Oryzias latipes (Japanese medaka): 101168277
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Entry
101168277 CDS
T02443
Symbol
myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101168277 (myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101168277 (myo5a)
04131 Membrane trafficking [BR:
ola04131
]
101168277 (myo5a)
03029 Mitochondrial biogenesis [BR:
ola03029
]
101168277 (myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101168277 (myo5a)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101168277 (myo5a)
mRNA cycle factors
P-body specific factors
101168277 (myo5a)
Membrane trafficking [BR:
ola04131
]
Others
Actin-binding proteins
Myosins
101168277 (myo5a)
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101168277 (myo5a)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101168277 (myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
AAA_16
HTH_17
NPHP3_N
Hydrolase_4
Motif
Other DBs
NCBI-GeneID:
101168277
NCBI-ProteinID:
XP_020555683
LinkDB
All DBs
Position
3:complement(27108794..27162181)
Genome browser
AA seq
1898 aa
AA seq
DB search
MNMNRELEYMFVESARVWIPDAEEEWKSAELVKDYKNGEASLQLMLEDGKVIEHKLDPKT
KNLPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYENL
PIYGTDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA
MRYFATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDNRYRIIG
ANMRTYLLEKSRVVFQADEERNYHVFYQLCASAHLPEFKNLRLSSANDFLYTRQGRSPVI
EGVDDSKELCTTRHAFTLLGINESYQMGLFQVLAAILHLGNVEIKDRDADSSLIAPNNRH
LTAFCELVGVTYQDMSQWLCHRKLKTANETYVKPLPRLQATNARDALSKHIYAKLFSWIV
EHVNKALVTNVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEE
YMREQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCS
LFEKPRMSNRAFIIQHFADKVEYQCEGFLEKNKDTVNAEQINVLKASKKFDLLMELFRDE
EKATSPTGQTPGTGGRTRLSIKPDKGRDSSSKEHKKTVGCQFRNSLQMLMETLNATTPHY
VRCIKPNDFKLAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQK
DVLADKKLTCRNVLEKLVEDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTI
RCWLARKKYLRMRNAAITIQRFTRGYQARCLAKFMRRTQAATIIQKYQRMCMERKRYRQK
QAAALAMQTILRAYMARQKYQALLREHKAVIIQKFIRGWLARCWYKRCLEAIVYLQCCIR
RMRAKRELKKLKIEARSVEHFKKLNKGMENKIMQLQRKIDEQHKDNRLVSEKLVSLENSY
SAESERMRSELNRLRGAEEDAKNKTNQVLSLREELERLKKELSATQQEKKTIEEWAQTYR
QEMEKMVSELKDQNGTLKKEKDDLNRLIQEQSQQMTEKMARAIVLETQQLETDLNEERSR
YQNLLTEHRRLEEKYDDLKEEMALSSNVSKPGHRRTDSTHSSNESEYTYNSEYTDLEDGS
RAREDVTRGMDTSLTLKLQKRVTELEQEKQSLRNELENKEDQFQRARARDDAEFKKARGA
ELEYESLKRQELESENKKLKHDLAAMRKSLLGDAVTGAGAPGSPAYKVLLDQLNASCEEL
EVRKEEVLILRSQLVSQKEAMHHKDEKETMTEPSVFAEDVSKLKDAGEIKQAYISLKDTN
RSPGFTSQPLDVGDLLSRLRSAAPDLHKLNEDGELWLVNQGLKETIRLLEHQLQSQRRTY
DNEVESLRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTNENLELMADDP
TASQEARVNILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAVQTEGQTSPGQMV
DEPIHPVNIARREKDFQGMLEYKKEDEMKLVKNLILELKPRGVAVNLIPGLPAYILFMCL
RHADYLNDDQKVRTLLTSTINSIKKILKKRGEDFETVSFWLSNTCRFLHCLKQYSGDETF
AKLNTPRQNEHCLTNFDLAEYRQVISDLAIQIYQQLIKCIEGTLHAMIVYGMLEHETIQG
VSGVKPTGLRKRTASIAEEDTYTLESMLRQLSAFHSTMCQHGTDPELIKQVVKQEFYIIG
AVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMNCGAKETLEPLIQAAQLLQVK
