Oryzias latipes (Japanese medaka): 101169438
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Entry
101169438 CDS
T02443
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04810
Regulation of actin cytoskeleton
ola05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101169438
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101169438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101169438
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101169438
Factors involved in mRNA localization
Other mRNA localization factors
101169438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
101169438
NCBI-ProteinID:
XP_004068358
UniProt:
H2MMS2
LinkDB
All DBs
Position
4:complement(28124788..28159532)
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVVYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNDMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGRFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMAEPASIQESQNLSMFLANHNKITQSLQQQLEVIHGYEELLAD
IVNLCADYYENKLYLTPSEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSVSSSPQYNICEQMIQIRDDHMRFI
SELARYSNSEVVTGSGRQEAQKTDTEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DRYSNKEFPDSAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YTALQDFAQITLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTMRSSLEGPTILDIERFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILDTKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRTDCKNQGTNIPWPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSSALYKSL
ELAINRFESEDLSSIVELEGLLEVNRMTHKLLSKFLTLDSYNAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTELTFSQEIQREKPSNAQPQYLYGSKTLNMAYSS
IFSSYRNFLGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIIEYAELKTVCFQNLREVGNAILFCLLCEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLEAKMKRLETKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPTNGVMHVDDCVEFHRLWSAMQFVYCI
PVGANEFTVERCFGDGLHWAGCMIITLLSQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKFQVINNEIFGILSKYMKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctactgtgacgttagaagatgctctctccaatgtggacctcctggaggagctg
cctctcccggaccagcagccgtgcatcgagcccctgccctcctcggtggtctatcagccc
aacttcaacaccaactttgaggaccgaaatgcattcgtcaccggcatcgccagatacatc
gagcaggctacggtccactccagcatgaacgacatgctggaggaggggcaggagtacgcc
gtcatgctctacacctggaggagctgctctcgtgcaatcccacaggtgaagtgcaatgag
cagccaaacagagtggagatctatgagaagactgtggaggtcctggagcccgaggtcacc
aagctgatgaacttcatgtacttccagcgcacggcgatcgatcgtttctgcggggaggtc
cgccgcctgtgtcacgccgagcgcaggaaggactttgtttctgaggcctacctgctgacg
ctgggacgattcatcaacatgttcgctgtgctggacgagctgaagaacatgaagtgcagc
gtcaagaacgatcactctgcctacaaaagagccgctcagttcctcagaaagatggcggag
ccagcatccattcaggagtctcagaacctgtccatgttcctggcgaaccacaacaaaatc
actcagtcgttgcagcagcagctggaagtgattcacggctatgaagagctgctggcggac
atcgtgaacctttgtgccgattactacgagaacaagctttacctgacgcccagcgagaag
cacatgctgctcaaagtgatggggtttggattgtacctcatggatggaaacagcagcaac
atctacaagctggatgccaagaagagaattaacctcacaaagattgataagttttttaag
