Oryzias latipes (Japanese medaka): 101168881
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Entry
101168881 CDS
T02443
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04145
Phagosome
ola04510
Focal adhesion
ola04512
ECM-receptor interaction
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101168881
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101168881
09144 Cellular community - eukaryotes
04510 Focal adhesion
101168881
09142 Cell motility
04820 Cytoskeleton in muscle cells
101168881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101168881
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101168881
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101168881
Membrane trafficking [BR:
ola04131
]
Endocytosis
Phagocytosis
Opsonins
101168881
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101168881
Exosomal proteins of colorectal cancer cells
101168881
Exosomal proteins of bladder cancer cells
101168881
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101168881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_3
EGF_CA
EGF
cEGF
EGF_MSP1_1
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
101168881
NCBI-ProteinID:
XP_004074610
UniProt:
H2LJP8
LinkDB
All DBs
Position
12:8619083..8638134
Genome browser
AA seq
939 aa
AA seq
DB search
MDMWRTLLLTSQLLLNLCLHVEAQALVYDLLTSPDCLPDLLQGGLIEQGVNEAFILTSFK
LQPKSGTTVFSLYNPRDNSKYFEFTVMGKLNRAVLRYLRSDRRMSSVTINNLVLADGQKH
RLLFHLRGLQQQGPGGLELHLDCRLVETVRDLPAAFQGLPTGYGTVQLKTMQPREQESLD
ELKLAVGDSFESVASLQDCHFQQRDSVQTLGVNTKQLSNQMMELTKVINELKDVLIQQVK
ETSFLRNTISECQACDLGGSEVVKPKCSPGVCFRDDMCIETANGVECAACPDGYTGDGFN
CDDVDECQFNPCYPGVKCVNTAPGFRCDACPLGYIGLPVEGVGIVFAQTNKQVCDDIDEC
KGPSNGGCPANSNCENSMGSYHCSCKTGFIGDPVKGCKPEVSCGNSLTNPCHANASCVLE
RDGSISCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDAHCRKDNCIYVPNSGQEDADRD
GQGDACDEDADGDSIPNELDNCWLKPNVDQKNSDSDSHGDACDNCRLAKNPDQRDTDGDG
KGDACDDDMDGDGLKNFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDIDSDLV
GDSCDTNQDSDGDGHQDTKDNCPYVINSSQVDSDKDGLGDECDDDDDNDGIPDVLPPGPD
NCRLVPNPDQMDDNDDGVGDVCESDFDQDKVIDRIDICPENAEVTLTDFRAYQTVVLDPE
GDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFG
YQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKTGPGEHLRNSLWHTGDTNH
QVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGTELVADSGVTIDTTMRGGRL
GVFCFSQENIIWSNLKYRCNDTIPEDFQEFRAQHAVDPI
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtggaggactctgcttctgacctcgcagctgcttttaaatctctgcttgcat
gttgaagcacaagctttggtctatgatcttctcacctcgcctgattgcctgccagacctg
ctgcaagggggtctgattgaacagggggtgaacgaagccttcatcctgacctcctttaag
ctgcagcccaaaagcgggaccactgtgtttagtctctacaaccctagggacaacagcaag
tactttgagttcactgtgatgggcaagctaaaccgagctgtattacgctacctccggagc
gacagacggatgagctctgttaccatcaacaacctggtgctggccgacggccaaaaacac
cgactgctgttccacctgagggggctgcaacagcaggggccaggcgggttggagctgcat
ctggactgccggctggtagaaacagtccgggatctccccgctgccttccagggtttgccc
acaggttatggtacagtacagctgaagacgatgcaaccaagggagcaggaaagcttagat
gagctgaagctggcagttggagattcatttgagagtgttgcgtcattacaagactgccat
ttccagcaaagagactctgttcaaactctgggggtcaacacaaagcagctgtcgaatcaa
atgatggagttaacaaaggtgattaacgagttaaaggatgtcctcattcagcaggttaaa
gaaacctcctttctcagaaataccatctcagagtgccaggcgtgtgatttgggtggcagt
gaagttgtgaaaccaaagtgtagcccaggcgtctgcttccgtgacgacatgtgcatcgaa
acagcaaatggcgttgagtgtgccgcctgccctgatggatacactggagatggcttcaac
tgcgatgatgtcgacgaatgccagtttaacccttgctatccgggagtgaagtgtgtgaac
acagcgccggggttccgatgtgatgcctgtccgcttggctacatcggcctgccggtggag
ggtgtggggatcgtgtttgcccagaccaacaaacaggtttgtgatgacattgatgaatgc
aaaggacccagtaatggaggctgtcctgcaaactcaaactgtgagaactccatgggctcc
tatcactgctcctgcaagacgggtttcattggagaccctgtgaagggctgcaagccagag
gtcagctgtggaaacagcctgaccaacccgtgtcacgccaacgcctcgtgtgttctggaa
agagacgggtccatttcttgtcagtgtggaatcggctgggctggaaatggatatttgtgc
gggaaggacacagatattgatggatatccagatgagaaactcaaatgtaaagatgcgcac
tgcaggaaggataattgcatatatgttccaaactctggtcaagaggacgcagacagggat
ggccaaggagacgcctgcgatgaagatgcagatggggacagtattcctaatgaactggac
aactgctggttaaagcccaatgtggaccagaaaaacagtgacagcgacagccacggtgat
gcatgtgacaactgtcgtctggctaagaaccctgaccaaagggacactgacggcgatggc
aaaggtgacgcctgcgatgacgacatggatggagacggtctgaagaacttcctggacaac
tgccagcgcgtccagaacagagaccagctggaccgggatggagacggagtgggagatgcg
tgtgacagctgcccagacatccccaacccaaaccagtctgacattgacagtgatctggtt
ggagactcctgtgacacaaaccaggacagtgatggagacggtcaccaggataccaaggac
aactgcccatacgtgattaacagctctcaggtggactctgacaaagacgggctgggggac
gagtgcgacgacgatgacgacaacgacggcatcccagatgttttaccaccgggaccggac
aactgccggctggtgccgaaccctgaccagatggatgacaacgatgatggcgttggagac
gtgtgcgaatccgactttgatcaggacaaggtgattgacaggattgacatctgtcccgag
aacgctgaggtcaccctgaccgacttcagggcgtatcagacggtggtgctggaccctgaa
ggcgacgctcagatcgatcctaactgggttgttctgaaccagggaatggagattgttcag
acgatgaacagtgacccaggacttgctgttgggtacacggctttcagcggagtcgacttt
gaagggacgtttcacgtgaacaccgtcaccgatgatgactatgcaggcttcatctttggc
taccaggactcctcctccttttacgtggtgatgtggaagcagacagagcaaacctattgg
caggcaactcccttccgggctgtggctgagcccggcattcagcttaaggctgtgaaatcc
aaaacaggccccggagagcatttgaggaactccctgtggcacacaggagacaccaaccat
caggtccgtctgctgtggaaggatcccaggaatgtcggctggaaggacaaggtttcctac
cgctggtatctgcagcaccgcccacaagttggatacatcagagcacggttttacgaggga
actgagctggtggcagactccggtgtgactattgacacgaccatgagaggaggacgactt
ggcgtgttctgtttctcacaagaaaacataatctggtcaaacctgaaataccgctgcaat
gacacgatcccggaggactttcaggagttcagagctcagcatgctgtggaccctatttaa
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integrated database retrieval system
