Oryzias latipes (Japanese medaka): 101167976
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Entry
101167976 CDS
T02443
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101167976
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101167976
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
101167976
NCBI-ProteinID:
XP_023818592
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All DBs
Position
14:complement(15904944..15911076)
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AA seq
998 aa
AA seq
DB search
MNKKMRFPPGLINAIQEGKIGLLSGLLKTGDGIIRQLDESEDRQWREALNLSIRLGNEDA
MDALLHGVKFDFRQIHEALLVAVDTNQPLVVKRLLDRLDQEKGNKMDVRSFSQAIFDRSI
DNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHVIPYPHKMSCACLECRNGRQYDLLKFSL
SRINTYRGIASRAYLSITSEDAMLSAFSLSKELRKLSQKEPEFKPQYLSLEQLCQEFAFE
LLGMCRNQSEVTTILNSCGDETQEALHEQAFEEGIPNLSRLRLAVNYNQKQFVAHPICQQ
VLSSIWCGNLAGWRGSRTAWKLLVSVGIFFTMPLLCLVYWIAPKSKVGKILKIPVIKFLL
HAASYLWFLITLLGESITMEMYRDKFASRHQDILHSSFHMVWVVGFFWYECKEVWIEGLR
SYFLDWWNCLDMVVLSMYLASFTLRVVIMLKGYFLCHDDSNSEQCIYFTQTVRDDWHQED
PQLISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFMFILMIIGTAFLC
GINNVYVPYVISPHLGRFNETFNFLFWTMFGVANQDFVDMPQFVLAEFVGRILYGIFTLV
IVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPSPKAVF
YILRGIFRRICCCCTYSSEQKYPPIDSMPSDRMSEESQIPYRQQVIRALVQRYIESARRE
FEETKRKDIGNRITELSKAVTRMHSDMKVFQQLLMADRPAAIDALTNDGSSVLGKYITGA
KNNFRGFNSRQDDKNTSLKLAVNHGEEGEGQEKADLETQESDSQQVDECREVGAMQEKDC
EVVKMEEGRAKEESSLTGEQAETGKNENGKDIEEIAERVSFATLEEEVNSGAKVPGKPSE
IIPEHTESTTVSCETNDTKEILRKFKDLELRDKQAKAELIKGKKVENGVAEKLHGRGSGE
KPGDIKITPSPTGSSSSQDTGFGSREAVGSIDGLTVKT
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaagatgcgtttccctcccgggctcatcaacgccatccaagaagggaaaata
gggctgctgagtgggttgcttaagacgggggatggcatcatccgtcagctggacgagtct
gaagatcgccagtggagagaggctctaaacctctccatccgcttggggaatgaggacgct
atggatgcgctccttcatggggtcaagtttgacttccggcagattcatgaagctctgctg
gttgctgttgacaccaaccagcccctggtggtgaagcgcttgctggaccgtctggaccag
gagaagggcaacaagatggatgtgcgatccttctctcaagccattttcgaccgctctatt
gacaactcacagtttgctcctggtgtaactcctttgacgttggcctgtcagaaagacctg
tatgacatcgttaccatgctcacccaaaaaggccacgtcattccatatcctcacaagatg
tcctgcgcttgtttggagtgccgcaatggccgacagtatgacctgttgaagttctccttg
tctcgtatcaacacctatcgtggcatcgccagccgtgcatacctgtccataacctctgag
gatgcgatgctcagtgcatttagtctcagcaaagagctccggaaactgtcccagaaagag
cctgaatttaagccacagtacctcagcctggagcaactgtgtcaagagtttgcgtttgaa
ttgcttggcatgtgtcgtaatcagagtgaggtcaccaccatcttgaacagttgtggagac
gagacccaggaagctttacatgagcaggcctttgaggagggaataccaaacctgtcccgc
ctgcggcttgctgtcaattataaccagaagcagtttgtggcacacccaatctgccagcag
gttctgtcatctatctggtgcggaaacctggctggatggagaggcagcaggacagcttgg
aagctcctagtctccgtgggaatttttttcaccatgcctcttctttgtcttgtttactgg
atagcaccaaagtccaaggtaggaaagatcctaaagatcccagtgatcaaattccttctt
catgctgcatcatatctgtggttcctcatcacattacttggagagtcaataaccatggag
atgtatcgagataaatttgcctctagacaccaggacattctgcacagctcattccacatg
gtgtgggtggtcggattcttctggtatgagtgtaaagaagtgtggattgaagggttgcgg
agctattttcttgactggtggaactgcctggacatggtggtgctcagcatgtacctggca
tcctttacgctgcgtgtggtcatcatgctcaaaggctacttcctctgccacgatgacagc
aacagcgagcagtgcatctacttcactcagacagtacgagacgactggcatcaggaagac
ccccagctgatttcagaggtgctgttcgccgtgacgagcatgctgagctttacccgtttg
gcgtacatcctgccagcccatgagtccctgggaacgcttcagatctccattggaaagatg
attgatgacatgatgagattcatgtttatactcatgattattggaacagcattcctctgt
ggcatcaacaacgtctatgttccttatgtcatctctccccatctcggcaggtttaatgaa
actttcaacttcttattctggaccatgtttggtgttgccaaccaggactttgtggacatg
ccacagtttgtgttggcagagtttgtggggaggattttgtacggtatcttcactcttgtc
atcgtcattgtcctcctcaacatgctcattgctatgattacaaactcatttcagaaaatt
gaggatgatgcggacgtcgagtggaagtttgccagatcaaagctgtacctcagttacttc
agagagggcctgaccatgcctgtgcccttcaacatcattccttcacctaaagctgtgttt
tacatactgaggggtatcttcagacgaatctgctgctgctgcacttattcttcagagcaa
aaatatcctcctatagactccatgcccagtgacaggatgtctgaggagagccagataccg
taccgccagcaggtgattagggcattggtgcagcgctacattgagtctgctcgcagagag
tttgaggagaccaagaggaaagatatcggtaatcggattactgaactcagcaaagctgtg
accaggatgcacagtgatatgaaagtttttcagcagctcctgatggctgatcgtcctgct
gccattgatgccctgactaacgatggatcctccgtgctcggaaaatacataactggtgcc
aagaataattttagaggttttaacagcagacaagacgacaaaaatacatcacttaaattg
gcagtgaatcatggagaggaaggggaaggtcaagaaaaagctgatttagagactcaggag
tccgattcacagcaggtggatgaatgtagagaagtgggagctatgcaggagaaagactgt
gaggtggtgaaaatggaggaaggacgagctaaagaggagagcagtttgacaggggagcag
gcagaaacgggcaagaatgaaaatggcaaagacatagaagagattgcagaaagggtaagt
tttgccacccttgaagaagaggttaacagtggagcaaaggtgccaggaaaaccctcagag
attatcccagagcacaccgagagcaccacagtcagctgtgaaacaaatgacaccaaagag
atactgaggaagttcaaagacctggagctgagagataaacaagctaaagcagaattaatt
aaaggtaaaaaagttgagaatggagtagcagaaaagctgcatggtaggggcagtggagaa
aaacctggagatatcaaaataacaccatctccaacaggaagcagcagctcacaggacacg
ggctttggttcacgggaggctgtagggtcgattgatggcttaactgtgaaaacttag
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