Oryzias latipes (Japanese medaka): 101168168
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Entry
101168168 CDS
T02443
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101168168 (usp6nl)
Membrane trafficking [BR:
ola04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101168168 (usp6nl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
101168168
NCBI-ProteinID:
XP_023807998
UniProt:
H2MRM1
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All DBs
Position
23:complement(21273242..21331989)
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AA seq
886 aa
AA seq
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MQVLQIVKELVSPSRHRAAARFGASDSGQDAALKLDQERADIVAKYDKGKEAVVESWEDT
NYNIYKVTDRFGFVHPNELPSFDSLEEKQKHTELERTTKWLKMLKSWDKYKNSEKLVRRI
YKGIPLQLRGEVWSLLLDIPKIKEEKKDFYEKLKARARETSPDVRQIDLDINRTYRDHIM
FMDRYDVKQQALFHVLTAYSMYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQK
HAMHGFFVPGFPKLMRFQEHHDRILKKMMPKLKQHLDNQEVFTSLYTMKWFFQCFLDRTP
FTLTLRIWDIYILEGERILPAMSYTILKLHKKHLMKLSMEELVEFLQVTLNKNFYYEDDF
VIEQLQASMTELRKAKLDLPPPGNEDELPKKPLGQLPPERAAPAPNQVANGQSHIEAARP
AKDSSPQMQRGESRPPSRSRRDSLEKPTRHHKRGSWGSTELPSEQQKQPPSVMPKRGATP
SSTPTPQITTEDAQRSQDHIATATTRREITPRWVKPSETKLEAAKAAAAAAQDRNHRLSP
APSNPDDDEKLEGQPRPKGFLPGSDRGSNASQYDNVPGLTELGFEILELERPPSRMRTPY
VEPAPVVSALHHGNLNRGLTLANSLVSATTGPRMPRNAPQFYQNTSTEIQASYHGIHTSS
QQQSPGRTTMEIPIHHPPFNRGEQHFSTASQLPSFSRKAYNELAYVTTQRQHNRSPEKAL
QNNSYATYRRQRLPDSAHNIRDSTSPLDKSMQVEIHGRSSPIYTQQLPATTPAYAKVDRM
YEDQHRRELNQAFVLEGRPQLAPDGLQWDPADPPPPSPGGMPRSPSFQRAQMSPVEEFTF
PDPLPDYRTQYQEPRQVIRPQRPQLFGQPHYRHAQEAFAMQESMLL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctacagatcgtcaaggagctggtgtcgccgtccagacacagagctgccgcc
agatttggagcgtctgatagtgggcaggatgcagcgctgaaactggaccaggagcgggcg
gatattgtggccaaatatgacaagggaaaagaagccgttgtggagtcctgggaggacacc
aactacaacatctacaaagtcaccgaccgcttcggcttcgtccacccaaatgaacttccg
tccttcgactcgttggaggaaaagcaaaaacatacagagctggagaggaccaccaagtgg
ctgaagatgctgaaaagctgggacaaatacaagaacagtgagaagctggtcaggaggatc
tacaagggcattcccctgcagctccgaggggaagtgtggagtctgctgctcgacattccc
aaaataaaagaggagaagaaggacttctacgagaagctgaaggccagagccagagagacg
tctcctgacgtccggcagattgacctggacataaacagaacctacagagaccacatcatg
ttcatggatcgctacgatgtcaagcagcaggcgctgttccacgttcttacggcgtactcc
atgtacaacacggaggtgggctactgtcagggaatgagtcagatcacagcgctgctgctc
atctacatgaatgaagaagatgccttctgggctctggtcaagctgctgtcaggacagaag
cacgccatgcacggattttttgttcctggtttcccaaagctgatgcgtttccaggagcat
cacgaccgtatcctcaagaagatgatgcccaagctgaagcagcacttggacaaccaggaa
gtgtttaccagcctgtacaccatgaagtggttcttccagtgcttcctggacagaactccg
ttcactctgactctcaggatttgggacatctacatcttggagggcgaacgaattctccct
gcaatgtcctacaccatcctcaaactgcacaagaagcacctgatgaagctgtccatggag
gagctggtggagttcctgcaggtgactttgaacaaaaacttctactatgaggacgacttt
gtaatcgagcagctgcaggcgtccatgacggagctcaggaaggcaaagctggatctgcca
ccaccaggtaacgaggacgagcttccaaagaagcctttagggcagcttcctcctgagcgc
gcagcacctgcaccaaaccaggtggctaacggtcaaagccacatagaagcagctcggcct
gccaaggactcaagtcctcaaatgcagcggggcgaaagtcgtcccccaagccggtcacgc
cgggactcacttgagaaaccgacacgtcatcacaagaggggttcctggggatcgaccgag
ctgcccagtgagcaacaaaagcagcccccctccgtcatgcccaagagaggagcaacccca
tcatcaacaccaacgcctcagatcaccacagaggacgcacagaggtcccaggaccacatt
gctacagccaccacccgcagggagataaccccccgctgggttaaaccgtctgaaacaaag
ctggaggctgccaaagcagcagcagcagcagcccaagacaggaatcacaggctgtcacca
gcaccttccaacccagatgacgatgagaagctggagggccagccacgccccaagggattc
cttcctggttctgacagaggctccaatgcctcccagtatgacaatgtcccagggctaact
gaactgggttttgagatcctagaacttgagagacctccgtccagaatgaggaccccatat
gttgaaccagctcctgttgtgtcagctttgcatcatggcaacctgaatcgtggactgact
ctggctaacagcttggtttccgccacaacggggcccagaatgccacgaaacgctcctcag
ttttaccagaacacttcaacagagatccaagccagttaccatggcatccacacatcctcc
cagcaacagtctccaggcagaaccacaatggagattcccatccaccacccccccttcaac
aggggagaacagcacttttctactgcttctcagcttccatcattttccagaaaggcttat
aatgagctagcttacgtgaccactcaacgccagcacaacagatcccctgaaaaggctctg
cagaataactcctacgccacatatcgcagacagcgcctgcctgactccgcccacaacatt
agagactccacgtcacccctggacaaatccatgcaggtagaaatccacggcaggtcctcc
cccatctacacacaacaactaccagcaaccacaccggcgtacgctaaggtagaccgcatg
tacgaggaccagcatagacgggagctaaaccaggcctttgtgctagaaggacgaccccag
ctggcgccagacgggctccagtgggaccctgcagacccgcctcctccgtccccaggtgga
atgccccgctcacccagctttcagcgagctcaaatgtctccggttgaagagttcactttt
ccggaccccctgcccgattatagaacacagtaccaggagccgcggcaggttatacggcca
cagcgccctcagctgttcgggcaaccacactacaggcacgcacaggaggcgtttgccatg
caggagtccatgctgctttga
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