Oryzias latipes (Japanese medaka): 101168760
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Entry
101168760 CDS
T02443
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101168760
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
101168760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
101168760
NCBI-ProteinID:
XP_004084058
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All DBs
Position
24:complement(23119068..23147661)
Genome browser
AA seq
690 aa
AA seq
DB search
MSSRVCKTCGGGDIDVDQARGSAVCTSCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPVKAPLLGSGFHTSVGKESRAQTLQNGKRQIQKLGSQLQLNQHCLDTAFNFFKLAVSK
HLTRGRKTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGLKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRSVKDVISVVKVCHTTLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSYTAGQHK
VKMLQLEQELTKKLDEVEGEISCYKDEIENELEKSRPKLRGIYAAYSKEIAPENEEALSS
TSEEADGEDMELQAASEHLTQDFLSQVIQEVNERQDKRQGSCNPEVESENKVTHLSTIQE
TLLNTASLCLQETFHTLENSGMENKVDNPMEPSGELDLEGIDDQEIEKYILNEKEVEVKT
GLWMKQNAEYLQEQKEKEERINKEKEQGIYKEKQKKKYRKREQIEASTAEEAIEKMLEKK
KISSKINYDVLRDLNTGAGSPSPLSPDPPKGSSAQKRLSRRRRRKTSDTNQDLAANATIM
GKRFRHLISTSPKKKTPAQSIQVEPAVTIATHSTEPPDSVPDAGFTPSAALPPAEEDEEE
EEEEEVEKECVSALQLVGDYGCEAEEEEVF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgggtgtgtaagacttgtggagggggtgacattgacgtggaccaagcccgg
gggagcgccgtgtgcaccagctgtggttctgttctagaggacaacatcatcgtctcagag
gtccagtttgtggagggcagtggaggcgtgtcttctgctgtgggacagtttgtgtctgct
gatggtccagtcaaagctcccctgcttggttctgggttccacaccagtgttgggaaggag
tctcgtgctcagaccctgcagaatggtaagcgtcagatccagaagcttggcagccagctt
cagctcaaccagcactgcctggacacggccttcaacttcttcaagctggcggtcagcaag
catctgacacgaggacgcaagacggagcatgtcattgccgcctgcctctacctggtgtgt
cgcacagaggggacgcctcacatgctgctggacctgagcgacctgctgcaggtgaatgtt
tacgtcctgggaaagacatttctgctgctggctcgagagctgtgcatcaacgcgcccgcc
atcgacccctgcctgtacatccctcgctttgctcacatgctggagtttgggctgaagact
cacgaggtttccatgacagctctacgcctccttcagaggatgaagagagactggatgcac
acagggcggcgtccttctggactgtgtggtgcagcactcctggtggccgctcgaatgcac
aagtttcgtcgttcagtgaaggatgtgatcagtgtggtgaaagtctgccacaccaccttg
aggaagaggttgacagagtttgaggacacgcccactagtcagctgacaattgatgagttc
atgcgggtggatctggagcaggagtgtgaccccccctcctacactgctggacagcacaaa
gtaaagatgctgcagcttgagcaagagctcaccaagaagctggatgaggtagaaggagaa
atcagctgctacaaagatgagattgagaatgagctggagaaaagtcgtcctaaacttaga
ggcatctacgctgcctactccaaagaaatagcccctgagaatgaagaggcgctctcgtca
acctctgaggaggcagacggggaagacatggagctccaggcggccagtgagcacctgaca
caggacttcctgtcccaagtaatccaggaggtgaatgagaggcaagacaagaggcaaggt
tcctgcaaccccgaggtggagtcagagaacaaggtcacccacctgtccaccatccaggaa
acactgctgaacactgccagcctgtgcctccaggaaacctttcacaccttggagaattca
gggatggagaacaaagtggacaaccccatggagccaagcggagagctggacctggaaggc
attgacgatcaggagatcgagaagtacatcctgaacgagaaggaggtggaggtgaagaca
gggctgtggatgaaacagaacgcagagtatctgcaggagcagaaagagaaggaggagagg
atcaacaaggagaaggagcagggtatctacaaagaaaagcagaaaaagaaatatcggaag
cgggagcagattgaggcatcaactgcagaggaagccattgagaaaatgctggagaagaaa
aaaatctccagtaagatcaactacgatgttctcagagacttgaacacaggggctggaagt
cccagccctttgtcccccgacccgcccaaaggctcttctgctcagaaacgactcagtcgc
cgtcgccgcaggaagaccagcgacaccaaccaagacctggctgctaacgccaccatcatg
gggaagaggttccgccacctaatctccacatcaccaaagaagaagacacctgctcagtcc
attcaggttgaacccgcggtcaccatagcaacacattcaacggagccacctgatagcgtt
ccagatgcaggcttcaccccttcagctgctctaccgcctgcagaggaagatgaagaagaa
gaggaagaggaggaggtggagaaagaatgtgtcagtgccctgcagctcgtaggagattat
ggctgtgaggcagaggaggaagaggtattttag
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