Oryzias latipes (Japanese medaka): 101168824
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Entry
101168824 CDS
T02443
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X10
KO
K06084
F-box protein 20
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101168824 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101168824 (lmo7)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
101168824 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101168824
NCBI-ProteinID:
XP_020568652
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All DBs
Position
21:8276005..8343693
Genome browser
AA seq
1154 aa
AA seq
DB search
MGSRPHSDSSDTTLKGSSEGCYSEEEIDTIIRMAQNRDSKGYRRITNILPSVSADYNRFL
PTKDKPSGYVPPPLRKKRGERNEDNRRSLNYGSMEDEGQITSKPPLLGSIPGSKSTSDID
ADAMALRQLRFEELQKYREQIKESDDKWQDDLTKWKNRRRSVNSDIAKKKEEREKIEQIT
YGDDRRSKTFKEMQEERESKTKNRISSRLASLSFLHDSEDDSEAPVISPLSRTHLSRSYT
IDAPYFSSQPSEPSVKPEDSPASSPLPFQPSPPTSQQVADKAVASPTAATPASRSSVLSS
TTPKAPSLQRSQAVDDPGTTREAQSTNTASIPSSAQKAPEPKPPLLGTQAKAEAPPLALH
KEEPQLNSMQPKPPEFSWVSSSLPRSYQKSDSLRLTSVVTPRPFGTQSSRISSLPRAQTM
DNSHQRVNGSASIPQKTSVPSRYQQFMTSEDEAQSSSAQSSEEEEKDEVKEDERPKEMSI
TSDSPASPLMNSQTKQENFCEMRVNLNQKPNSSRDFGFQSNWDSKGVRVSSIQPESSAEM
CQLQVGDEVLTINGHKVAEMSYTEWKTCMDQALQEGSLVMDVRRHGQNNWVRDEPSLPYK
SHRTINLTSTDHPTILGPPGTKTVSSSLDLTSHIPPETVPSKEAPAKTAVGVASNGVNGS
LHEEPVTMRNKESEPISLKNLKRRSEFFEQGGSESSVSALTYLCGGSNSSMPDITVPAIT
PPSNRWTWDPEEERRRQEKWQMEQERLLQEKYMRDQQKLQEEWHKAQQDISTSMGQQEHL
EVNSNNVGTHFPLSSSSVPQTAPPAWEEEERKRKEEQERQRQEEERKKREEQERDLLRLE
EQRKRREVQEEQRRRQEAAEQERREKEKALEQQQQWGGHLHGFASVQQPLSFTDRAKSKS
SPQLDEDEEGQRRGSSADFKSYQPLSQAELERQQILNKMKKKTSLQRDGSWIRQGSTTTP
TSKGESDPQFMRRGESLDNLDYDSHRSSWSPRSNSFVQNYSQTQHGLYGNSSGYGGGLRA
QRPVSVTLPYSQSMGSLRGGAGTHTFPWSRQSSSTSTLSPTTPDPLPEGDSRQQRSRSVS
GKNICSLCDTPLGKGAAMIIESLGLYFHLDCFKCIDCNSSLGGSEAGAEVRIRNQQLYCN
SCYIQAKIRQPTSM
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccgccctcacagcgactcgtctgacaccactctgaaaggcagcagcgagggt
tgttacagtgaagaagaaatagacaccatcatcagaatggctcagaacagggactccaag
ggctaccgcaggattacaaacatcctacctagcgttagcgctgattacaaccggttcctg
cccaccaaagacaagccgtccggctacgtaccgcctcctctgaggaagaaacggggcgaa
cgcaatgaagacaaccggcgcagcttgaactacggcagcatggaggatgaaggccaaatc
accagtaagccacccctgctaggaagtattccggggagtaaatccaccagtgacattgac
gcggatgccatggccctccggcagcttcggttcgaagagctgcagaagtaccgtgagcag
atcaaggagagtgatgataaatggcaggatgacttgaccaaatggaaaaaccggcgacga
agcgtcaactcggacatagcgaagaagaaagaggaaagagagaaaattgagcaaattacc
tacggcgacgacagaaggtccaagaccttcaaggagatgcaggaggagagggaaagtaaa
acaaagaaccgcatcagcagtcgcctcgcttcgctttcctttctgcatgacagtgaggac
gactccgaggctcctgtcatcagcccactttcccgcacgcatctttccagaagctacact
atcgacgctccatatttttcatcccaaccctctgagccctctgtgaagccggaagattcc
ccagcttcctccccgcttccttttcagccatcgcctcccacttcccagcaagttgccgac
