Oryzias latipes (Japanese medaka): 101169104
Help
Entry
101169104 CDS
T02443
Symbol
lrig2
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
Ig_2
ig
LRR_4
LRR_5
LRR_1
V-set
C2-set_2
LRR_14
LRR_9
C2-set_3
C1-set
LRRNT
LRRCT
Motif
Other DBs
NCBI-GeneID:
101169104
NCBI-ProteinID:
XP_011473339
UniProt:
H2LTP4
LinkDB
All DBs
Position
5:15023352..15039065
Genome browser
AA seq
1064 aa
AA seq
DB search
MAEGWPIPRAFVVMMLCVGAWAGYSSCPAPCSCSKRQDDLEIVDCNRKKLLVPPQDLPER
TTHVTMNHNELTVFPFLGEGSSNITSLSLVHNKIMEVSMYLLQPYVSLESLDLTSNSISE
LTVGSFPSIQLKYLNLTNNKISVLEPGCFENISSSLLVLRLNRNRIAVLPSKVFRLPQLQ
VLEMKRNRIKFVDSLTFKGMDSLRSLKMQRNGISKLMDGAFFGLTNIEELELEHNNLTEI
DKGWLYGLRMLRVLQISHNAVGVIRPDAWEFCQKLELLDLSSNHLTRLEETAFIGLGLLE
NLYLGENAISHLGEGVFSGLTNLRTLDIHNNEISWAIEDSIGLFDGMKKLSNLILQQNKI
KSITEKAFEGLKELEYLDLSKNDIMSLHPQAFSQLKLKGFVLNTSSLLCDCHMQWLGPWL
SESPFLQSVSAVCAHPADLFGRKVLSISPEEFVCEDFPKPQIKTHPETSVVLRGSNVTLR
CVASSSSDSPMTTAWRKDGEVLYDAEVQNYARYQEGELIYTTVLHLLNVNFTDEGRYQCV
VSNHFGSNYSNRAKLTVNEMPSFLKTPMDLTIRTGTMARLECAAEGHPSPQIAWQKDGGT
DFPAARERRMHVMPDDDIFFIANVKTEDMGVYSCTAQNAAGSLSTNATLTVLETPSFVRP
LEDRTVARGETAVLQCIAGGSPTPRLNWTKDDGPLVLTERHFFAAANQLLIIVDAGPADA
GKYTCIMSNTLGTERGHIYLSVLPSANCETGAGYDPDGWTTVGIVVIVVVCCVVGTSLVW
VIVIYHMRRKTEDYSITNTDEMNLPADIPSYLSSQGTLSEHQEGYSSSEAGSHQQLMPPL
SNGYIHKGTDGVCYGDMSSEVETEGNGVLHCRVGSLFSGRSSFHPGEAHEGLAGIPAGGP
GSLVICSDCYDNANIYTRTREYCPYAYVGEDDPLGRATPGLKESLNEHAQQEDATLEGLI
SNHDSSVFLGPNDKVLGGHTPSHHYINDYLCRSFWTEEELPSTKLQPGESSLSVTVHRTH
SVTSAADCTAEQTEATASHFPSPCTQDHRSASNRTNSDRHQTQT
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggttggcccattcctcgagcttttgtcgtcatgatgctctgtgtgggtgcc
tgggctggatattcttcctgtcctgctccgtgttcttgttcgaaaagacaagatgatcta
gagattgtggattgcaacaggaaaaagctgttggtccctccgcaagacctcccagaaaga
acaactcatgtcaccatgaatcataacgagctgactgttttcccctttcttggagaaggg
tcttccaacataacctcactgtcattagtccacaataaaatcatggaggtgtcgatgtat
ctgctgcaaccatatgtctcccttgagtcactggacctgacctccaactccatatctgaa
ctcacagtcgggtctttcccatccatccagctgaaatatctaaatctaacaaacaacaag
attagtgtccttgagcctggctgctttgaaaacatctccagctccctgctagtgctgagg
ctgaacagaaaccgaatagctgtgcttccctccaaagtgttcagacttccacagcttcaa
gttcttgaaatgaaacgcaacaggatcaagtttgtggacagcctcacatttaagggaatg
gactcactgaggtcactgaaaatgcagagaaatggtatctcaaagctaatggacggggct
ttttttggtctgaccaacattgaagaattggagttggagcacaacaacctgactgagatt
gacaaaggttggctttacggtctccgcatgcttcgtgtcttgcaaatcagccacaatgct
gtaggagttatccgaccagatgcctgggaattctgccagaagctggagctactagatttg
