKGGCGGEGCDGAVTTANNVLMRVEESEREIASALEEVDQLSKMVLEAKLQADEAKLSA
QNVLNNANRTKLKVDRSNEELRSLIRHIRDFLTQDAADPDSIEHVANEVLALQMPTTPAQ
LQNLTEEIRLKVGELGNVESILEQSAENIQRAEALLEQARHAREEAAGVKDSAEKVKHVL
EEVQKAQTSVGSAIQQAAAEIQNTKELLSSVEIETASAELKVNNATVRLQRLDEDVMLLK
SKNWNVSRSANMTSQDAAIIQSMADEVKQELQSGLKQKVSTVEQLIDQKAVGVAQAKDRA
ESLQKEAKELLLQAADKLQLLKDLEKSYEDNQHILEVKAEQLVELEAAVKELLQDISHKV
SVYSSCLF
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctctggtcttggttcccggtcgtcggtccgggatgaacatcatggcgcttctg
cacacctttctgctgcttgcgctgcattcgtccacctgggcccaagagggcgtggcctca
gtggacggggttttggagaatgtgggtcttccggagttcagcgacgtgtgcactgaaggc
agctgttacccagcaacgggtgaccttctgattggccgagcccatcagctgtttgccact
tccacctgcggtgtgacgcggcccgagcctttctgcatcgtcagccacctgcaggaggag
aaaaagtgttttctgtgcgactccacggtgccgttcgaggagcgggccaaccacaccaac
agccatcgcgttgaaaacgtggtgacgacgttcggcccaaacaggctgaagacctggtgg
cagtctgagaacggtctggagaatgtcaccattcagctgaaccttgaggcagagtttcac
ttcactcatctcatcatgaccttcaagacgttccgacctgctgccatggtgatcgagcgc
tcagcagacttcggaaagacttggcaggtttaccgctactttgcctacgactgcgaatcg
gccttcccttcagttcctcagggtccgatgcagaaggttgacgatgtcatctgtgactcg
cgctattctgacattgagccgtccactgaaggagaggtgatttacagagttttggacccg
gcatttcgaatagatgacccgtacagtccacgaatccaaaatctgctgaaaataaccaat
ctgcgagtcaagttcaccaagcttcatacactgggcgacaacctgctggactcacgcata
gagatcaaagaaaagtactactacgctgtctacgacatggtggttagaggaaactgcttc
tgttatggacacgcctctgagtgtgcccccgtcctgggagctggccagaccatggagggg
atggttcatggtcactgcatgtgtaaccacaacactaaaggcctcaactgtgaacagtgc
caggacttctaccacgaccttccctggagaccagccgaaggacgcaacaccaacgcctgc
aaaaggtgtaactgcaaccagcactctgacgcgtgtcactttgacatggcggtgtttgtg
gcttctgggggtgtcagtggaggagtttgtgacaactgccaacacaatacagcaggacac
aaatgtgagcagtgtaaaccattcttctaccagcatcccgagagagacgccagagacccc
aacatctgccagccctgtaactgtgatcccctgggctcggtgaatggaggactttgtgat
ggaatgacggacatccgggctggtctcatcgctggacagtgtcgctgtaaagtgaacgtg
gagggcgagcgctgcgaccgctgcaggccggcacattacgggctaagcgacgagcctgaa
ggttgtaaagcgtgtacctgcagtcctctgggaactgctcctggaggaaacccatgtgac
agccaatcaggaaactgcttctgcaaacgtttgacgactggacaagactgtgaccagtgt
gtgcctgaacactggggtctgagtaatgacgtggacggctgcagaccctgtgactgtgat
cttggaggagcgatacacaatcagtgtgaccagatgagcgggcagtgtgtttgcagagat
cacatgtttggtcggcgttgtgatcagattgagtctggattctacttcagcactttggac
cactacacctatgaagccgaagatgccaagtttggacctggggtcatgctggtcccgagg
ccccatcctcaggatcgcagtcccacatggacgggtatcggcctcgtcaatgttccagaa
ggtgcctttctagagttctctgtagacaacatcccatactccatggagtacagcatcctc
atccggtacgagcctcagctcccggaccaatgggaggaggttctgatgacagtaatgagg
cctggaccaatcagagcagacagccgctgtatcaacactgtgccagacgaagacaaccag
atgacctccctgcagtccggctcacggaacgtggttctccccagaccagtgtgcttcgag
tcaggcttgaactacacaatccggctcagtctgcctcggtactcggccctcggggatgtc
cagtctccatacacactcatcgactcgattgtgctgatgccgtactgtcagaacctggac
atgttcacggcctcagagggaggagagtccagcagctgggaaatctttcagcgttaccga
tgtctggagaacagccagagtgtggtgaagactccaatgaccgacatctgcagaaacttt
atctttaggatttcggctttgctgcatcagggagccaaagaatgccaatgtgaccctcag
ggctcgctgagcacagtgtgcgatcccaacggcggtcagtgccggtgtcggcccaacgtg
gttggccggagctgtgaccggtgtgctcctgctaccttccagttcggacccagtggctgc
