Oryzias latipes (Japanese medaka): 101168140
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Entry
101168140 CDS
T02443
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101168140 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101168140 (exosc8)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101168140 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
MurB_C
Motif
Other DBs
NCBI-GeneID:
101168140
NCBI-ProteinID:
XP_004076251
UniProt:
H2LGD5
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All DBs
Position
14:10274018..10276781
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AA seq
277 aa
AA seq
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MAAGFKTAEPLEYHMSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKLGSTTVIC
GIKAELANPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQASSQFIADVIESSEIIK
PEDLCIDRGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTRLPKVTVNKATCKPEID
LKERHELPVHKHPVGTSFCIFQDSILIVDPTADEESLSTSRLSVVTDEEERLCSLHKPGG
TSLSAEKLQTCINRATARQREIQKLIEKVLNSVKAAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaagaccgctgaacctctggaatatcatatgagctttctgaaagag
aactgtcgaccagatggacgcgagctgtctgaattcagaaccacgacattgaatataggg
tccatatccacggcagacggctctgcattggtgaagctgggaagcacaacagtcatctgt
ggcatcaaagctgaattggcaaaccctacagtggaagctcctggtaaaggatatattgtc
cccaatgtagacctaccacccctctgttcctcgcgatttcggccaggcccgccaggagaa
caggcccaagcttccagccagtttatcgctgatgtcatcgaaagctctgaaataatcaaa
ccagaggacttgtgcatcgacagaggaaagctttgctgggtgctgtactgtgacatcatg
tgtctggattatgatggaaacattctggatgcgtgcatcattgctctgctggctgcactg
aagaacactcgtctcccaaaggtcaccgtcaacaaagcgacatgcaaaccagagatagat
ttgaaagagcgacacgagctgccggttcacaaacatccagtcggcacctcgttttgtatc
ttccaggactccatcctgattgtagatcccaccgctgatgaggagagtctgtccacatcg
cggctcagcgtggtcacagatgaggaggaacgactctgctctctacacaaaccaggtggg
acgtccctgtcagcagaaaagctccaaacttgcatcaaccgagcaacagcacgacaaaga
gagatccagaaactcatcgagaaagttctaaacagcgtgaaggcagcacaataa
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