Oryzias latipes (Japanese medaka): 101168465
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Entry
101168465 CDS
T02443
Name
(RefSeq) integrin beta-3
KO
K06493
integrin beta 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03266
Virion - Herpesvirus
ola04081
Hormone signaling
ola04145
Phagosome
ola04148
Efferocytosis
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
ola04810
Regulation of actin cytoskeleton
ola04820
Cytoskeleton in muscle cells
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
101168465
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
101168465
04512 ECM-receptor interaction
101168465
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101168465
04148 Efferocytosis
101168465
09144 Cellular community - eukaryotes
04510 Focal adhesion
101168465
09142 Cell motility
04820 Cytoskeleton in muscle cells
101168465
04810 Regulation of actin cytoskeleton
101168465
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101168465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101168465
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101168465
04515 Cell adhesion molecules [BR:
ola04515
]
101168465
04090 CD molecules [BR:
ola04090
]
101168465
Membrane trafficking [BR:
ola04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
101168465
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101168465
Cell adhesion molecules [BR:
ola04515
]
Integrins
Integrin beta subunits
101168465
CD molecules [BR:
ola04090
]
Proteins
101168465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
I-EGF_1
PSI_integrin
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
101168465
NCBI-ProteinID:
XP_004071608
LinkDB
All DBs
Position
8:complement(5707007..5721149)
Genome browser
AA seq
783 aa
AA seq
DB search
MRTLIRHIALLFFSASVISGSNICTSRGSTTCKQCLAVHPSCAWCFQEDFGKGSGVSRCD
LKQNLLNEGCKAAAVEFPASTLTIQKDTPLSDRASGAAEDVTQIRPQKIHMTLRPGDSKF
FTVSIKQVEDYPVDLYYLMDLSYSMKDDLSNLQNLGSKLAETMARTTSKLRMGFGAFVDK
TISPYMYTYPQEAVQNPCWGISQQCKAQFGFKHVLSLTEQVARFTEEVKKQQVSRNRDSP
EGGFDAIVQAVVCKDKIGWRPDASHLLVFTTDATTHSALDGRIAGIVQPNDGQCYLDTND
LYNKSAVLDYPSLGLMIDKISANNINLVFAVTSVVVPLYKEYSQLIPGTTVGTLSQDSGN
VIQLIEEAYAKIRSKVELEVLGVPDELSLSFNASCLKGEVIPGVKSCSGLKIGDTVSFSM
EARLLECPKEKSRTFTIKPRGFKDALEVTVDFACSCDCEAKAEVNSPLCSKGNGTYECGI
CQCHQGRLGTRCECSVEDYRPSDDGNCVSKAGGRVCSGKGECLCGQCSCHANDFGQVWGK
YCECDDFTCPHFKGALCSGNGKCDCGLCQCDAGWKGDNCNCTTRTDTCMSSAGLLCSRLG
YCECGVCQCTQPGAYGATCEKCPTCPDSCTIKKACVECQHFKRGQYTEDDSCNRICKNEI
RVVEELVKRDENAVNCSYKDENDCVVHFQYFEDFSGKSILSVVKEPECPQGPDILVVLSA
VAGAILLLGLVGLLIWKLLITIHDRREFAKFEEERAKAKWDTGNNPLYKGATSTFTNVAY
QGN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccttaataagacacatagctcttctcttcttttcagcttctgtcatcagcggt
tctaacatctgcacatcaagaggaagtacaacctgtaagcagtgcctggctgttcatcca
agctgtgcgtggtgctttcaagaggactttgggaagggatccggtgtctctcgctgcgac
ctaaagcagaatctgctaaatgaagggtgcaaggcagcagctgtggagtttccggccagc
acactaactattcaaaaggacacaccgctcagtgacagggcttcaggggcagctgaggac
gtgactcagatcaggcctcagaaaatccacatgacactgagaccaggcgactccaagttt
ttcactgttagcataaagcaggtggaggattaccccgttgacctctactatttgatggat
ctctcatattccatgaaggacgacttgtctaacctgcaaaatttgggcagcaagcttgca
gagaccatggcccggaccacaagcaaactgcgaatgggatttggagcctttgtggacaag
accatttccccgtacatgtacacgtacccccaagaagctgtacaaaacccttgttgggga
atttcccagcaatgcaaagctcagtttggcttcaagcacgtgctctcgctgacagagcag
gtggctcgctttacagaggaagtgaagaaacagcaagtgtctagaaacagagattctcca
gagggtggatttgatgctattgttcaggctgtggtttgtaaggataagatcggttggcgc
ccagatgcctcacatcttctagtttttaccactgatgccactactcactcagctttggat
gggcgcatagctggcattgttcagcccaatgatggacaatgttacctggatacgaatgac
ctttacaacaaatctgctgtgctggactacccttccttaggactcatgatagataaaata
tctgcaaacaacatcaatttagtctttgctgtaaccagtgttgtggtaccactgtataag
gaatacagtcaactcattccaggcacaactgtgggaacactatctcaggactctgggaac
gtcattcagctgattgaggaggcctatgctaaaattcggtctaaagtggagctggaggtg
ttgggagtaccagatgagctgagcctctccttcaatgcctcttgcttaaaaggagaggtc
attcctggagtaaaatcttgttcaggactaaagattggagacactgtgtccttcagcatg
gaagctcggttgcttgaatgcccaaaggagaaaagccgcacttttaccataaaacctcgg
gggtttaaagacgctctggaggttacggtggactttgcttgcagctgtgactgtgaggca
aaggcagaagtcaacagcccgctctgcagcaaaggcaatggcacctacgagtgtggtatt
tgccagtgtcaccaaggccgcctgggcacaagatgcgagtgttcggtggaggactacagg
ccgtctgatgatggaaactgtgtctcaaaggctggcggccgtgtctgcagcgggaaagga
gaatgcttgtgcgggcagtgctcctgtcatgcaaatgactttggccaggtgtggggaaaa
tactgtgaatgcgacgatttcacctgtccgcactttaaaggggccctgtgctctggtaat
ggaaagtgtgactgtgggctttgtcagtgtgatgccggctggaaaggagataactgcaac
tgcaccactcgcacagacacctgcatgtccagcgctgggctgctttgcagcagactggga
tactgcgagtgtggggtttgtcagtgcacccagccaggggcgtacggagctacctgtgaa
aaatgccccacctgtcctgactcctgcacaatcaaaaaggcatgtgttgagtgtcagcat
tttaaaagaggacagtacacagaagatgacagctgcaaccgaatctgcaaaaatgagatt
cgggttgtggaggaacttgttaagcgtgatgagaatgcagtgaactgctcctacaaagat
gagaatgactgcgtcgtgcacttccagtattttgaagattttagcggaaagtctatcctg
tctgtggtgaaggaaccagagtgccctcagggtcctgacattttagtggtgctctcggcg
gtggctggagccattctcctgctgggcctcgttggtttgctcatctggaaactgctcatc
accatccacgatcgcagagagtttgccaaatttgaggaggagagagccaaagcaaaatgg
gatacgggtaataatcctttatataaaggagcaacatctaccttcaccaatgttgcatat
caaggcaactaa
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