Oryzias latipes (Japanese medaka): 101169284
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Entry
101169284 CDS
T02443
Symbol
shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ola
Oryzias latipes (Japanese medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
Ank_3
PDZ_6
Ank_5
SH3_2
PDZ
SH3_9
FERM_f0
2C_adapt
Motif
Other DBs
NCBI-GeneID:
101169284
NCBI-ProteinID:
XP_023811686
LinkDB
All DBs
Position
6:complement(20287079..20486238)
Genome browser
AA seq
2022 aa
AA seq
DB search
MPLRPAAGKHEPASSARQDQQPRTHAHTLTSPHTHAANGSQWGSTDSGSSREEEDSGVLA
FRPGAERGSSARAPMEEPTGNTVVIRIGIPDLQQTKCLKFNVDAPIWLSKQQILCTLNQS
LKDVLNYGLFQPAYNGKAGKFLDEERQLREYPFPSIAPVPYLEFRYKRRVYTQTYLDEKQ
LSKLHTKANLKKFMEYVQQRNIEKVSRFLDKGLDPNFHDPDTGECPLTLSAQLEGCADLI
KVLKNGGAHLDFRTKDGITALHKAVRSKNHTALITLLDLGASPDYKDSRGLTPLYHCSMV
GGDPYCCELLLHDHAQVGCVDENGWQEIHQACRYGHVQHLEHLLFYGAVMSAQNASGNTA
LHVCALYNQESCARVLLFRGANKEIKNYNSQTAFQVAIIAGNFDLAEIIKVHKASDVVPF
RETPSYTNRRRLTTGPLPSPRSLLRSASDNNLNGDHDHIHSQPPRESRGRQGPSPVPSLR
SLPAFGQQHSSLGEERYVKKSRHGEIPDSSLQSTGSSRSSHSRSPSLRHMHEDDKPIPRR
SQSHGYPHGYSPRGRLSPGSVHRDPSPPHHTPPALTGTRGPKRKLYSAVPGRTFIVVKPY
TPQGEGEIQLNRGERVKDFDCNDVEAFPEEQLYDEIKIVTDNFMIANADTPCNEDAEDYS
DIDDEYGKVLSIGEGGFWEGSVKGRTGWFPADCVEEVQMRQYDPRLESREDRNKRLFRHY
TVGSYDNFTSYSDYIIEEKNAVLHKKENEGFGFVLRGAKAETPIEEFTPTPAFPALQYLE
SVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGSRLLMKVVSVTRKPESE
EAVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRKRGERLDEMLASQESMMRSQPS
EADYRAATVKQRPTSRRITPAEISSLFERQGMTFHGALHPGIERGHIPLPKGMSRTKSFG
ATEEDRLSALAGEHRFPRSSSMTDSLRDHSQGHPIPPPPQTAPPPPPYYLDTGPPPPFCP
PPPPSRTQSQSHEPGGRSSFKPSSLDLPYEAAQRQATHIERQKKACSMIILQDSSHQPVE
PTEIPRPCAATPPERIKRKGRIIDNPYANVGQFSIGLYTPTKPQRKKSPLVKQLQVEDAQ
EKASLALAAAHSRESSPSGRHPHTHGHTNTSRADYYQQQLMIERERLRAQGEMIFQGKGP
FAAAIAGAVKDRERRLEERRKSTVFLSVGTLEGSSTSPDSPSLTQSHSIDERILTRELGQ
LPPPALALSPSPSGTTFIHPLTGKPLDPNSPLALALAARERALTSQSQSPTGSPEPRTKQ
DRVGQGVMFIDIQTKESPRGDGATSSPPFSPKSSKAAGYEVGSSLASVLAPQPTKPQLAP
SPSPISFRQEMEARVEERREEKRLEDKKSMLISIMDTSQQKTAGLIMVHATNNGQAAGMG
SELEQIPVLASMEPSKTPSPQAKPLSPTVPQSQVLPQTQHPATPCQEKSLAQGSSEEDAD
TYTVTLPPAVLSSSDEETREELRKIGVVPPPDEFANGLLAQAHPTPASPAKASTSPGTPT
TPTPQTPSTLLTPIVTPTQPQPQQPSRLHSAAAVSGKPSDPLEPPPVGESGSAADSGVEE
ADTRSSSDRERDHHLETTSTVSTVSSMSTLSSESGEPADTHTTHTSYADGQTFVFDKPPV
PPKPRLKSQIGGSKGPVTFRDPLLKQSSDSELLSQQQAAALAAAAAGGAGLPAGGSASVT
GLGPTKPRYLFQRRSKLWGDPVEPRGPGVGLSIGSLGNLGGLGLGLGADEGTKPSVIGEL
SSRLQQLNKDTRSLGEEPLGTSLDPGRKSPVTGARLFSSLGELHTISQRSYGTTFTIRPG
SRYPVTRRTPSPSSGSPDRGDPLGRFSGYGLPTSPTTPPQTILKSSSLSLPQEPKEVRFV
MRSSSARSRSRSPSPSHSPGLGSPLLALRPFHQKPLHLWNKYDVGDWLESINLGEHRAGF
QEHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALKQLLES
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccagccagctctgcgcggcaggaccag
cagccgcgcacacacgcacacacactcacgagcccgcacacgcacgcagccaacggcagc
cagtggggcagcaccgacagcggcagctcccgggaagaggaggacagcggcgttctggct
ttccgtcccggtgcagagcgaggctccagcgcgcgggcacccatggaggagccgacgggc
aacacggtggtcatccgcatcggaatcccagacctgcaacagacgaaatgcttgaaattc
aatgtggatgctccaatttggctgtccaagcagcaaatcctgtgtactctcaaccagagc
