Oryzias latipes (Japanese medaka): 101168725
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Entry
101168725 CDS
T02443
Symbol
fbxo40
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101168725 (fbxo40)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101168725 (fbxo40)
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
101168725
NCBI-ProteinID:
XP_004075559
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Position
13:complement(6014032..6019349)
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AA seq
668 aa
AA seq
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MPKVHHEHCDKCFSAHCQVLVQTSRSCMVTKCPKNCGTVLHACKREEHVLLCPNETVPCL
NAFYGCPLTMQRQKLAKHLEVCPASVVCCSQEWNRWPVSDTNETFYRSVSEKLQSDSEVS
LDVALALRDQALLFQSIKMKCIFPEMMADELQMSASGELSCSSDFSEFTENGCAEELEEK
KEEGRHDLAKSEEVANIQNYTSWEKIFRKEKEGCNQTVKNLNKETRGKKEQEASKDQEGL
RDAADRNAVASRGLHGITGLAPWQDGVLDRLCREANMAEYNMYLVHNGSMLINFGQLAAC
TPREKDFVYGNLEPIEVKTVRSYKVPTSYRAKRVHLENPACKAKIRHQSVDTTDLGFSVE
DLPKSDEIGSALLCSMEKELKGHLISESTSTDGFYIDVGTQTHSFPSAPFRADASLTDLI
ANKHPGLHVSVETESVTRRHNRRSSAFSYECGQFFRRDEFPSHVRNAHCDIQAQLNGWFQ
QRCPLAYLGCTHTQMRFHPAGQQATITFKKDASAMALQPLVPSSLRESEKNPGGSATPQL
DILSSLPLEILQNIAAHLDSFTLSQLSLVSHLMRDVCGSLLRQRGMVFLHWTKKTYSHGG
TSWKCHKKVWRFSSLFSSVDRWSFTDVRSMSDHLQSCSFYQRDERREPVALPCLREVTDR
CREVKHRR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagtccaccatgagcattgtgacaagtgcttcagcgctcactgtcaagtccta
gtgcagacctccaggtcctgcatggtaaccaaatgtcccaaaaactgtggtaccgtcctg
catgcgtgcaaacgggaggagcatgtgcttctttgtccaaatgagacggtcccttgtctt
aatgcgttctatggctgccctctaacaatgcagcgacagaagctggccaaacacttagaa
gtctgtcctgccagcgtggtttgctgctctcaggagtggaaccgctggcctgtttctgac
accaacgagaccttttacaggagcgtgtcagaaaagcttcagtcagactctgaggtgagc
ctggacgtcgctttggctctcagggatcaagccctgctctttcagtccatcaaaatgaaa
tgcattttccctgaaatgatggcggatgaacttcagatgtcagcttcaggagagctgtcg
tgctcttcagacttcagtgaatttacagagaatggctgtgcagaggagctggaggagaaa
aaggaagaggggagacatgatttggcaaagagcgaagaagtagcaaatattcaaaattac
acctcctgggagaagattttcaggaaggagaaggagggatgcaaccaaactgtcaaaaac
ctgaacaaggagaccagaggaaagaaagagcaagaagcatcaaaggatcaggaggggctg
agagatgcagctgatagaaatgctgttgcttccagaggtttgcacggcataaccgggctc
gcgccatggcaagacggagtccttgatagattatgcagagaagccaacatggcagaatac
aacatgtaccttgtgcacaacggctcaatgttgattaactttggccagctggctgcatgc
accccaagggagaaggattttgtatatgggaatctggagccgattgaggttaagacagtc
cgctcatacaaagttcccaccagctacagagcaaagcgcgttcacctggagaatcctgca
tgcaaggccaagatcagacaccagagtgttgacaccacagatctgggcttctcagttgag
gatcttccaaaatcggatgagattggctcggcgcttctgtgctccatggaaaaggagcta
aagggacacctcatctcggagagcacttctacagacggtttctacatagacgttggaaca
caaacgcacagtttcccgtccgctcccttcagagcggatgcctctttaacagatctgatt
gcaaacaaacatcccggcctccatgtcagtgtcgaaactgaatcagtcaccaggagacac
aacagaagaagttccgcctttagttatgaatgcggtcaattcttccgccgcgatgagttc
ccgtctcacgtcaggaacgctcactgcgacatccaggcccagttgaacggctggttccag
cagcgctgccccttggcatacctcggctgcactcacacccagatgaggtttcaccccgca
ggtcaacaagccaccatcacgtttaagaaagatgccagcgccatggcgctccagccactc
gtcccttcatcactgcgggaaagtgagaaaaatcctggaggaagtgctacgccacaactc
gacatcttgagcagtctgcctttggagatcctccagaacattgctgctcacctcgacagt
ttcacgttgtctcagctgtccctggtttcccatctgatgagggacgtgtgcggcagttta
ctgcggcagaggggcatggtcttcctccactggacaaaaaagacatattctcatggagga
acttcctggaaatgccataaaaaagtctggaggttcagctctctgttttcctcggtggac
cgctggagcttcacagatgttcgctccatgtctgatcacctgcaaagctgctccttctac
cagagggatgagcgcagggagccggtggccttgccctgcctcagggaggttacagacaga
tgcagagaagtcaagcatagaagatag
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