atagcatgtgagtgcaacccactgggctctcagagtccgttctgtgatcagctgaccggc
cagtgcggctgtgtggtcggtgcgtacggtcggcagtgcgatcgctgcctgccaggtcac
tggggcttcccggcttgccgaccctgttcctgcaacggacacgccgagacctgtgacccc
gacactggcagctgcctccactgcagagaccacactgcgggacacagctgtgagaggtgt
ctagatggttactatggtgacccagtactggggtcaggtgaccactgtcgtccctgcatg
tgtcctgatggtccagagagtttgcgtcagtttgcaggaagctgtttccgtagcgatgac
tcccagcaggccgtatgcgtttgcagcactggatacagaggacctcgctgtgatgagtgt
tcgccgggtttctatggaagcccaagtgaggtcggagggcagtgtgttccctgtcggtgc
aacaacaacatcgacatgctagaccctgagtcctgcgaccgtcagagtggggagtgtctg
cgatgtctctactacagcgagggcacagcatgccaggactgtaagctgggttactatggc
aacgcattgctgcaagactgtcggaaatgtgtgtgtaacaagctgggcaccagcccgtcc
agctgctcctcgtctggagattgtcactgcaaccgcagcagcggtcagtgtccctgcctg
cccaacgtgaccggtcagtattgcgaccgctgtgcacccgacacctggaatatggcaagc
ggcctcgggtgtcagagctgcgactgcgaccccaagcactcgtacgggacgtcctgcaac
cagatcagtggtcagtgttcctgccatcctggctttggaggaagaacctgcaacgagtgt
aaagagctgttctggggagaccctgaagtcaaatgttacgcctgcgactgcgacccccgc
ggcatctcggagcagcagtgcaacaaagccaacggtcgctgcgtgtgcgtggagggcgtg
tccgggccgcgctgcgacacctgtgcccgcggcttctctggagttttccccgactgtcag
cgttgccaccagtgtttcgcagagtgggatgatgtcatcggccagctgaccaaccagacg
caccgactggtcaacaaagtcaacgctcttagaaccagtggcgtgagtggaccacataag
aagttctttgacagcatgcagaaaagtgctgcagagatccaggtggtcctggaccagaac
ctagcctcacagccgctgacggagctccagcagctgctgcagcaggccagtgacctgatg
ggctcgctgagtcagactctgaaccgcactgagcagacgtttgtggagctggaggaccag
aactctgtgaccaagactgaggtggactctctgatgtcagacactcagaaactggatgaa
acggttcaggagctgcagctgcaggtccagttcatcaagaactccaacatccgaggagca
tctgacagcatcactaagtacttcctgaagtctcaggcagcagaagctcgagctaacgcc
tccactgtggactctggcagccccacagaactttctgcagagctgcaccggctcactctg
gacactctgaatcagacccaggaggagttcatgagccgacacactgagcatgcccagaac
ctggaccagctggcaggagagctgcagactttggacctgtcgtggattaaccaaaagatg
tgtgggggtccttcgaacgctcaggactcgtgccgctcctcttgtggtggtctgggctgt
gaggggaagggtggatgtggaggagaaggctgcgacggcgccgtgaccaccgctaacaac
gttctgatgagggttgaagagtctgagcgggaaatcgccagcgccctggaggaagtggac
cagctctccaagatggtgctggaagccaagctccaggcagatgaggccaaactgagcgct
cagaacgtcctgaacaacgccaacagaaccaaactcaaagtagaccggagcaacgaagag
cttcgcagtctcatccgacacattcgagacttcctcacacaggacgctgcagacccagac
agcattgaacatgtggccaatgaggttctagctctgcagatgccaaccacaccggctcag
ctccagaacctcaccgaagagatccgactgaaagtgggggagctgggaaatgtggagtcc
atcctggagcagagcgctgagaacatccagagagctgaggccctgctggagcaggcccgc
catgccagggaagaggcggctggtgtgaaggactctgcagagaaagtgaagcacgttctg
gaagaggttcagaaagctcagacatcggttggcagcgccatccagcaggctgctgccgaa
atccagaacaccaaagagctgctgtcttccgtggaaatagaaacagccagtgcagagctg
aaggtcaacaatgcaaccgtaagactacagagactggatgaagacgtgatgctgctgaag
agcaagaactggaatgtcagcaggagcgccaacatgaccagtcaggacgctgcgatcata
cagagcatggcagacgaggtcaaacaggagctgcagtcagggctgaagcagaaggtcagc
accgtggagcagctgattgatcagaaggcagtgggagtggctcaggcaaaggacagggcg
gagtcactgcagaaggaggcgaaagaactgctgctgcaggcggctgacaagcttcagctt
ttaaaagatcttgaaaagtcttatgaagataaccagcacattttggaggtgaaagctgag
cagctggtggagttggaagctgcagtcaaagagctgctgcaggacatcagccacaaagtc
agcgtgtacagcagctgcctgttctag
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