ctgaaggatgtactcaactatggcctgttccagccagcttacaacggcaaggccgggaaa
tttctggatgaagaacgacagctaagggaatacccgttcccatccatcgctcctgtacct
tacctcgagttccgctataaaagacgtgtctacacacagacctaccttgatgaaaagcag
ttgtccaagctccacaccaaggcaaacctgaaaaagtttatggaatatgtgcagcagagg
aacattgaaaaagtctcaaggttcctggataaaggcctggatccaaacttccatgatcca
gacacaggagagtgtccactaacgctatcagctcagctggagggatgtgcagacctcatc
aaagtgctaaaaaatggaggggcacatctggacttcagaacaaaggatgggatcacagcc
ctgcacaaggccgtgcgcagcaagaaccacacagctcttattaccctcctggatttgggt
gcatcacctgattataaagacagcagggggctgactcctctctaccactgctctatggtc
ggaggagacccttattgctgtgaactgttactgcacgatcacgcacaagtcggctgtgtg
gacgagaacggctggcaggagattcatcaggcgtgtcgatatggccatgtgcagcacttg
gagcacctgctgttctatggagctgtcatgagtgcccagaatgcatctggaaacaccgcc
ctacacgtgtgtgctctctacaaccaggaaagctgtgcacgtgttcttctgttccgcgga
gccaataaagagatcaagaactacaacagccaaactgcttttcaagtggctattatcgct
ggaaactttgatctggcagaaatcatcaaggtgcacaaagcatcagatgttgtgcctttc
agggagaccccctcctacaccaaccgtcgacgtttgacaaccggccccctgccctcacca
cggtctttgcttcgctctgcgagtgacaacaacctgaacggtgaccacgatcacattcac
agtcagccccccagagagagccgtggtcgccagggcccgtctcctgtcccctcgctgcgc
agcctcccagcctttgggcaacagcacagcagccttggagaagaaagatatgttaaaaag
agtcgtcacggtgagatccccgacagcagtcttcagagtactggcagctccagatcttcc
cattcccgttctccttcactacgtcacatgcatgaagacgacaaaccaattcccagacgg
tcccaaagccacggctaccctcatggatacagccctcgcggaagactcagccccggctca
gtgcatcgagacccaagcccaccccatcacactcctccagctctaacgggaacgcgtggg
cccaaaaggaaactctacagtgccgtcccaggacgtactttcattgtagtcaagccttat
acgccacaaggggagggggagatccagcttaaccgtggggagcgagtcaaagactttgac
tgtaatgacgtagaagcttttccagaggagcaactctacgatgagatcaaaatagtcaca
gacaacttcatgatcgcaaatgctgacacaccatgcaatgaagatgcagaagattactct
gacattgatgatgaatatggtaaagtgctgagcataggtgaaggaggtttctgggaaggc
tcagtgaaagggaggacaggctggttcccagcagactgtgtggaggaagttcagatgagg
cagtatgacccacggctagagagtcgggaggatcgcaacaaaagactgttcagacactac
actgtgggatcttacgacaacttcacctcatacagtgactacatcatagaggagaagaac
gctgttttacacaagaaagaaaatgagggttttggttttgtccttcggggagccaaagct
gagactcccattgaagagttcacgcccaccccagcgttcccggccctacagtatctggag
tcagtggacgtggagggagtggcctggagggctggtctcagaacgggggacttcttgatt
gaggtaaatggggtgaatgtggtgaaggtgggccataagcaggtagtttctttgatccgg
caaggaggcagcagactgctgatgaaggttgtttctgtcacacgcaaaccagaatctgaa
gaagctgttcgaaaaaaagctcccccaccaccaaaaagagctcccagcacaaccctgact
ctgcgctccaagtccatgaccgctgagcttgaagaactggcttctgctcggcggaaaagg
ggagaaagactagatgagatgttggcatcgcaagaatctatgatgcgttcacagccctcc
gaggcagattacagagcagctactgtcaaacaacggcctaccagcaggagaatcacacca
gcagagatcagttcactctttgagagacaagggatgactttccatggagctcttcaccca
gggattgagagaggtcacataccactaccaaagggaatgtccaggaccaagtcttttggt
gcaactgaggaggatcgactatctgcccttgcaggcgagcacagatttccccgtagttcc
tcaatgacagacagcctccgggaccactcacagggccatccaatccctccacctccccaa
acggcgcctccccctcctccctactacctagacacgggtcctcctccacctttctgccct
cctcctcccccatctaggacccagagtcagagccatgagcccggaggacgttctagcttt
aagccgtcctccttggacttgccttatgaggccgctcagcggcaggccactcacattgag
agacagaaaaaagcttgctcaatgattatcctgcaggattcttcccatcaacctgtagag
