Oryzias latipes (Japanese medaka): 101168670
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Entry
101168670 CDS
T02443
Name
(RefSeq) C-myc promoter-binding protein isoform X2
KO
K20163
DENN domain-containing protein 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101168670
Membrane trafficking [BR:
ola04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101168670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
101168670
NCBI-ProteinID:
XP_011490805
LinkDB
All DBs
Position
3:1396191..1494882
Genome browser
AA seq
1903 aa
AA seq
DB search
MEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKTAKPKAPVTDVAVVIRSLGEEAPP
GFTCIETTPTGQSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLFQWKERLKQGCHLIQ
TTPFGRSANISGNSSQRIYITYRRAPDSQPHAALAVTDICIIIPSKGETPPHTFCKVEKN
LNSSMWGSSVFLCYKKSVAKTNAVVYKAGLFSRYPEEDYESFPLPESVPLFCLPMGAIIE
CWPANTKYSLPIFSTFVFTGASGEKVYGAAIQFYEPYPPECLTNQQLCRLGLLSAEQLSN
TNPAGSSCSVHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPIEKHISHFMHKVP
FPSSQRPRILVQLSPHDSLMLSQPASSPLPLSGGRFSTLLQNLGPENAVTLLVFAVTEHK
ILVHSLRPAVLTSATEALVSMIFPFHWQCPYIPLCPLALADVLSAPCPFIVGVDSRYFDL
YDPPPDVSCVDLDTNTIFHCEDKRGLTWKILPKKPCKNLLNVLSRLYQELLDGQCQLDGL
LELSMSDSPELSCGKSLHTLELEIREAFLRFMAAILKGYRSFLRPITQAPSEKATDASSL
FDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLVFFDECVDKVDGEKLE
DARLIETDESHRSEHTVFITPPELPPLPGVEEHPLCYRYDGFPVLSLDLFDPVAPTPDGL
QAPSSRLSARHSCPSSPAPMFRRTKQEIRSAQKMAKKYSSIPQLWSKCLLRHCYGLWFIC
LPAYVKVCHSKVRALRSAYDVLRKMQTKKLQPPDEVCYRVLMQLCGQYGQPVLAVRVLFE
MKKAGVHPNAVTYGYYNKAVLESTWPSSNRGGYFLWMKLRNVLLAVAQFKRSLSRPALLT
QSPLSDVSDLDAVSHGSLDSSADPGPSAADDRSSTGDQSDLGYNSLSKEEVWRGAAPPQD
SRKESDCSSLSETESSKGSRDCLPQLDADPSFKPRGIVRSSFPYESSCKPRSCSGSGHVA
GLLFTASLDDIGEVHSNTLIRRHRSALEEAVAGLALERPVVRGRHLSGDTENGGGGGNTL
LGGGASQSETGPEKKGGHLGGKTQIVSCVKLHSPLAGGKLEGSASTGRCPRSLEEGRDSS
DEDRNNAEAIFDFEDLELDAVKPPVKRSISCSGVTASVGKGTVKRTDIQTGDDPLSVLAA
ESESGRPGTAPRGEELGALRARRNLAREIELYLNQLDSPLSSRTPSLDLQDLASPPLLHP
APNPAFRRSSLPYGSPCRTVEMPRSHTFHQTSPAQPISPQSPWTPPLSQSSSTGASPGPS
PFQERADRMGLVSASSSSFALDTLLTPSLDVFKTGVFSAGRGVADKASRWYSRFATYTAP
TKDGHSDSLSVSSLDIGDLDSPPLLDEDDCKESKMSVVSPLNSGPVGPRRSPRRSPLHSR
PHSSASDPRRGRPTSLPAGCVLSPPDLPPPDKSDLSSSRYTSNTSIFNSCAMELLISSCS
RCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPS
VDEAMTSSYSTGMDTETSTASTPCPTTAVSPPSPSTAALQGSFDRAPGISIPTERHQGAL
SSSMTRSVTIFGPLEETSSFSPRLQTSGSLPTRLNEPVDPLNVEWSVHSPEPVTVPYLSP
LVLWKELESLLENEGDPVITEADMVDHHPIIYWNLIWYFRRLDLPSNLPGLVLTSEHCNR
DSQIPHHWMSEDSKHVLIQILWDNLKLHQDPVRPLYILWNTYNVGYSVTRPVPEEEKAFS
EEVLQSVVRSIQRNDVSRPMAQLLQLHSQTLGVRRQRSLYRDILFLSLVALGKDNIDIDA
FDREYKLAFDRLAPNLVKLTHNCDRPPSTGVMEVRRTFGEPYL
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaaggcccccgtgtagccgactactttgtggtagccggtctgacggacccc
tccaagcctttggaccaggagatccactttgatgatgtgtgccacaagactgcaaagccc
aaagctcccgtcacagacgtggctgtggtgatccggtctttgggcgaggaagcccccccg
gggttcacctgcatagagaccacaccaaccggccaatcagcggatctgaacaacggaggg
