KEGG   Oryzias latipes (Japanese medaka): 101168551
Entry
101168551         CDS       T02443                                 
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101168551 (rlim)
Enzymes [BR:ola01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101168551 (rlim)
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101168551 (rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 DUF3199 zf-RING_16 zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 101168551
NCBI-ProteinID: XP_011478591
UniProt: A0A3B3HS71
LinkDB
Position
10:17954334..17960553
AA seq 651 aa
MEGSDGVEQGGSDQPESQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGNPGEVT
EDELISRLQQIKGGPEQQSNNPATESTEEPVEQPESSEDPPGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEAEQEPPEQPAEGQDVSV
EPEAQVPMEAEVVEEPVVEELAVLVEPEPEVDEVVSHQVVEEPSSPPTPPPPPPPPVQPP
PCSSPRRGQRRARSRSPEPRRTRARLARSRSPLSLDQLDGIPIPRHDYSSQSSSSSSNTP
TVPPVEGSSRTRQHILSRQNFAEGDVWPPRAPAEPVPESPNAGSQEGETAGGEGGEAGEG
GAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSR
SERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDS
NRAAGTPADSETLNNPDVNNTDSADVDEQPVAAGVRGRTVEADADEGLAAGQPASGGRPR
PRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVC
ITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq 1956 nt   +upstreamnt  +downstreamnt
atggaagggtctgacggtgtcgaacagggtggcagtgaccagcctgagtcacagcgcagg
aggcagctggatcgcctggacagagaggaggccttctaccagtttgtcaacaacctcagt
gaggaagactatcggctaatgagagacaacaatcttttaggcaatccaggagaggtcaca
gaggatgagctgattagtcgtcttcagcagatcaaaggtggtccggaacagcagagtaac
aaccctgctactgagagtactgaagaaccagttgaacaaccagagagctctgaggatcct
ccaggtggggatagccttcttgattggctgaacacagtgcgacgcacaggcaacacaacc
agaaccggtcatcgcgggaaccagtcatggagggctgtgagccagaccaatccaaacagt
ggcgattttcgcttcagcctggaaattagtgtgaaccgcaatctggctgagcagcaggcg
gctgctgaagcggagcaagagcctccagaacagcctgctgaaggtcaagatgtgtctgtc
gaacctgaagcacaggttcccatggaagcagaagtggtggaagaaccagttgttgaggaa
ttggccgtccttgtggagccagagcctgaagtagatgaagtagtttcacatcaggttgta
gaggagccttccagtccaccaacgccgccgcctccaccgcctcctcctgttcaaccccct
ccttgttcttctccacgtagaggacagagaagagctcgcagccgcagcccagaaccacgc
agaactcgtgcccgccttgctaggagccggtcccctctcagcttggatcagcttgatggc
attccaattccgagacatgattacagttctcaaagctcgagttcttcctcaaatactccc
actgtgcctccagtggagggcagctctcggactcgacagcatattctttcacgtcagaac
tttgctgaaggggacgtttggccacccagagctcctgctgaacccgtcccagagtcccca
aatgctgggtctcaggaaggagaaactgctgggggtgaaggtggggaagctggtgaaggc
ggtgcagcggggcgccgccctcccaccataatgcttgatctacaggtgcggcgcgtgcgc
cccggtgaatatcgtcagagggacagcatcgccagccgcactcgctcacgctcacagaac
tcgaacaacacgtttctttacgagagcgagcgcggtggatttcgcaggactttctcgcgc
tccgagcgcgctggcgtgaggacctacgttagcaccattcgaatccccatccgaagaatc
tctgacgcaggtttaggagaggcaacatcaatggctcttcagtctatgattcggcagatc
atgacgggctttggcgagcttggctacctcatggattcagactctgactcctcggattca
aaccgtgctgctggcacgcctgcagactctgaaacccttaataatccagatgtgaataac
actgactctgctgacgtggacgaacagccggttgctgctggagttaggggaaggacagtg
gaggctgatgcggatgagggcctcgctgctggtcaaccggcgtctggcggccggcctcgc
ccccggccgcccattagcttagaggagcccagctccctgcccttcctacggcttgctcac
ttctttctattgaatgatgacgatgaggaccagcctcaggggctgaccaaagaacagatc
gacaacctttctatgcgcaacttcggggagagcgatgctttgaagacctgtagtgtctgc
atcacggaatacgcagagggcaacaagcttcgcaagctcccatgctctcatgaatatcac
gtgcactgcatagatcgctggctctctgaaaactccacctgccccatctgccgccgggcc
gtcctggtgtcagccaaccgagaaagtgtggtctaa

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