ccgacagaaatccctcgtccctgtgctgctacgccacctgagcggataaaaagaaagggt
cggattattgacaacccttacgcaaatgtgggtcagtttagcattggattgtacacgccc
accaaaccacaaagaaaaaagagtcctctggtaaaacaactgcaggtagaagatgcacaa
gaaaaagctagtttagccttagctgctgcccactcacgagagagctcaccctcaggaaga
cacccacatacccacgggcacactaacaccagccgtgcagattactaccagcagcagctg
atgattgagcgggagcgtttgcgggcccaaggagagatgatttttcagggtaagggcccc
tttgctgcagcaattgctggagctgtgaaagatcgtgagcggcgtctagaagaaagaagg
aaatccactgtcttcctatctgtcgggaccctggagggctcatcaacaagccctgattcc
ccttctttgactcagtctcattctatagatgaaagaatactgactcgagagctgggacag
cttcctccccctgccttggctcttagcccctctcctagtgggaccacctttatccatcca
cttacaggaaagcctcttgacccaaattctccactggctcttgcgctggctgcaagagaa
agggcactaacctcccagagccagtctccaactggcagcccagaacctcggactaaacag
gaccgagtcggtcagggagtaatgtttattgacattcagaccaaagagtctcctcgaggt
gatggtgcaactagttctcctccattttcacctaaaagcagcaaggcagctggatatgaa
gttggatcttcccttgcatctgttttagctcctcagcccaccaagcctcagttggcacca
tcaccatcgcctatatcattccgtcaagagatggaagcaagagtagaggaaaggagagaa
gaaaagagactagaggataaaaagagcatgttgattagcattatggacacatcacaacag
aagacagcaggactgatcatggtacatgccaccaataatggtcaagctgctggaatgggt
tcagaacttgaacagataccagtgcttgcttcgatggagcccagcaaaacaccaagtccg
caggctaaacctcttagtcccactgtaccccagtcccaggtcttacctcaaactcagcat
cctgccaccccttgccaagagaagagtttggctcagggaagttcagaggaggatgcggac
acatacacagtcactttgccccctgctgttttatcctccagcgatgaggaaacaagagaa
gagctacgaaagatcggagtagttcctcctccagacgagtttgcaaatgggttgctggca
caggcacatccaacgccagcatcccctgctaaggcttccacctctcctggaaccccaaca
acaccaacaccccaaactccctcaaccctgttaacccctattgtgactcccacccagcct
cagcctcagcagccctcacgtctacacagtgctgcagctgtctcagggaaaccatctgac
cctctggagcccccaccagtgggtgagtctggctctgcggctgactcaggcgtggaggag
gctgacacacgtagctcaagtgaccgagaaagagatcatcatcttgagaccaccagcact
gtctccacggtttccagcatgtccacactgtcgtcagaaagcggtgagcctgctgacaca
cacaccacgcacacctcctatgccgacgggcagacatttgttttcgacaagccaccagtg
cctcctaagccccgactcaagtcccagataggagggagtaaaggccccgtcaccttcagg
gaccctctactgaagcagagctccgacagtgagctgctatcccaacaacaggctgctgcc
ctggctgctgctgcagctggaggagctgggctccctgcaggaggttctgcctctgtgact
ggtctaggccccaccaagcctcgctacctcttccaaaggaggtccaagctgtggggggac
ccagtggagcctcgaggcccaggggtggggctaagcattggaagtttgggcaatcttggt
ggactgggacttgggctgggtgcagatgaaggtacaaaaccttctgtaataggggagcta
agttcacgtctacagcagttaaataaagacactaggtcactgggtgaggagccactggga
acatcacttgacccagggaggaagtcacctgtaacaggggccagacttttcagcagctta
ggtgaactccacaccatttctcagagaagctatggaaccacattcaccatccgccctggt
agccgctaccccgtcacgcgacgtacccccagcccaagctcgggctcacctgaccggggt
gatccccttggacgattttcaggctatggccttccaacatcaccaacgacaccaccacaa
accatcctcaagtcctccagcctcagcttaccacaggagcccaaagaggtgcgatttgtc
atgaggagctcaagcgctcggtcgcgctctcgctccccatccccgtcccattccccgggg
ttaggctcgccccttttagcacttcgacccttccaccagaaacccctccacctttggaac
aagtatgacgtcggagactggctggagagcatcaatctaggggagcacagagcagggttt
caggaacacgagattgaaggctctcacctcccagctttgaccaaggatgactttgcagag
ttgggagtaacacgagttggacaccgcatgaacatcgaacgagcactaaagcagctgctg
gaaagctga
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integrated database retrieval system