KKTDEDAEAICSMCHALTTSQIVRILNLYTPVNEFEERVSIAFIRTIQTRLRDRSESPQL
LMDTKMIYPVTFPFNPSSLALETIQIPSSLNLGFLTRV
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaccgggagttggagtatatgtttgttgaatctgctcgggtgtggatcccc
gatgcagaggaggagtggaagtctgctgaacttgtcaaggactacaaaaatggcgaggcc
tctctacagctcatgttggaggatgggaaggtcatcgagcacaaactggacccgaagacg
aagaacctgccttacctgcggaacccagacatcctggtgggagagaatgacctcacagcc
ctcagctacctccacgagccggccgtgctccacaacctcaaagtccgcttcatcgactcc
aaacttatctacacctactgtggaattgttcttgtggccatcaacccctatgagaatctg
ccgatttatggaacagacattatcaacgcctacagcggtcagaacatgggagacatggac
ccacatatctttgctgtggcagaagaggcatacaaacagatggccagagacgaacggaac
cagtccatcattgtgagtggggagtctggagcaggaaagacggtatcggcaaaatatgcc
atgagatactttgctacagttagtggttctgccagtgaagcaaacgtggaggagaaggtt
ttggcttctaaccccatcatggaggctattggcaatgcaaagacaacaagaaacgacaac
agcagccgctttgggaaatacatcgagatcggttttgacaatcgttatcgcatcattggt
gccaacatgagaacatatcttctagagaaatcacgagttgtgtttcaggcagacgaggag
aggaattatcacgtcttttatcagctctgtgcttcagcacatttaccagagttcaagaat
ctcagactcagtagtgcaaatgacttcctgtacacccgtcagggccgcagccctgtgatt
gaaggtgtggatgacagcaaggaactctgtaccactcgccatgccttcacactgctcggc
attaacgagtcgtatcagatgggcttgttccaagttttggctgctattctccatctaggg
aatgtggagattaaagacagagatgcagacagcagtctcattgctcccaacaatcgccac
ctgacggctttttgtgagctggttggagtcacctaccaggacatgtcccagtggctgtgc
cacaggaagctgaaaacagccaatgagacttatgtcaagcctcttcctcgccttcaagcc
accaacgcacgcgatgccctgtccaaacacatctatgccaagctcttcagctggattgta
gagcatgtcaataaggctttggtcactaatgttaaacagcactctttcattggagtcctc
gacatctatgggtttgaaacatttgaaatcaacagctttgagcagttctgtatcaactac
gctaatgaaaaactccagcagcagttcaacatgcatgtgttcaagctggaacaggaggaa
tacatgagggagcaaatcccctggactctaatcgacttctacgacaatcagccctgcatc
aacctcatagaagccaagatgggcatcctggacctgctggacgaggagtgcaagatgcct
aagggttctgatgattcatgggcgcagaaactgtacaacacccacctgaaaacatgttct
ctcttcgagaagccacgcatgtccaaccgcgccttcatcatccaacattttgctgataag
gtggagtaccagtgtgagggcttcctggagaaaaacaaggacactgtcaatgcagaacag
atcaacgtcctgaaagccagcaagaagtttgacctgctgatggagctgttcagagacgag
gagaaggcaactagccctactggtcagacccctggcaccggaggccgcacccgcctcagc
atcaaaccagacaagggtcgggactccagcagcaaggagcacaagaagactgtgggttgt
cagtttcgtaattctctgcaaatgctgatggagactctgaatgcaaccactccgcattac
gttcgctgcatcaaacccaatgacttcaagctggccttctcgtttgaccccaagcgtgcg
gtgcagcagctcagagcatgcggtgtcctggaaactattcgcatctcagctgcaggattc
ccttccagatggacgtaccaggagttcttcagccgctacagagtgctgatgaagcaaaag
gacgttctcgcagacaagaagttgacctgcaggaatgttctagagaagctagtggaggac
caggacaagtaccagtttggaaagaccaaaatcttcttcagggctggccaggtggcttac
ctggagaagctgagggcagacaagttgcgtgctgcatgtatccgcatccagaaaaccatc
cgctgctggttggcgcgcaagaagtatctgcgcatgcgcaatgctgcaattaccattcag
aggtttacgagaggataccaggcccgctgtttggcgaagttcatgcgtcgcactcaggca
gctaccatcatccagaagtaccagaggatgtgtatggagaggaaacgctacaggcagaag
caggctgctgccctggccatgcagacgatactaagggcttacatggcccggcagaagtac
caggcgcttttgcgagaacacaaggcagtaataatccaaaagttcattcggggctggttg
gcccggtgctggtacaagcgctgtctggaggccatcgtttacctgcagtgctgcattcgt
agaatgagagccaagagggagctgaagaagctgaagatcgaggctcgttcagttgaacac
ttcaagaagctcaacaaaggcatggagaacaagatcatgcaactgcagaggaagatagac
