Oryzias latipes (Japanese medaka): 101168827
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Entry
101168827 CDS
T02443
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101168827 (dcaf5)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101168827 (dcaf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
101168827
NCBI-ProteinID:
XP_023807412
UniProt:
H2LZZ8
LinkDB
All DBs
Position
22:1498716..1506295
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AA seq
759 aa
AA seq
DB search
MTGCGMRCSVGFLSRRELTGQPLLKEEFQRRRLAGCTSLYKKDMLGHFGCVNAIEFSNSG
GEWLVSGGDDRRVLLWHMEKALHGLAKPVKLKGEHLSNIFCLAFDSSNTKVFSGGNDEQV
ILHDVERRETLNVFLHIDAVYSLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEPFCLAS
YPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPRSSLLRYGGSMSLQSAMSVRFNSTG
TQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLY
MWKIPKDPEAGGPGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKVWSPYQQ
PDSQGDLEGRVEDKCRSLYTHEEYISLVLHSGTGLAHDYVSQSIREDPRMMAFFDSLVRR
EIEGWSSDSDSDLSEEAIMQLHARGRRSTRAAAAAAPAAAADPRTDSGNSSSSSLAGPDA
SGGEEQAGDGDDGEDGEERPRRRSRRPSGLPEDSDSSEFWLDPMPRPRSPSPRDNSVLSS
PASSPSLPAGASSPSTSTSSSSSDDEEWRSAVRRRNVMRRRRMNVASRAGERPESVQALF
SPLDSCSYPSISVEDPSSSSTDEGKNSAQAKPQSCPAKDEDSRLSPSDFVCHSPEMAPES
QEGGGHEVGEPTGSTDPHRTATYGSDSREACTASQSPEVNGQHRPASPAIGGVSSDSEEA
AGLSTEDVRLQSEKGAAKKRTHAGAHPSGSSPSEKKLKT
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctgcggtatgcgctgctcggtgggctttctgtcccgcagagagctgacgggg
cagccgctcctgaaggaggaattccagcggcgcaggctggcgggctgcaccagcctctac
aagaaagacatgctgggacacttcggctgcgtcaacgccatcgagttctccaacagcggc
ggagagtggctggtgtccggaggagacgaccggcgggttctgctgtggcacatggagaaa
gccctccacggtctggccaagccggtcaagctgaagggcgagcacctgtccaacatcttc
tgcctggccttcgacagctccaacaccaaagtcttctccggcggaaacgacgagcaggtg
atccttcacgatgtggagaggagggagaccctgaacgtcttcctgcacatcgacgccgtc
tacagcctgtccgtcagccccgtcaacgacaacgtcttcgccagctcgtctgacgacggc
agagttctcatctgggacactcgcgagccgccacatggagagcccttctgcctggccagc
tacccctcagccttccacagcgtcatgttcaaccccgtggagccgcggctgctcgccacc
gccaactccaaggagggcgttggattgtgggatatccgcaagccgcgcagctcgctgctg
cgttacggcggcagcatgtccctgcagagcgccatgagcgtccgcttcaacagcacgggc
acgcagctgctggcgctgcggcgccgcctgccgcccgtcctctacgagctgcactcccgc
ctgcccagcttccagttcgacaaccagggttacttcaactcctgcaccatgaagagttgc
tgcttcgccggggaccgcgaccagtacatcctgtccggatcggacgacttcaacctttac
atgtggaaaatccccaaggacccggaagcaggaggcccgggtcgagtggtgaacggggcc
ttcatggtcctgaagggtcatcgctccatcgtcaaccaggtccgcttcaacccccacacc
tacatgatctgctcctccggagtggagaaggtcatcaaggtgtggagtccgtaccagcag
ccggacagccagggcgacctggagggccgggtggaggacaagtgccgcagcctctacacc
catgaggagtacatcagcctggttctgcacagcggcaccggtctggcccacgattacgtc
agccagtccatccgcgaggatccgcgcatgatggcgttcttcgactccttggtccggcgc
gagatcgaggggtggagctctgactctgacagcgacctgagcgaggaggccatcatgcag
cttcacgctcgcggccgccgctccacccgcgccgctgccgccgcagctcctgcagcagct
gccgacccccgcaccgactcgggtaactcctcctcttcctcccttgccggaccggacgct
tcaggaggcgaggagcaagcaggagacggagacgacggggaggacggggaggagcgtccc
aggaggcggagcagacggccatccgggctgccagaggactcggactccagcgagttctgg
ctcgatccgatgccgcgaccgcgatccccgagcccgagggacaattctgttctgtctagc
cccgcctcctctccttcgctccccgccggagcctccagcccctccacctccacgtccagc
tccagcagcgacgacgaggagtggcgcagcgccgtcaggcgccgcaacgtcatgaggcgg
cgccgcatgaacgtggcgtccagagccggggagcgacccgagtccgtgcaggctctgttc
tcccccctggactcctgcagctacccctccatctcagtggaggacccctcctcttcctcc
acagacgaaggaaagaactctgctcaggcgaagccccaaagctgtcccgccaaagacgag
gacagccgtctgagcccttcggactttgtgtgccacagtccagaaatggcccccgagagc
caggagggcgggggccacgaggtgggggaacccaccgggtcaacggacccccaccggacc
gccacgtatggatccgacagcagagaggcgtgcaccgcctcccagagcccggaggtgaat
ggacagcaccggcccgcctcacctgccatagggggcgtgtcctcagactcagaggaagcg
gcaggactttcaactgaggacgttcggctgcagagcgaaaaaggagcagcgaagaaacgg
actcatgcgggggcacatccgtcaggctcctccccctcagaaaagaagctgaagacataa
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