Oryzias latipes (Japanese medaka): 101168871
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Entry
101168871 CDS
T02443
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101168871 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101168871 (utp15)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101168871 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
DUF7099
Beta-prop_HPS5
PTP_tm
Motif
Other DBs
NCBI-GeneID:
101168871
NCBI-ProteinID:
XP_004072205
UniProt:
H2L9R4
LinkDB
All DBs
Position
9:complement(5946432..5954401)
Genome browser
AA seq
528 aa
AA seq
DB search
MASYKPTNIPVYPKLGEKITEETLYWKNYKTPIQIKEFGAVSNIHFSPVTPYNFAVTAFT
RIHLYGLLSQEPVKTFTRFKDTAYCGRFRSDGQLLVAGCEDSVVRLFDVSGKVALRMFKG
HTKAVHVTDFTTDRYQILTGSDDYTCCLWDIPNSAQLNTYQEHTDYIRCGVTSQLNRDLF
VTGSYDHSLKVFDARVDKSVMTINHGHPVESLLLYPSEGLLVSAGGRYVRVWDLLKGGQP
LVSLKNHHKTVTCLALSSNGQRLLSGSLDRHVKVYNTTSYKVVHNFDYPAAILSLALAPE
DESIVVGMTNSILSIKHRKPSEEAKETAGHQRRRPSYRVYAHRKSYVPKQDDYLVSKPVR
QHLAKYDKQLKKFNVSKALDTALETWIRGRKPEITVAVIRELDRRGTLKNALAGRDEQEL
SRLLSFLIANLVDARFAPVLITAAEMILDIYQSIVGQSPVVDKQLLHLQSLLERELDYQK
DLLEVLGMLDTMFASSLPKVELPCSGISTSNGLPQGESTASRPQVQVN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatataaaccaacaaacattccagtttatcccaaactcggagagaagatcaca
gaagaaacactgtactggaaaaactacaagacgccaatccagataaaagaatttggagct
gtgtcgaacattcacttttcccctgtgactccctataattttgctgtgacagctttcaca
agaattcacctttatgggctgctctcccaggagcctgtcaagacatttacccgtttcaag
gacactgcatactgcggccgtttccgatcagacggtcagctgcttgtggcgggatgtgag
gactccgtcgtgcgactttttgatgttagcggcaaagtggcactgaggatgttcaaaggt
cacacaaaggccgttcatgtcacagactttaccaccgaccgttaccagatcctgacgggg
tcggacgactacacctgctgcctttgggacattccaaactcggctcagcttaacacttac
caggaacacacagattacatccggtgtggagtgacgagtcaactcaacagagatctcttt
gttacaggatcatacgaccactcactaaaagtgtttgatgccagagtggataaaagtgtg
atgaccatcaaccatggccacccagtggagagtctgcttctgtatccctctgaggggctg
cttgtttctgcaggcgggcgctacgtgagagtgtgggatctgctaaaaggcgggcagccg
ctggtgtctctgaagaaccatcacaaaacagtcacctgtttggctctcagcagcaacgga
cagaggctgctgtccggctctctggacagacatgtaaaggtgtacaacacaaccagctac
aaagtggtccacaacttcgactaccctgctgccatcctcagtctggctctggctccggag
gatgagtccattgttgtgggaatgaccaacagtattctgagcatcaaacacagaaaaccc
tcggaggaggcaaaggaaacagctggccaccaaaggcgacgcccatcgtatcgcgtttac
gcacacagaaaaagctatgttccaaaacaggacgattatcttgtcagtaagccagtgagg
cagcatttggccaaatatgacaagcagctaaagaagtttaatgtgtccaaagctttggac
acggccttggagacgtggattagagggagaaagccggagataactgtcgctgtcataagg
gagctggatagaagaggaactttgaaaaacgctctcgcaggacgggatgagcaggagctc
tcgcggttactcagctttctgatcgcaaatctggttgatgccaggtttgctcccgtcctc
ataacagcagctgagatgatcctggacatctatcagtccatcgttggtcagtccccagtt
gtggacaaacagctgctgcatctgcagtccttgctggaaagagaactggactatcaaaag
gaccttctggaagttcttggcatgttagacacaatgtttgcctcctctctgcctaaagtt
gagttgccgtgctctggcatcagcacatctaacggcctgccgcagggagaatcgactgca
tcaagaccacaggttcaggtcaactga
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