gagcagcataaagacaatcggttggtcagtgagaagctggtgagcttggagaactcctac
tcagctgaaagcgagcggatgcgcagtgagctgaaccggctgcgaggcgcagaggaagat
gccaagaacaaaaccaaccaggtgttatccctgcgggaggagctggagaggctgaagaag
gagctgagcgccacgcagcaggagaagaagaccatcgaggagtgggcacaaacctacagg
caggaaatggagaagatggtttccgaactgaaggatcagaacggaacgctgaagaaggag
aaggacgacttgaacaggttgattcaggaacagagtcagcagatgacagagaaaatggct
cgtgcgattgtcctggagactcagcagctggaaacggatctgaacgaggaacgctctcgt
taccagaacctgctcacagaacaccgtcgcctcgaggagaagtacgacgacctgaaggag
gagatggcgctctcttcgaacgtgtccaagcctggtcacaggagaaccgattccacccac
agcagcaacgagtccgagtacacatacaactcagaatacaccgatttagaagacggttcc
cgtgcccgcgaagatgtcactcgaggaatggacacctccttgaccctcaagcttcagaaa
cgcgttacagagctggagcaagaaaagcaatcgctgcgcaacgagctagaaaacaaagaa
gaccagttccagcgagctagagccagggatgatgcagagtttaaaaaggcccgtggagct
gaactggagtacgagtctctcaagcgtcaggagctggagtctgaaaacaagaagctgaag
catgacttggcagcgatgaggaagagcctgctgggcgatgcagtcacgggtgctggggcg
ccgggttctccagcttacaaggtgcttctggaccagctcaacgcctcctgtgaagaactg
gaggtccgcaaagaggaggtgctgattctgcgatcccagctagtcagccagaaggaagcc
atgcaccacaaggatgagaaggagaccatgacggagccgtctgtgtttgccgaagacgtg
tccaaactgaaagacgcgggcgaaataaagcaggcttacatcagcctcaaagacaccaac
aggtctcccggattcacgtctcagcctctggatgttggtgacctcctgagtaggctgaga
tctgctgctccagacttgcataagctgaatgaggacggggagctgtggctggttaatcag
ggcttaaaggagaccatcaggttgctggagcatcagctgcagagtcagcggagaacgtat
gacaacgaggtggagtcgctgcgcggcgaactgcagaacgtcaaggaggagaacaaccgg
cagcagcagctgctggctcagaacctccagctgcctccagaggcccggatcgaagccagt
ttgcagcatgagatcacccggctcaccaacgagaacctggagctcatggcagacgacccc
acagcatcccaagaggctcgagtcaacattttacggcggatggttgacctcatggagcag
ctggagaagcaggacagaaccatccgcaagctcaagaaacagctgaaggtttactccaag
aggattggagaaatgggagcggtacagactgaagggcaaacctctccagggcagatggtg
gacgagcccatccaccctgtcaacatcgcccgcagggagaaagacttccaaggaatgctt
gaatacaagaaagaggatgagatgaaactggtcaagaatctaatcctggagctgaagcct
cgtggcgtagccgtaaacctgatcccgggcctgccagcctacattctgttcatgtgtctg
cgacacgcagactatctgaacgatgaccagaaggtccgcacgctgcttacctcaacaatc
aacagcattaagaagatcttgaagaaacgaggagaggactttgagacggtgtctttctgg
ctgtccaacacctgccgcttcctgcactgtctgaaacaatacagcggagatgagactttc
gcgaagctcaacacacctcggcagaatgaacactgtctgaccaactttgacctggcagag
tacagacaagtgatcagtgacctggccatccagatctaccagcagctcatcaagtgcata
gaaggcacccttcacgccatgatcgtttatggcatgttggagcatgaaaccatccagggg
gtgtctggcgtgaagcccacaggtctccgcaagcgcacggccagcatcgccgaggaggac
acatacaccctggagtccatgctgaggcagctgagcgccttccactccaccatgtgccag
cacggcaccgaccccgagctcatcaagcaggtggtgaagcaggagttctacatcatcgga
gccgtcaccctcaacaacctgctgctgcgcaaagacatgtgctcctggagcaaaggcatg
cagatcaggtacaatgtgagccagctggaggagtggctcagagacaaaggtctgatgaac
tgcggagccaaggagacgctggagcctctgattcaggccgctcagctgctgcaggtgaag
aaaaagacggacgaggacgccgaggccatctgctccatgtgccacgccctcaccacctct
cagatcgtcaggattctcaacctctacactccagtaaacgagtttgaggagcgagtgtcc
attgcgttcattcgcaccatacagactcgcctgcgagaccgctctgagagcccccagctc
ctcatggatactaaaatgatctatccggtcaccttccccttcaacccctcctccctcgcc
ctggagaccatccagatcccctcctccctcaacctgggcttccttacccgagtctaa
DBGET
integrated database retrieval system