caactccaggtggtcccgctgtttggtgacatgcagattgagctgtcccgatacatcaag
accagtgctcactttgaggagaacaaatccaggtggacctgcacctccgtgtccagcagc
cctcagtacaacatctgtgagcagatgattcagatcagggatgatcacatgcgcttcatc
tctgagcttgcacgctacagcaacagtgaggtggtgactggatcaggccggcaggaggcc
caaaagacggatacggagtacaggaagctgtttgacctggccctgcagggcatgcagctg
ctctcccagtggagcgctcacgtcatggaagtgtactcctggaagctggttcatccaaca
gacagatactccaacaaggagttccccgacagcgcagaggagtacgagagggccacccgc
tacaactacacgagcgaggagaagtttgccttggtggaggtgatggccatgatcaaaggc
ctgcaggtgctgatgggacgcatggagagcgtgttcaaccacgccatccgtcacaccatc
tatacggcgctgcaggactttgctcaaattaccctgcgggatccgctgaggcaggccatt
aagaagaagaagaacgtcatccagagcgtcctccaggccatccggaagaccgtctgcgac
tgggaaactggtcgcgagcctcacaacgacccggccttgcggggtgaaaaggacccaaag
ggaggcttcgacatcaaggtccctcgccgggctgtgggcccctccagtacccagctgtac
atggtgaggaccatgctggagtctctcgtcgcggacaagagcggctccaagaagactatg
cgcagcagcctggaaggccccaccatcctggacatcgagaggttccaccgcgagtctttc
ttctacacgcatctgctgaacttcagtgagaccttgcagcagtgctgcgacctctcccag
ctttggttcagagagttcttcctagaactcacgatgggccgcaggattcagttccccatc
gaaatgtccatgccgtggatcctcaccgaccacatcctggacaccaaagaggcctccatg
atggagtatgttctgtatcctctggatctgtacaatgacagcgctcactacgccctgacc
aaattcaagaagcagttcctgtatgatgagatcgaggcggaggtcaacttgtgcttcgat
cagtttgtctacaagctggctgatcagatatttgcctattacaagatactggcaggaagt
ctcctgctagacaaacgtctgaggaccgactgtaagaaccagggcaccaacattccctgg
cccccctccaaccgctacgagactctgctgaagcagcgccacgttcagctcttgggacgt
tccatcgacctgaaccgtctcatcactcagagggtctcatctgcgctctacaaatccctg
gagctggccatcaatcgcttcgagagcgaggacctctcctccatcgtggagctggaaggt
cttctggaggtcaaccgcatgacacacaagctcctcagtaagttcctgactctggacagc
tacaacgccatgttccgtgaggccaaccacaacgtgtcggccccttacggcaggataacg
ctgcacgtcttctgggagctgaactacgacttcctgcccaactactgctacaacggttcc
accaacaggtttgtgcgcaccgagctgacgttctcgcaggaaatccagcgggagaagcct
tctaatgcccagcctcagtatctgtacgggtcaaagacactaaacatggcgtacagcagc
atattcagctcctacagaaacttcctgggacccccccacattaaggtcatgtgcagactg
ctgggctaccagggcatcgctgtggtgatggaggaactgctgaaggtggtcaaaagcctg
cttcaaggcaccatccttcagtatgtgaagaccttgatggaagtgatgccaaagatctgc
aggcttccgcggcatgagtacggctcccctggcatcctggagttctttcaccatcagctg
aaggacatcattgaatacgccgagctaaagaccgtgtgcttccagaatctgagggaggtg
ggaaatgccatcctgttctgcctgctgtgtgagcagagcctgtcccaggaagaagtctgt
gatttgctgcatgctgcacctttccagaacattcttccaagagtccacgtcaaagaaggg
gaacggctggaggccaagatgaaacgcctggaaaccaaatacacggctctacacatggtt
ccgcttatcgagcggctcgggaccccccagcaaatagccatcgctcgtgagggtgacctg
ctgaccaaggagaggctttgctgcggcttgtccatgtttgaagtcatcctcactcgcgta
cgaggcttcctggatgaccccatctggcgcgggcctttgcccaccaatggcgtgatgcat
gtggacgactgcgtagagttccaccgcctctggagcgccatgcagtttgtgtactgcatc
cctgtgggcgccaacgagttcaccgtggagcggtgctttggcgacggcctccactgggcc
ggctgcatgatcatcaccctcctgagccagcagaggcgctttgacatcctcgacttcagc
taccaccttctcaaggtgcagaagcacgacggcaaagacgagatcatcaagagtgtgcct
ctgaagaaaatggttgaccgaatccgcaagttccaagtcatcaacaatgagatctttggg
atcctgagcaagtacatgaagtctggagacggtgagaacatgccagtggaacacgttcga
tgcttccagccacccatacaccagtcgctggccagcagctga
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