Oryzias latipes (Japanese medaka): 101168924
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Entry
101168924 CDS
T02443
Symbol
rfx1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101168924 (rfx1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Other basic domains
RF-X
101168924 (rfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
Motif
Other DBs
NCBI-GeneID:
101168924
NCBI-ProteinID:
XP_011477294
UniProt:
H2M8H1
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Position
1:28659008..28675330
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AA seq
832 aa
AA seq
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MATCSYSDDLQPQQVDGVTIATPATTTPSSVKTTHFLSEVLPTSGAISAAVQSATISKPR
QDALCSQAAPTQARSQRPVVLATSTQQYVNREVQHSVVQKSNGQSSPPQYLIVTVTEGSA
HSNDSLSDSSPSAPGVPTQAVQPPQQRSVLQAASQSAKRNQTSHVGNLQSLHISQEVERV
FTGQVQYVDGAGESSFPASTIRSNTYPFSDPVIFSQTSSTSSSNFYEATPSPGSDIAGSV
IAQPVAVATAGGSGGDAAGGGEYAIPVGYIIGGEAAGSAGGSHNYGSPNSRAPPATVQWL
CENYEGAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFVGLRTRRLGTRGNS
KYHYYGLRIKSGSPLLRLMDEQQHMAMRQQPFSQKSRIKPVQKAPGLSNGIAGGIGQLQP
GAPGDISTQVQQYQQFLETSRPLPEFVDIDLQGQSLPDGIQLEHLKVFRDLYREHCEAVL
DVMINLQFNVVEMLWKSFWRFSESNNPESPDLPDDAENCLPKSLLVLLCKFEPVLLWTRW
CDNLLYQALVDALIPDVLRPIPSALTQAIRNFAKNLESWLTGAMMNIPEEMVCIKVVCVS
SFSQTLRRYTSLNHLAQAARAVLQNSAQINQMLSDLNRVDFSNVQEQASWVCQCEDGVVR
RLEQDFKATLQQQNSLEQWASWLDGVVSEALKPFEQNPAALSKAAKVFLLNWSFYSSMVI
RDLTLRSAASFGSFHLIRLLYDEYMYFLVEHRVAQAKGEPPVAVMAEFSNSAKSRSSPDL
DKEEEEEEEEDSEEESAEMVLPSGSLGVCDEPPPAKQARTGLNLHALTDTHS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttgtagttactctgatgacctgcagcctcagcaggttgatggtgtaaccata
gcaacgcctgccaccaccacaccttcatcagtaaagaccacacatttcctgtctgaggtc
ttgccgacttctggagccatttctgcagcggtccagtcagccaccatctcaaaaccccga
caggatgcactgtgttctcaagctgcacccacacaggctcggagccagaggccggtcgtc
ttggcaacttccacgcagcagtacgtcaaccgggaggtccagcactccgtggtccagaaa
agtaacgggcagagcagcccgcctcagtacctcatagttacagttacagagggctctgct
cactccaacgacagtctgtcagactctagcccgtcggcccccggtgttcccacgcaggcg
gtgcaaccacctcagcagaggtcagtgctgcaagcggcgtcacagtcagccaagaggaat
cagacgagccacgtcggcaacctgcagtcactgcacatcagccaggaggtggagcgtgtg
tttacgggtcaggtgcagtatgtggatggagcaggagaatcatctttccccgcctccacc
attcgatccaacacctaccccttctccgaccctgtcatcttctcccagaccagttctacg
tcctcttccaacttttatgaggccacacccagtccagggtcagacattgccggctctgtg
atcgcacagcccgttgctgtggcaacagccggaggtagtggcggtgatgctgcaggtgga
ggggagtatgccattcctgtaggctacataataggaggagaagcagcaggctctgcagga
ggaagtcacaattatggcagccccaactctcgagccccacctgctactgtgcaatggctg
tgtgagaactatgagggggctgagggagtcagtttaccccgctgtaccctctattaccac
tacctgctgcactgccaggagcagaaactggaacctgtcaatgccgcttcctttgggaaa
ctgatcaggtcggtctttgtggggctgcgaacccggagactaggaaccagaggaaactcc
aagtaccactattatggcctgaggatcaaatctggctctcctctgctcagactgatggac
gagcagcagcacatggccatgaggcagcagcctttctcacagaagagcaggatcaaaccc
gttcagaaagctccagggctgtccaatgggatcgcaggtgggataggccagctccagcca
ggagcacctggagatatttccactcaggtgcaacagtatcagcagttccttgagacctcc
aggcctttaccagagtttgtggacattgatcttcaaggtcagtctttgccggatgggatc
cagttggagcacctgaaggtctttcgggatctgtacagagagcattgtgaggctgttctg
gacgtcatgatcaacctgcagtttaacgtcgtggagatgctctggaaatccttctggagg
tttagtgagagcaacaatcctgaatcccctgacctgcccgatgatgcagagaactgtctg
cccaaatccttgctggtgctgctgtgcaagtttgaaccggtgctgctgtggaccaggtgg
tgtgacaacctgctgtaccaggcgctggtagacgccctcatccctgacgtgctcagacct
atccccagtgccttaactcaggccatccgaaactttgccaagaatctggagagttggctg
acaggagccatgatgaacatcccagaggagatggtttgcatcaaggtggtgtgtgtcagc
tcgttctcccagacgcttcggcgctacaccagcctgaaccacctggcccaggctgcccgg
gccgtcctccagaactcagctcagatcaaccaaatgctctctgacctcaaccgagtcgac
ttcagtaatgtgcaggagcaggcgtcctgggtgtgtcagtgtgaggacggcgtggtgcgg
cgtctggagcaggacttcaaagccacgctgcagcagcagaactctctggaacagtgggcc
tcctggttggacggcgttgtgtccgaggccctgaagccctttgagcagaaccctgctgct
ctgtccaaagctgccaaagttttcctgctcaactggtccttctacagctccatggtcatc
agagacctgactctacgcagtgctgctagttttggctcctttcacctgatccggttgctc
tacgacgagtacatgtacttcctggtggagcaccgggtggcccaggccaaaggagagccg
cccgtcgctgtgatggcagaattttccaactctgctaagagcagaagctctccagatctg
gataaagaagaggaggaagaggaggaggaggacagcgaggaggagagcgcagagatggtg
ctgccttcaggctcccttggagtttgtgacgagccgcctccagccaagcaggccaggacg
ggtctgaatctgcacgcgctcactgacacccatagctga
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