tcttccaatcacctgactagactggaggaaacagctttcataggattgggtctcctggag
aacctgtacctgggagaaaatgccatcagtcatttgggagaaggggtgttcagtggtctg
acaaatctacgtactttagatatccacaacaatgagatttcctgggccattgaagactcc
attggtctatttgatggaatgaagaagctaagcaatctaattttacaacaaaacaaaatc
aaatccatcacagagaaagcttttgaaggcctgaaggagctggagtatctggacctgagc
aaaaacgacataatgtccttacaccctcaagccttctcccaactgaagcttaaaggattt
gtcctgaacacaagcagcctgctgtgtgactgtcacatgcagtggcttgggccatggttg
tcagagagcccgtttctacagagtgtttccgctgtctgtgcccatcctgcagatctgttt
ggtcgcaaagttctgtccatcagcccggaggagttcgtttgtgaggattttccaaaacct
caaatcaaaactcaccctgaaacatctgtggttttgcgtgggagcaatgtgacgctgagg
tgcgtcgcatccagcagcagcgactcaccaatgaccactgcatggaggaaggacggggag
gtgctgtatgatgcagaagtgcagaattatgctcgttatcaggaaggagagctcatctac
accaccgtccttcacctcctcaatgtcaactttactgacgagggccgttaccagtgtgtg
gtttccaaccactttggctccaactattccaacagggcaaagcttacagtcaatgagatg
ccctcgtttcttaagactcccatggatcttacgatccgcaccgggacgatggccaggctg
gagtgcgcagcagaaggtcatccgtcaccgcagattgcttggcagaaggatggaggcacg
gatttccctgcagctcgggagcgccgcatgcacgtgatgccagatgatgacatcttcttt
attgctaatgttaaaaccgaagacatgggagtctacagctgcaccgcccaaaatgcagcc
ggcagcctttcgacgaacgctacgcttactgtcttggaaactccttcctttgttcggcca
ctggaagacaggacggtggcccgcggcgaaaccgccgtacttcagtgtatagccggggga
agcccaacgccacgcctcaactggaccaaagacgacggccctctggtgctcactgagcga
cacttctttgctgctgccaatcagcttctgattatagttgacgccggtccagctgatgcg
gggaaatacacatgcatcatgtctaacacgctgggaaccgagcgcggccacatctacctg
agtgtcttaccgtcagcaaactgtgaaactggagcaggttatgacccggacggctggacc
accgtgggcatcgtggtgattgtggtggtgtgctgtgttgttggaacttctctggtctgg
gtcatagtcatttatcacatgcgcaggaagactgaggactacagcatcaccaacaccgat
gagatgaatttgccagcagatattcccagttatctgtcctctcagggaaccttgtcagag
catcaggagggttacagtagctctgaggcaggaagccaccagcagctcatgccccccctc
tctaatggctacattcataaaggcactgatggtgtgtgttatggcgacatgagcagtgag
gtggaaactgaaggaaacggcgtgctgcactgcagggtgggatctctgttctcaggccgc
agcagcttccatcctggggaggctcatgagggtctagctggaatccccgcaggcggtcca
ggttccttggtcatctgctccgactgctacgacaatgccaacatttacactcgtacacgg
gagtactgcccttatgcttatgtgggggaggatgatcctctgggcagggctacaccgggc
ttaaaagaaagcctcaatgagcatgcccagcaggaagacgccacgctggagggcctcatc
agcaaccacgactcctcagtctttcttggcccaaatgacaaagtgctgggcggtcacact
ccatcgcaccactacattaatgattacctttgtagatctttctggacagaagaagaactt
ccatcgacaaaactccaacccggggagtcttctctctctgtgactgttcacaggacacat
tctgtgacttctgctgccgactgtacagcggaacagactgaagccacggctagccatttc
ccaagtccttgcacccaggaccacagaagtgcctcaaacaggactaactctgacaggcat
cagactcaaacatag
DBGET
integrated database retrieval system
