Oryzias latipes (Japanese medaka): 101168566
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Entry
101168566 CDS
T02443
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101168566 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101168566 (rnf43)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101168566 (rnf43)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101168566 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
101168566
NCBI-ProteinID:
XP_023818081
LinkDB
All DBs
Position
14:20440656..20538673
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AA seq
816 aa
AA seq
DB search
MTVHPRRLAGLWPWLLMAALQVVLGQPGLESEHPLLRALIKVTLLKHEATGKPIVVEGLF
VGGSAGKAEGRLMQYHPLSLCNTSEDERQDGDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELREANSFSRPVVLVEAQGAEDLMGLVNKNEEANVVIEIKVEPK
WLHYDVSILLTIILVIFTIVLIFVFRYKCKSNRTWDSVHQQTVQAINRLETKTYSTQNCS
GSQRHRGAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKACVDPWLLQHRTCPL
CMHNIMGTERQAQRNRAQQNSEQSQGFLHSQPYSNPQHHPFPQHAIPFSMRPLYPHGLSG
PYPNLGHYSGSSPMDTQTLHFLSSRQLGAGCGYHHPAEVPGRPHRTGGSCRTPTHHYTPR
RSCHNYRSFCPAQRSASSSRLQHAISVTPQSRGVAARSRQDEASCSGGSYHTDRSGYFPD
GPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGAGRLPN
TNSPEVSSQVRPRSLDSVVNKAGSPEEQPQTVSIHYHRHRHHHYEEGEHSQGPNRGSDEE
QGAGAAAAAPLSALIRDKDSPVCPPKNSSCHCLKPEPTGGLSPGTECQDHDPNCPSVPPV
LVSPIPLKLQSHCCHQSHGHLHAPQGRLGGCLLDGPSVHFHQSLDLQDDRNIHIHYGEGP
SFCCSPPELHPALLPVPLILDSGGMEDWPCCAGTHVVWQKQVQQAHSEPQLVGAGIPMDR
TPCRFHQGPAGDHSTDFCSYFPSLHSNQGSEEESGV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccacccgcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcacccgctcctccgagcgctcatc
aaggtgactctgctgaagcacgaggccacggggaagcccatcgtcgtggagggactattc
gtgggaggtagcgccgggaaagcggagggaagactgatgcagtatcaccctctgtccctg
tgcaacacaagcgaggatgagcgacaagatggcgacttcatcaccatcgtcaagctggag
cacagggtgccccgctgcctgccgctgctcgacaaggcccgcatggcattggataaagga
gctcaggctgttatctttgatgtcagcgatgacgccaacgccgctgccgagctgcgggaa
gcaaactccttttcccgtccggtggtgctggtggaggctcagggtgctgaggacctgatg
ggtttggtcaacaagaacgaggaggccaatgttgttattgaaatcaaagtggaacctaag
tggctccattatgacgtgagcatcctgcttaccatcatcctggtcatttttactatcgtc
ctgatctttgttttccgctacaagtgcaagtccaacagaacctgggattctgtccaccag
cagacagttcaggctatcaaccggctggagacaaaaacctacagcactcagaactgttct
ggctcacagcgccaccggggggcctggggatcggccagcagctccaactccagccccgtc
tgtgccatctgcctggaggaattccaggatggacagcatcttaggatcatctcctgtgct
catgagttccataaggcctgtgtggacccgtggctgctgcagcaccggacatgccctctc
tgcatgcacaacatcatgggaaccgagcgccaggctcagaggaacagagcccagcagaac
tcagagcaaagccagggcttcctgcactctcagccttacagtaaccctcagcaccacccc
tttccccaacatgccatccccttctccatgaggcccctttacccccacgggctctctgga
ccttatcctaatctgggccactacagcggctcctctcctatggacactcagactctacat
ttcctcagcagtaggcagctgggtgcaggctgtggataccaccaccctgcagaggttcct
gggaggccgcacagaactggaggcagctgcaggacccccactcaccactacacccctcgg
cggtcctgccacaactaccgctccttctgtccagctcaacgcagtgcatcaagctccaga
ctgcaacacgccatctctgtcacacctcagagcaggggggtggcagcccgcagccggcag
gacgaggccagctgttcagggggcagctaccacacagaccggagtgggtactttcccgat
gggccggccagtgactccagctcaggaccctgccacggctcttccagcgattcagttctc
aactgtactgatgtctctctgcagggagtttatgggagttggtccaccttccgcagttct
ctgagtagcgactatgacccttttgtgtattacgggccgggtgctgggcggcttccgaac
acaaacagccctgaggtgagttctcaggtccggcccaggtctctggattctgtggtgaac
aaggccggctctcctgaagagcagccacagactgtttccatccactaccaccggcaccga
caccaccactacgaggagggggaacacagccagggcccgaacagaggctccgatgaggag
cagggggctggcgctgctgctgcagcacctctctctgccctcatcagggacaaagactct
cctgtgtgtcccccaaagaacagctcatgccactgcctcaaaccagaacccactggtggg
cttagtcctgggactgaatgtcaggaccatgaccccaactgcccctcggtacctcctgtc
cttgtgtccccaatccctctaaagcttcagtcccactgctgccaccagagtcacggacac
ctccatgctcctcaggggcggttggggggctgtctgctcgatggtccctctgtccacttc
caccagagcttagatctgcaggatgaccgcaacatccacatccactacggcgagggtcca
agcttctgctgctccccccctgagctgcaccctgccctgctccctgtgcctctcattctg
gactctggaggaatggaggactggccgtgctgtgcaggaacgcatgttgtgtggcagaaa
caggtgcagcaagcccactcagagcctcagcttgtgggggctgggatccctatggacaga
acgccatgtaggttccaccaggggccggctggcgaccacagcacagacttttgttcatac
ttcccatcattacacagcaatcagggatcagaggaggagtctggggtgtaa
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