ctcatggcgcctcagatcttcctgtgctacaggcgaggccgcgacaagccgccactcacg
gacctgggggtgctgtttcagtggaaggagcggctgaagcagggctgccacctcatacag
accacgcccttcggacgctcggccaacatcagcgggaattcatcccaacgcatttacatc
acctaccgccgggctcctgatagccagccccacgctgccctggccgtcacagacatctgc
atcatcatccccagcaaaggggagacgcctccacacaccttctgcaaggtggagaagaac
ctgaacagcagcatgtggggctcctctgtgttcctgtgttacaagaagtctgtggctaaa
accaacgcggtggtgtataaagcagggttattcagcagatatccagaggaggactacgag
tcttttcctcttccagagtccgtccctctgttttgccttcccatgggggccatcattgaa
tgctggccagcaaacaccaaatactcgcttcccattttttccacctttgtcttcaccgga
gcgtctggagagaaggtttacggcgctgccatccagttctatgagccctatccgccggaa
tgcctgacaaaccagcagctctgccggctgggccttctgagtgcagaacagctttccaac
acgaaccctgccggttctagctgctccgtccacaccaacaagtgcatctgcctgctgtcc
cactggcccttcttcgatgccttccggaagttcctcacattcctgtatcgatactccatc
tccggccctcatgccctgcccatcgagaagcacatctcccacttcatgcacaaagttccc
tttccttcgtcccagaggcctcgcatcttggtccagctttctccacatgacagcctgatg
ctgagccagcctgcttcctctccattaccactcagcggaggacgcttctccacgctgctg
cagaacctgggacccgagaacgccgtcaccctgctggtgttcgccgtcaccgaacacaag
atcctggttcactcgttacggccggcggtgctgaccagcgccacagaggccttggtgtct
atgattttcccgttccactggcagtgcccttacattcccctgtgccccttggccctggct
gatgtgttgagtgccccctgtccgttcatagtgggggtggactcgcgctacttcgacctg
tatgaccctcctcccgatgtgagctgcgtggacctggacacaaacaccatcttccactgt
gaagacaagcgaggcctcacatggaagatcctgccaaagaaaccctgtaagaacctcctg
aatgttctaagcagactctaccaggagctgcttgacggtcagtgtcagcttgatgggttg
ctggagctgagcatgagcgattccccggagctgagctgtgggaaaagtcttcacacgctg
gagctggagattcgggaagccttcctgcgcttcatggctgctattctgaagggttaccgt
tctttcctcagacccataacccaagcaccttcagagaaagcaacagatgcaagctctctc
ttcgacctgcaagggtttctgaagagccgtgaccgctctcatcagaagttttactctcta
atgaccaaaacccagatgttcatccgcttcatcgaggagtgctcgttcgtcagcgacaag
gacgccagtctggtcttctttgacgaatgcgtggacaaagtggacggggagaagctggag
gacgcccggctgatagagacggatgagtcccatcgcagcgagcacaccgtcttcatcaca
cccccagagctgccccccctccctggggtggaggaacaccccctgtgctacaggtacgat
ggctttcccgtgctgagcctggacctgtttgatcccgtggcccccaccccggacggcctg
caagcaccctcgtcccgcctgtctgcccggcacagctgccccagcagccccgcccccatg
ttcagacgcaccaagcaggagatcaggtcggcccagaagatggctaagaagtactcctcc
atccctcagctgtggtccaagtgtctgctgcgccactgctacgggctgtggttcatctgt
ctgcccgcgtacgtcaaggtgtgccactccaaggtgcgggcgctccgctctgcctacgac
gtcctgcgcaagatgcagacgaagaagctgcagccccccgatgaggtctgctacagggtg
ctcatgcagctgtgcgggcagtacggacagccggtcctggccgtcagagtgctctttgag
atgaagaaggccggagtccaccccaacgccgtcacctacggatactacaacaaggcggtg
ctggagagcacgtggccttccagcaacagaggagggtacttcctgtggatgaagctcaga
aacgtgctcctggccgtggctcagttcaagcgatccctttcccggcccgcactcctcacc
cagagcccgctttcagatgtcagtgacctggatgctgtgagtcacggcagcctggatagt
tctgctgatccgggtccgtccgccgccgatgacaggtccagtacaggagatcagtctgat
ctgggctacaactccctgtccaaagaggaggtgtggagaggggcagcgcctccccaagac
agcaggaaggagagcgactgcagctccctgtcagagacggagagctccaaaggaagtagg
gactgcctcccccagctggacgcggatccctccttcaaacctcgtgggatcgtccgcagc
