Oryzias latipes (Japanese medaka): 101168448
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Entry
101168448 CDS
T02443
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101168448 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
101168448 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101168448 (lsm4)
03041 Spliceosome [BR:
ola03041
]
101168448 (lsm4)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101168448 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
101168448 (lsm4)
Spliceosome [BR:
ola03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101168448 (lsm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101168448
NCBI-ProteinID:
XP_004067969
UniProt:
H2LWP3
LinkDB
All DBs
Position
4:complement(13833583..13837300)
Genome browser
AA seq
144 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKDEVVSKGRGRGGAQQNKQQGKGRGGAGRGVFGSRGRGMSG
PGRGQQPQQPDKKPSKQQGMKNQH
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttgtcccttttgaagacggcccagaaccatcctatgctggttgaactgaag
aatggagaaacctacaacggtcatctggttagctgtgacaactggatgaacatcaacttg
agagaagtcatctgcacatccagggatggtgataagttttggaggatgccagagtgctac
atcaggggaagtaccatcaagtatctgcgaattccagatgagattattgacatggtgaag
gatgaggtggtttctaagggtcgtggacgtggaggtgcccagcagaataagcagcagggt
aaaggaagaggcggagccggccgaggtgtgtttggcagccgcggcagagggatgtcaggt
cctggtcgaggccagcagccacagcagccggataaaaaaccaagcaaacagcagggaatg
aagaaccagcactga
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integrated database retrieval system
