Oryzias latipes (Japanese medaka): 101169420
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Entry
101169420 CDS
T02443
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101169420 (khsrp)
03041 Spliceosome [BR:
ola03041
]
101169420 (khsrp)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101169420 (khsrp)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101169420 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
101169420
NCBI-ProteinID:
XP_023815427
LinkDB
All DBs
Position
1:complement(28686795..28695630)
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AA seq
641 aa
AA seq
DB search
MSDYSGLPSNGVGAGMKKDAFADAVQRARQIAAKIGGDGTSSSTNNGGAESYPFTAQKRS
LEEADEPDAKKVASQSERDSAMSIGAQLAALSQQSVRSSTMMEECKVPDSMVGLIIGRGG
EQINKIQHESGCKVQIAHDSAGLPERSISLTGSLDAIQRARALIDEIVSRGHEPSNGQQG
SMQEMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNVDKPLRIIGDPYKVQ
QAKEMVNEILRERDHAGFGDRSEYGSRMGGGGIEIPVPRQSVGVVIGRNGEMIKKIQNDA
GVKIQFKPDDGTAPEKIAHIMGPPDQCQHAVSIINDLLQSIRARDEGGQGGMSPGGRGWG
RGQGSWGPPGGEMTFSIPAHKCGIVIGRGGENIKSISQQTGAFVEVCRQPNGDPNFKLFT
IRGSPQEIDHAKQLIEEKIEAPLCPVGGSPGPGGPGGPGGPMGPYIPNPYNAGPPGGAPH
GGTPGGAQYCAQGWGDAYQQWQAPNPHDPSKAAAAAADPNAAWAAYYAQYYGQPQGGAMA
AQNSGIPAAAAPGDQSQPGQTSGGQPDYTKAWEEYYKKMAMAQPGGGAAAAGSTAAAAVA
GGQQDYSAAWAEYYRQQAAYYGQTGQAPGQGGGPQPGQQPQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactacagcggtctgccgtcgaacggagtcggcgctgggatgaagaaggacgcc
ttcgctgatgcggtgcagcgagcccgacagattgcagcaaaaattggtggagacggcacc
agctcctctacaaacaacgggggtgcagaaagttatccgttcacagcacagaagcggtcg
ctggaggaggcagatgaacctgatgctaagaaggtagcatcacagagtgaacgagactct
gcaatgtctatcggagcccagctggctgcgctgtcccagcaaagcgtccgctcgtccacc
atgatggaggagtgtaaggttcccgacagcatggtcggtctcatcatcggcagaggaggc
gaacagatcaacaaaatacaacacgagtctggctgcaaagtccaaatcgctcatgacagt
gctggacttcctgaaaggagcatttctctgacaggcagcctggatgctattcagagagcc
agggcccttatcgatgagattgtgtccaggggtcacgagccgagcaacggtcaacaaggt
tccatgcaggagatgatcatcccagcaggcaaggctggcctgatcattgggaaaggagga
gaaaccatcaagcagctgcaggagcgggctggagttaaaatgatcctcatccaggatgga
tcccagccccccaacgtagacaaacctctgcgcatcattggagacccctacaaagtgcag
caagcaaaggagatggtcaacgagatcctgagggagcgcgaccacgcggggtttggagac
aggagcgaatacgggtccaggatgggagggggcggcattgaaatccccgtgcctcgacag
tccgtcggggttgtcatcggtcggaacggggagatgatcaagaagatccagaacgatgct
ggagtgaagattcagtttaaaccggatgacggcacggcgccagagaagatagctcacatc
atgggccccccagaccagtgtcagcatgccgtctccatcatcaatgacctgctgcagagc
atccgagcccgggacgagggcgggcagggggggatgtcgcccggtggtcgagggtgggga
cgaggccagggcagctggggtcctccgggcggggagatgaccttctccattcctgctcac
aaatgcgggatcgtcatcgggagggggggagaaaacatcaaatccatcagccagcagacg
ggggcctttgtggaggtttgccgtcagcccaacggggatccgaacttcaagctgttcacc
atcaggggctccccccaggagatcgaccacgccaagcagctaatagaggagaagattgag
gctcctttgtgtccggttggtggcagtcctggccctgggggccctgggggtcctggcggt
cccatgggtccctatattcctaacccttataatgcagggccccctggtggagcaccgcat
ggtgggacgcctgggggagcgcagtactgtgctcagggctggggggatgcatatcaacag
tggcaggccccaaaccctcatgaccccagtaaagcagcagcagcagcagcagacccgaat
gcagcatgggcagcctactatgcacagtactatggccaaccacaggggggcgccatggca
gcccagaattcaggcatccctgctgcagcagcaccgggggaccagagccagccggggcag
acctcgggggggcagccagactacaccaaggcctgggaggagtactacaagaagatggca
atggcccagccgggtggaggtgcagctgctgcaggcagcaccgctgcggcggcggtggct
gggggccagcaggactacagtgcagcctgggctgaatactacagacagcaggctgcttat
tacggtcagacgggacaggctcctggacagggaggtggtccacagccgggacagcagccg
cagtaa
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integrated database retrieval system
