Oryzias latipes (Japanese medaka): 101168533
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Entry
101168533 CDS
T02443
Name
(RefSeq) serine/arginine-rich splicing factor 3 isoform X2
KO
K12892
serine/arginine-rich splicing factor 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101168533
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101168533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101168533
Spliceosome [BR:
ola03041
]
Common components
Common spliceosomal components
SR proteins
101168533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
101168533
NCBI-ProteinID:
XP_004068509
LinkDB
All DBs
Position
5:complement(2320867..2325401)
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AA seq
230 aa
AA seq
DB search
MSTLASAHREAPPLAVQHPGHFLQSNVFSVTPFSTVGWRQCIGETGAREKEFFSAVNSFG
SDSIMHRDCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR
DATDAVRELDGRTLCGCRVRVELSNGEKRSRSRGAPPSWSRRPRERDDYRRRSSPPPRRR
SPRRRSFSRSRSRSFSKDRRRERSLSRDRNHKPSRSFSRSRSRSRSNDRK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgctcgcgagcgcgcacagagaagccccgcccctcgcggtgcagcatcctggt
cactttttacagtcgaacgtattctccgtcacgccattttccaccgtcggctggaggcag
tgcatcggcgagacgggtgcacgtgaaaaagagttcttctcagcggtgaattccttcggc
tccgattccatcatgcaccgtgactgtcccctggactgtaaggtctacgttggaaatttg
ggcaacaatgggaacaaaaccgagttggagcgcgcctttggctactacggacctcttcgt
agcgtctgggtggccaggaaccccccaggtttcgccttcgtagagtttgaagatcccaga
gatgcaacggatgcggtgcgagaactggatggaaggacactgtgcggctgccgggtgcgc
gtggagctgtctaacggggagaagcgcagccgcagtcgcggcgctcctccatcgtggagc
aggcggccgcgggaacgggacgactacaggcggcgtagcagcccgccacccaggagaaga
tctccccgtaggcgaagcttcagccgcagccggagcaggtctttctccaaagacaggagg
agagaaagatccctctccagggacaggaaccacaaaccctctcggtccttctctcgatcc
aggagccgctccaggtcaaacgacaggaaatag
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