Oryzias latipes (Japanese medaka): 101169329
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Entry
101169329 CDS
T02443
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101169329
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101169329
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
101169329
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C2: calpain family
101169329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
101169329
NCBI-ProteinID:
XP_004083493
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All DBs
Position
24:6420191..6432190
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AA seq
763 aa
AA seq
DB search
MGDKKNMEKVPLVEETKVKVLHETEATLDVDGVTDYSLTGANSIYSAILSRNEAVKDAKR
LKTFLELRDKYVKKKVLFEDPLFPANDSSLFYSHKPSMKIEWKRPTEICENPQFIIDGAN
RTDICQGELGDCWLLAAIACLTLSEKLLYRVIPPEQSFTENYAGIFHFQFWRYGEWIDIV
VDDRIPTCNNLLVFTKSFRENEFWSALLEKAYAKLHGSYEALKGGNTLDAMEDFTGGVTE
LFELSEAPKGLFIIMKKALERGSLMGCSIDVTTANDIESRTNQGLVRGHAYSIIALEECD
QVSEDGKIRLIRLRNPWGWVLWKGPWSVNSKEWSTVSTADRDNLKKQTLEMSEFWMSFDD
FKKNFTKLEMCNLTPDALTGDERQSWTVSINEGRWVRGSSAGGCRNFPDTFWTNPQYRLR
LYEEDDPEEEQVLCTVVVALMQKGRRMQRHAGAKFLTIGFSIYEVPKELQGQNQHLQKDF
FLYNASKAKCKAYINLREVTERFRLPPGEYVILPTTFKAHEEGEFLLRVFSENKSTSEEA
ETSIDKIEKGKPIVFVSDRARTNKEIEHEGIRGEKKKKPKRKPLQAVEETEEEKQFRVIY
QKIAGEDMEICASELMAIMKNVLSKHSEIKSDGFSLETCRSMIALMDTDGSGKLNLQEFK
HLWKKIKEWQLIFKRYDKDGKCSISSFEMRNAVNDAGFNLNKQLYDIIAMRYADKHLNID
FDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagaaaaacatggagaaggttcctctagtagaagaaacaaaggtgaaggtg
cttcatgaaactgaggccaccctcgatgttgatggcgtaactgattacagcctcactgga
gcaaactccatctactcagcaattctcagcagaaacgaggccgtcaaagatgccaagcgt
ttgaagacgtttttggaactgcgagataaatatgtgaagaagaaggttttgtttgaggat
cctctgttccctgcaaatgactcgagtcttttctacagtcacaaaccttcgatgaagatt
gagtggaaacgtcccacagaaatctgtgaaaaccctcagttcatcatagatggagccaac
cgaactgacatctgccaaggagaactgggtgactgttggctgcttgctgccatcgcctgt
ctcaccctgagtgaaaagctgctgtacagagtcattccaccagagcaaagtttcacagaa
aactatgctggcatctttcacttccagttctggcgttatggtgaatggattgatatagtt
gtggacgaccggatccccacctgcaacaacctgctagttttcaccaagtcattcagagag
aatgagttctggagtgcccttttggagaaagcttatgccaagctgcatgggtcttatgaa
gcactgaaaggggggaacacgttggacgccatggaggatttcacaggaggagtcaccgag
ctctttgagttgtccgaggcgcccaaaggcctgttcatcatcatgaagaaagcactggag
aggggctcactgatgggctgctccattgatgtcacaacagccaatgacatcgagagccgg
acaaatcaagggcttgtcagaggtcacgcctactccatcatagccctggaagagtgtgac
caggtttcagaggacggcaaaattcgcctgattcgtttgcgcaatccctggggttgggtc
ctctggaagggaccctggagtgtgaattcaaaggagtggtcgaccgtctccactgcagac
agggataatctgaaaaaacagacgttggagatgagtgagttctggatgtcttttgacgat
ttcaagaaaaatttcactaaacttgagatgtgcaacttaacccctgatgctctcacgggg
gacgagagacaaagctggacggtgtcaatcaacgagggtcgctgggtgaggggcagctct
gctggtggctgcagaaattttccagacacattttggaccaaccctcaataccggctgcgg
ctgtacgaagaggacgaccccgaggaagagcaggtactctgcacagttgtggtggctctg
atgcagaaaggtcggaggatgcagcgccatgctggagccaaattcctcaccattggattt
tccatttatgaggtgccaaaagagttgcaggggcagaatcagcatctgcagaaggacttt
ttcctctacaatgcctccaaagcaaagtgcaaggcctacattaacctgcgggaggtaaca
gagcgtttccgtctccctccgggggagtacgtcatcctgcctacaacctttaaagctcat
gaagaaggagagttcctcctgcgggttttctctgagaacaaaagcacatcagaggaggca
gagaccagcattgacaaaattgagaaaggaaagccaatcgtgtttgtgtccgacagagca
cgcaccaataaagaaattgagcacgagggcattcggggagaaaagaaaaagaaaccaaag
cgtaaaccgctacaagccgtggaagagactgaggaggaaaagcagttcagagtcatttac
caaaagattgctggtgaggacatggagatctgcgccagcgagctgatggcgatcatgaag
aacgtactctccaagcatagcgaaataaagtcagacggctttagtcttgagacatgccgc
agtatgattgctttgatggatactgatgggtctggaaagttgaacctgcaggagttcaaa
catttgtggaaaaagatcaaggagtggcagctcatctttaagcgctacgataaagatgga
aagtgctccatcagcagttttgagatgaggaatgctgtaaatgacgcagggtttaatctc
aacaaacagttatatgacatcatcgccatgcgctatgcagacaagcacctcaacatcgac
tttgacagttacatctgctgtttcgtaagactggagggcatgttcagagcgttcaatgcg
tttgataaagatggagatggaataatcaaactcaacgtgctcgagtggcttcagctgacc
atgtactcttaa
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