aaggctgtcgcatctcccactgccgccactccggccagtcgcagctcggtcctcagctcc
accactcccaaagctccgtctttacagaggagtcaagcagtagacgaccccggcacaacc
agagaggcacagagcacgaacactgcctccattcccagctctgctcagaaggcacccgag
ccaaagcctccattgttgggcacacaggccaaagcggaggcccccccactcgctctgcac
aaagaggagccgcagctgaactcaatgcaacccaagcctcctgagttttcttgggtttcg
tcctccctccccaggagctatcagaaatctgatagcttacgcctaacctcagttgtcaca
ccaaggccctttgggacccaatcatcccgcatcagctctcttcccagagcccaaacaatg
gataactcccatcagcgtgtcaatggcagtgccagcattcctcaaaagacctcggtgcca
agccggtatcagcagttcatgacgtcagaggatgaggctcagtccagctcagcacaaagc
agcgaggaagaggagaaagatgaggtgaaggaggatgagaggcccaaagaaatgagcatc
accagtgattcacctgccagtcctttgatgaatagccaaaccaagcaggagaacttctgt
gagatgcgcgtcaacctgaaccagaaacccaacagcagcagagactttggattccagtca
aactgggactcgaaaggagttcgtgtctcatccatccagccagaaagctcagctgaaatg
tgccagctccaggttggagatgaggttctgacaatcaacggccataaggtggcagaaatg
agctacacagagtggaagacctgcatggatcaggccctgcaagagggcagcctggtcatg
gatgtccgccgtcatggccaaaacaactgggtcagagacgaaccttccctgccatataaa
agccatagaaccatcaatctgaccagtacggatcatccgacaattctaggtccccctggc
acaaaaactgtcagttccagcctggatctcacctcccacattcccccggagaccgtgcca
agcaaagaggcccccgctaagaccgctgtcggggtggcgtcaaatggagtgaacgggagt
ctccacgaagaaccggtgaccatgaggaacaaagagtcagaacccatatctttgaaaaac
ttaaaacggaggtcagagttttttgaacaaggtggctcagagtccagcgtcagtgcgctg
acctacctctgtggaggatcaaactcctctatgccagatataactgttcctgccatcact
ccaccatccaaccgctggacgtgggacccagaagaggagcgcagaaggcaggagaaatgg
cagatggaacaagagcgccttctacaggaaaaatacatgcgcgatcagcagaagttgcag
gaagagtggcacaaggctcagcaggacatttctacaagcatgggccaacaagagcatctc
gaggtgaacagcaacaacgtcggcactcacttccctctgtcctcctcctccgtcccccaa
accgcacctccagcgtgggaagaggaagagaggaagaggaaggaggaacaagagcgccaa
agacaggaggaagagaggaagaagagggaggagcaggagcgtgatctgctgcgcctcgag
gaacagaggaagaggagggaggtgcaggaggagcagaggaggcgacaggaagctgcagag
caggagcgcagggagaaggaaaaagctctggagcagcagcaacagtggggtggacacttg
catggctttgccagtgtccagcaaccactgtcctttacagacagggcaaagtccaaatca
tctcctcagcttgatgaagacgaggaaggtcagaggagaggctctagtgcagactttaag
agttaccagcctctgtcgcaggctgagctggagcgccagcagatcctgaacaagatgaag
aagaagacatcactgcagagggacggcagctggatccgtcagggctccaccaccactccc
accagcaagggggagagcgacccccaattcatgcgcaggggtgaatctctggacaacttg
gactacgactctcaccgttcatcgtggtcccctagaagcaactcttttgtccagaactac
tcccagacccaacatggtctctatggcaactcctctggctatggtggtgggctcagggcc
cagcggcccgtctccgtcactttgccttactctcagtctatgggctccctcagaggtggg
gcaggaacccacacattcccctggtcccgacaatcttcctccacgtctactttatctccc
acaactcctgatcccttacccgaaggagattcccgccagcagcggagcaggtcagtgagt
ggaaagaacatttgttcactctgtgacacgcctctgggaaaaggagcggccatgatcatc
gagtccctggggctctattttcatttggattgctttaagtgtatcgattgcaattcgagc
cttggaggatcagaagccggggccgaagtcagaatacgaaaccaacagctctactgcaac
tcctgctacatacaagccaaaatcaggcaaccaacatccatgtga
DBGET
integrated database retrieval system
