Oryzias latipes (Japanese medaka): 101168201
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Entry
101168201 CDS
T02443
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101168201 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
101168201 (lrrn1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
LRR_9
LRR_EndoS
V-set
Ig_2
fn3
Pur_ac_phosph_N
LRRNT
LRRCT
LRR_NXF1-5
Sp38
Ig_5
Motif
Other DBs
NCBI-GeneID:
101168201
NCBI-ProteinID:
XP_004069152
UniProt:
H2MI08
LinkDB
All DBs
Position
5:complement(26841855..26853391)
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AA seq
714 aa
AA seq
DB search
MALNFQLWFPQILLCVGVVSFLPPSNGKECPRLCVCEIRPWFTPQSTYKEATTVDCNDLR
LTRIPSNLSADTQVLLLQSNTISHTSGDLQALVNLTELDLSQNNFTNVEAVGLQNMNHLT
TLHLEENQISELPDHCLGNLSSLQELYINHNKISYISPRAFAGLRNLLRLHLNSNKLHTM
DSRWFEETPNLEILMIGENPVIGLLDMNFQPLGSLRSLVLAGMDLTDVPASAFVGLDNLE
SISFYDNKLVRIPQLALQNVPNLKFLDLNKNPVRKIQEGDFRNMLHLKELGINNMMELVS
IDHYALDNLPELTKLEATNNPKLSYIHRLAFRDLPSLESLMLNNNALTAVYQKTVENLPN
LREISIHSNPLRCDCVIQWMTSNRTTVRFMEPLAMLCTSPPELKGKRVLELKLLESPEQC
LPLISHDSFPSHLDLELGMSVNLDCRAMAEPEPDIYWVTPLGSKVTTDTVSERYHLSSEG
TLRLSHVQVEDSGRYTCVAQNSEGADTWVATVRVNGTLLDSAQVMKIYVKQTESHSILVS
WKVNSNVMSSNLKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLTVSNIH
LQTHKSCVNVTTRSATFALDLSGQHPSAAVLVVMATMLAFLCLATVGMYTARKWKRKNYH
HSLKKYMLKTSSIPLNELYPPLINLWEADGEKDKDGGTEVKPCPVDTTRSYYMW
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcactgaacttccagctttggtttcctcaaatccttttgtgcgttggagttgtttcc
tttctgcctccatcaaacggcaaagaatgtcctcgtttatgtgtttgtgagatccgtccc
tggtttactcctcagtcaacctacaaggaggcgaccacggtggactgcaatgacctgagg
ctgacacgcattccatccaacctgtcggcggacacccaggtgttactgctgcagagcaac
accatctcccacaccagcggagatctgcaggctctggtgaacttgaccgagctggacctt
tcccagaacaacttcaccaatgtggaagccgttggccttcaaaacatgaatcatctgacc
acccttcatctggaggagaaccagatcagtgagctgcctgaccactgcctgggaaacctc
tccagcttgcaggagctctacatcaaccacaacaaaataagctacatctctccacgcgct
tttgccggcctgcgcaacctcctgcgactgcaccttaattcaaataagcttcacacaatg
gacagccgttggtttgaagaaacacctaaccttgagatcctcatgatcggggaaaaccca
gttattggtctactggacatgaacttccagcctctaggaagcctgagaagtttggttctg
gcaggtatggatctcaccgatgttcctgccagtgcctttgtgggcttagacaacctggag
agtatttctttctatgacaacaaactggtcagaatccctcaacttgctcttcaaaatgtt
cccaacctcaaatttttggatttaaacaaaaatcctgttcgtaaaatccaggagggagac
tttagaaacatgttacatctgaaggaactgggcatcaacaacatgatggagttagtgtcg
attgatcactatgcgttggacaacttaccagaactcacaaaactggaggctaccaacaac
cccaaactgtcgtacatacacaggttggcttttagggacctgccctctctcgagagcctg
atgctcaacaataacgctctcacagctgtttaccagaaaactgtggagaatttacccaac
ctgcgggagatcagcattcacagcaacccgctgcgctgtgattgtgtcattcagtggatg
acttccaaccggaccacggtgcgcttcatggagcccttggccatgctgtgcacctctcca
ccagagcttaaaggaaagcgagttctggagctgaagctgctggagtccccagagcagtgt
ctccccctcatctcccacgacagtttccccagccacttggacctcgagctgggcatgagt
gttaatctggactgtcgagcaatggctgagccagaaccagacatctactgggtgactcct
ctgggttctaaggttacaacagacacggtgtcagagcggtatcacctcagcagcgagggg
actctgcggctgtctcatgttcaggtggaagattctggtcggtacacctgcgttgcacaa
aactcagaaggcgccgacacgtgggttgccacagttcgtgtgaatgggaccctgcttgac
agcgcccaagtgatgaaaatctatgtcaagcagacagagtctcactccattctggtctct
tggaaagtcaactccaatgtcatgtcgtccaacctcaaatgggcttcagccaccatgaaa
atcgacaacccgcacatcacttacacagctcgcgttcctgtggatgttcacgagtacaac
ctcacgcacctgcagccagccaccgagtacgaggtttgcctcaccgtttccaacatacac
ctgcagacacacaagtcctgcgtcaatgtgacaacacggagcgccaccttcgccctggac
ctgtctggtcagcaccccagcgcggccgtgctggttgtcatggcaaccatgctggccttc
ctctgcctggccaccgtgggcatgtacacggcccgcaaatggaaaaggaaaaactaccac
cactccctgaagaaatacatgctgaagacctcctcgatcccgcttaatgagctgtaccct
ccactcattaacctgtgggaggctgatggggagaaggataaagatggggggacagaggta
aagccttgtcctgttgataccacacgtagttattacatgtggtga
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