agcttcccgtacgagtcctcctgtaaacccaggagctgcagcggttcaggtcacgtggcg
ggtctgctcttcaccgcctccctggatgacatcggcgaggtccacagcaacactttgatc
aggaggcacaggagcgccctggaggaggcggtcgccggcttggcgctggagcggccggtt
gtgaggggccgccacctcagtggggacactgagaacggcggcggcggtgggaacaccctt
ctcggtggtggagccagccaaagtgaaactggtccagagaagaaggggggacacttgggg
ggaaaaacccaaatagtctcgtgtgtgaagctccacagtcctttggctggggggaagttg
gaaggatcggcttctaccgggcggtgtcccaggagtctggaagaggggcgggactccagc
gatgaggacaggaacaacgctgaggccatttttgattttgaggatctggagctagacgca
gtaaaaccgcccgtcaaacgcagcatcagctgcagtggcgtgaccgcctcagtcggcaag
gggacggtcaagcgcaccgacatccaaacgggtgacgaccctctttctgtcctggcagca
gagtcggaaagcgggcgcccgggaacggcgccacggggggaggagctcggagcgctgaga
gcacgcagaaacctggccagggagatcgagctgtacctgaaccagctggacagccctctg
agcagccgcacccccagcctggacctgcaggacctcgccagcccccccctcctgcaccca
gccccaaaccccgccttccgtaggtccagtctcccctatggctccccctgcaggactgtg
gaaatgccacgctctcacacttttcaccaaacgtcacctgcccaacccatctcacctcag
agtccgtggaccccccccctcagtcagagctccagcaccggcgcgagccctgggcccagc
cccttccaggagagggctgacaggatgggcctggtgtcggcctcctcctcctcttttgcc
cttgacaccctgctcacgccgagcctggacgtgttcaagaccggcgtcttctctgctggg
aggggcgtggctgataaggccagccgctggtactcccgttttgccacctacaccgctcca
accaaggacggccacagcgacagcctgagcgtgtcctccctcgacatcggagacctggac
tccccacctctgctggatgaggacgattgtaaggagtccaagatgtcagtggtctctcct
ctgaacagtggtccagtggggccccgcaggagccccaggcggagcccccttcacagcagg
ccgcacagctccgcctcagacccccgccgtggcagacccacatctcttcctgccggatgt
gtgctgtctccccctgacctcccgccgccggacaagtctgacctcagctcgtcacgctac
accagcaacaccagcattttcaacagctgcgctatggagctgctgatctccagctgctcc
cgctgtaagacctgcgactgcctggtttatgatgaggagatcatggctggctggactgcc
gacgactccaacctgaacaccacctgccccttctgcggaaaccccttcctgcctttcctc
aacgtggagattcgggacatgcgaggacctggcaggcttttcttgaagggcagtccctct
gtggacgaggccatgacgtcctcatactccacgggcatggacacggagacttctaccgcg
tccacgccatgccccacaaccgcagtctcccctccctcccccagcacagccgcactgcaa
ggaagctttgacagagctccgggtatcagcatccccactgagcgacaccagggggcgctg
tcctcctccatgacccgaagcgtcaccatcttcggtcctttagaggaaacatccagtttc
agcccccgactgcagacatccggcagcctgcccacccgcctgaacgaaccagtggacccg
ctgaatgtggagtggagtgtccacagccccgagccggtgacggttccctacctgagcccg
ctggtcttgtggaaggagctggagagcctgctggagaacgaaggagatccggtcatcacc
gaggccgacatggtggaccaccatcccatcatctactggaacctcatctggtacttcaga
cggctggacctgcccagcaacttaccgggtctcgtcctcacatcggagcactgcaacagg
gactcccagattcctcatcactggatgtcagaggacagcaaacatgtgttgatccagata
ctgtgggacaacctgaagctgcatcaggaccctgtccggcctctctacatcctctggaac
acctacaatgtgggctactcggtgacacggccggtcccagaggaggagaaggccttcagc
gaggaggtgctgcagagcgtggtgaggagcatccagaggaacgacgtcagccggccgatg
gctcagctgctgcagctgcacagccagaccctcggggtcagaaggcaaaggagtttgtac
agagacatcctcttcctctctctggtggctctgggaaaagacaacattgatattgacgcc
ttcgatcgggagtacaagttggcgtttgatcgtctggcgccgaacctggtgaagctgaca
cacaactgtgaccgtcccccgagcacaggcgtcatggaggttcggaggacgttcggggag
ccgtacctgtga
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