Oryzias latipes (Japanese medaka): 101169467
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Entry
101169467 CDS
T02443
Name
(RefSeq) partitioning defective 6 homolog gamma isoform X1
KO
K06093
partitioning defective protein 6
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04144
Endocytosis
ola04517
IgSF CAM signaling
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101169467
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101169467
09144 Cellular community - eukaryotes
04530 Tight junction
101169467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101169467
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
101169467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
101169467
NCBI-ProteinID:
XP_004074289
UniProt:
A0A3B3I091
LinkDB
All DBs
Position
11:23945055..23988014
Genome browser
AA seq
445 aa
AA seq
DB search
MNRSFNKSQPLRHIDCNAVEVKSKYGAEFRRFSVDRVKPGRFEEFYKLLLHIHRIANMEM
MIGYADVHGDLLPINNDDNFCKAVSTAHPLLRIFIQRQEEVDYSTFGTNTITRKKKAVVA
LRNSDISRRRPNIHIGMPHDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
MRVTPHGVEKVPGIFISRMVPGGLAESTGLLAINDEVLEVNGIEVSGKSLDQVTDMMIAN
SHNLIVTVKPVNQRNNVVRSSRISGSSGQSSDSSGSTGYPSLSMAVARETPPGAHGYHDD
LESDEETDIVIESSLKRPSQRSSSSLASSASRTQQQQLPPSHRNPPTRPSSMVLTASFHS
QTSLNGGSPHHHHHHHGSLNQQLHKEPKHSQQQKPGQPQLHSSNPALRHSNGSLHKILNS
LKTDPRHSFALPKGGVEEDGTVITL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagttttaataaatcacagcctttgcgacacatcgactgtaacgccgtggaa
gtgaaaagcaagtatggagcagagtttcgccggttctcagtggaccgggtcaaacctgga
aggttcgaggagttctacaagctccttttgcacattcaccgcattgctaatatggagatg
atgattggctatgccgatgtccatggggacctgctgccgataaacaacgacgacaacttt
tgcaaagcggtgtcgactgctcatccactcctcaggatattcatacagagacaagaagag
gtggactacagtacttttggcaccaacacaataacgcgtaagaagaaggctgtcgtggcg
ctgcgcaacagcgacatcagccgcaggcgccccaacatccacatcggcatgccgcacgac
ttccggcccgtttcctccatcatcgacgtggacatcctgcctgaatctcaccgccgcgtc
cgcctgtaccggcacggctcggacaagcctctgggattctacatccgggacggcaccagc
atgcgcgtgacgcctcacggcgtggagaaagtgccgggcatcttcatatcccgcatggtg
ccggggggtctggccgagagcaccgggctgctggccatcaacgacgaggtgctggaggtg
aacggcatcgaagtgtcggggaagtcgctggatcaggtgacggatatgatgatcgccaac
agccacaatctgatcgtgaccgtcaagccggtgaaccagcgcaacaacgtggtccgcagc
agcaggatctccggcagctccggccagtcgtccgacagcagcgggtcgaccggttacccg
agtttgtcgatggccgtagcgcgggagacgcccccgggagcgcacggttaccacgacgac
ctggagagcgacgaggaaacggatatcgtcatcgagagcagcctaaagcggccgtctcag
cggtccagctcctctttagcgtcgagcgcatcacgcacgcagcagcagcagctgccgccg
tcccaccgcaacccccccacacggccctcctccatggtcctcactgcgtccttccactcc
cagacgagtctgaacggagggtccccccaccaccaccaccaccaccacggcagcctcaac
cagcagctccacaaagagccgaagcacagccagcagcagaaacccggtcagccgcagctc
cacagcagcaaccccgccctccgacacagcaacggcagcctgcacaaaatcctcaactcc
ctgaaaacggacccacgacacagcttcgccctccccaagggaggggtggaggaggatggc
accgtcattaccctataa
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