Oryzias latipes (Japanese medaka): 101169417
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Entry
101169417 CDS
T02443
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101169417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101169417
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
101169417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_CCN
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
101169417
NCBI-ProteinID:
XP_020562639
LinkDB
All DBs
Position
1:complement(12683439..12690915)
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AA seq
637 aa
AA seq
DB search
MAGLWELLCSLQQGRFGALIHLLCLFCLVSGALPWDIKRSSYPLQGFEVVRGNFSRDFLH
VGYNKIAEIPAGACNISVQETKKSRNYLALQTRSGISIINGNWVIDRPGTYFALGTQLIY
KRPNEIHSWNGESITAPGPLTDDLHLYLIYQQPGPSVHYEYSIPIIIHSSPEPDTPDIMP
PDDTEAQLDGDERVNTEATVNSITVKDKTHSKKDSFDTSINFVSQSTYVWTKTGHTGCST
TCGTGTRAVFWECVDSDSQMTVPADFCDLSNEPTNQEDCNEYPCPPYWDIGEWSECSRKC
GPGSQMRQVICCQVTRVHDNGTETSVAVAPEQCGTSERPMTQSTCQLKICSHWELRSDWS
PCSVPCGVGQRSREVVCVSNQGVVEDEQECNMSLKPDFLQNCDMGVCARSWFTSLWSQRC
SAECGRGNKTRSVVCLSNRGGSDLPLDGCEGDRPPAVTSCDAGPCQNQLEWYTGPWSQCS
AECGNGTQTRSALCIFTNNGLQEVVDQFKCSGLSKPITSQPCRLKPCGVQWYVTEWSACS
RSCNSGYRVREVRCLTDDIVPSDDCHPISIPESREECNKQPCLTETNPLCSDQFHNCVLV
VQARLCVYPYYTRVCCTSCSRTQRTYPVSIQRNRIRR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggctggactgtgggagctgctctgctctctgcagcagggtcgttttggggctctcatc
catctcctctgccttttctgcctagtttcaggtgctcttccctgggatatcaaaaggagc
tcataccctttgcagggctttgaggtagtgagaggaaatttctctcgggactttcttcac
gttggctacaataagattgcagagattcctgcaggagcatgcaacatcagcgtccaggag
acaaaaaagagtcgaaattatttggccctgcagacccggagcggcatctccatcataaac
ggaaactgggtgattgacagacctggcacttactttgctcttggaacgcagctgatctat
aaacggccaaatgagatccattcctggaatggagaatccatcactgcaccaggacccttg
actgatgacctgcatctttatttaatttaccaacaaccaggtccaagtgttcattatgaa
tacagcatacctataattattcactcttctccagaaccagacacacctgacataatgcct
ccagatgacactgaagcgcaattggatggagatgagagagtcaacacagaggccaccgtt
aacagcatcactgtcaaggataaaacccattccaaaaaggattcctttgacaccagcatc
aactttgtatctcagtccacttatgtttggacaaagactggacacacaggatgcagcaca
acctgtggtactgggacgcgtgctgtattttgggagtgtgtcgacagtgactcccagatg
actgttccagctgacttttgtgacctttccaatgaaccaacaaaccaggaggactgcaac
gaatatccctgtcctccctactgggacattggggagtggtcagaatgcagcaggaagtgt
gggcctggcagtcagatgcgtcaggtgatctgctgccaggtgacccgagttcatgacaat
gggacagagacttctgttgctgtggcgccagagcagtgcggcacgtctgaaaggccgatg
acacaatccacatgccagctgaagatctgcagtcattgggagctccggtctgactggagc
ccttgctcagtgccatgtggagtgggccagcgcagcagggaagtggtgtgtgtgagcaat
cagggggttgtggaggatgagcaggagtgcaacatgagcctaaagccagactttctacaa
aactgtgatatgggagtctgtgcaagaagctggttcacctctctctggagccagcggtgt
tctgcagagtgtggtcgagggaataaaaccagatcggtcgtatgtctcagcaatcgtggt
gggagtgatctcccactggatggctgtgaaggggaccgcccaccagctgtgacatcatgc
gatgctggcccctgtcaaaatcagcttgagtggtacacaggaccttggagccagtgttct
gcagaatgtggaaacggcacacagacccgcagtgcactttgcattttcaccaacaacggt
ctacaagaggttgtggatcagttcaaatgttccggtctgtctaagccaatcacatcgcag
ccctgcagactgaaaccttgtggggtccagtggtacgtcacagaatggagtgcgtgctct
cgctcctgtaacagcggctaccgggtgcgtgaggtccgctgtctcactgacgacattgtt
ccaagtgacgactgtcaccccatttcaattcctgagagtcgtgaggaatgcaacaaacaa
ccatgtctaactgaaacgaatccactttgcagtgaccagttccataactgcgtgttagtg
gttcaggcccgcctctgcgtttacccttactacacaagagtttgctgcacttcctgctct
cgtactcagaggacgtaccccgtgtcaattcaaaggaaccgcattcgtcggtga
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