KEGG   Oryzias latipes (Japanese medaka): 101168140
Entry
101168140         CDS       T02443                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101168140 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101168140 (exosc8)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     101168140 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C MurB_C
Other DBs
NCBI-GeneID: 101168140
NCBI-ProteinID: XP_004076251
UniProt: H2LGD5
LinkDB
Position
14:10274018..10276781
AA seq 277 aa
MAAGFKTAEPLEYHMSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKLGSTTVIC
GIKAELANPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQASSQFIADVIESSEIIK
PEDLCIDRGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTRLPKVTVNKATCKPEID
LKERHELPVHKHPVGTSFCIFQDSILIVDPTADEESLSTSRLSVVTDEEERLCSLHKPGG
TSLSAEKLQTCINRATARQREIQKLIEKVLNSVKAAQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctggattcaagaccgctgaacctctggaatatcatatgagctttctgaaagag
aactgtcgaccagatggacgcgagctgtctgaattcagaaccacgacattgaatataggg
tccatatccacggcagacggctctgcattggtgaagctgggaagcacaacagtcatctgt
ggcatcaaagctgaattggcaaaccctacagtggaagctcctggtaaaggatatattgtc
cccaatgtagacctaccacccctctgttcctcgcgatttcggccaggcccgccaggagaa
caggcccaagcttccagccagtttatcgctgatgtcatcgaaagctctgaaataatcaaa
ccagaggacttgtgcatcgacagaggaaagctttgctgggtgctgtactgtgacatcatg
tgtctggattatgatggaaacattctggatgcgtgcatcattgctctgctggctgcactg
aagaacactcgtctcccaaaggtcaccgtcaacaaagcgacatgcaaaccagagatagat
ttgaaagagcgacacgagctgccggttcacaaacatccagtcggcacctcgttttgtatc
ttccaggactccatcctgattgtagatcccaccgctgatgaggagagtctgtccacatcg
cggctcagcgtggtcacagatgaggaggaacgactctgctctctacacaaaccaggtggg
acgtccctgtcagcagaaaagctccaaacttgcatcaaccgagcaacagcacgacaaaga
gagatccagaaactcatcgagaaagttctaaacagcgtgaaggcagcacaataa

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