Oryzias latipes (Japanese medaka): 101169567
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Entry
101169567 CDS
T02443
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101169567 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101169567 (usp42)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101169567 (usp42)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101169567 (usp42)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101169567 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101169567
NCBI-ProteinID:
XP_023805337
LinkDB
All DBs
Position
19:3697686..3709751
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AA seq
1142 aa
AA seq
DB search
MTIVDRSSEKSDHESVGFNRSTFTSGDIGMEGSCSSSWAGGPTLPCDSPRLKSPGGCMGP
TPGAAVYNSTPSSVDRPKDQVVSSSDGIELPQKILFPPERLTLKWNQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPLANHMLSREHSKTCQEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLSCKAVSDTFDPFLDITLEIKMAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPESLDLRPFMSQSQGEPQNYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKTSDVKKVG
DYSSSSRSPSISGQSSPRPVVTPRSNAIHHNVGFIGPQLPQHAAKSSTHLNGNGAHKDYP
GGSKGASSSVLGKPTHVLPSSSSSSSSSSSSSSSSSSVSHSVSRPTMIPDQDKRQRLSFF
IGQGKQNRPSSSHSQSYPTSSSGSLSSSHSTSDIRFVPRQLNHVNGAVCSNGDQPSEGNG
ASLLVPYSQESSEESEPENAASLDNGCLSRSKGSNAAESICASSPKVTNGEAGARRNDSE
LSGPTYGASNQNGYLHPKVNGLKAPEKVSGSSSSVTAVANGVDGGHTQPNKEAKAAASSQ
SGSVQNLQPAANESQRFQAADARATMLPEAPPPHTAVSCPPSAGELPSAADAETAPSSSQ
RGCFQSTSGLSASTQKPSKSEDDGERFPRTNGPTEGETGAKEPTSSSRGDDRQPTRDRDG
VQADCRKHYRDRSPRRQTDGDRYRYRRDYRDHHHSYRDRFPPPERHWERKVFHPREYDRS
SRRSYHHGHYYHRSDTDYERRGYNYPHREEAPGSWRWQQYNREPRAMKRSTWERDHCRSR
DRSASPDALREPIKSKGSPQQDRLSSQELSSRRDDGSHKRTAGHASKEREDSSEPHRCRK
HKKSKKKKSKDKERHHRSGSSDVDSASESRRKKKKRRRHRDGDPERRSSDAARSHENRSS
DERESRKRHRDSGPPPEKRRRTDHSRDHLPPPCLSPPSTASSHRHLNGYSENGFGRADFY
SH
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttctgagaagtctgaccacgagtcagtcggatttaaccgg
tccaccttcaccagtggagacatcgggatggagggcagttgttccagcagctgggcgggg
ggtcccaccctgccctgcgactccccgagactcaagtctccaggaggctgcatgggtcca
actcctggcgctgctgtctacaacagcacgccgtcctctgtggatcgaccaaaggaccaa
gttgttagtagcagtgatggaatcgagctgccacagaagatcctgttccctccagagcga
ctcaccctgaagtggaaccaggttcaccgcatcggtgctggtctccaaaacatggggaac
acctgcttcctcaactccgccctgcagtgtctcacatacacccctcccctagccaaccac
atgctgtcccgagagcactccaagacatgtcaagagccgggcttctgtatgatgtgcacc
atgcagaaccacatcattcaggtttttgccaactcaggcaacgtcattaaacccattggt
gtcctcaatgagctcaaaagaattgcaaagcacttccgctatggaagccaggaggatgca
cacgagttcctgcggtacacagtggacgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcagacgcaggcaaccaccttcattcatcaagtatttggcggataccttaga
tctagagtgaaatgtttaagctgcaaagccgtctcagacacattcgacccttttctggac
attactttagaaatcaagatggctcccagtgtgtccaaagctctggagcagtttgtcaag
ccagagcagctggacggtgaaaacgcctacaaatgtacaaagtgcaagaaaatggtcacc
gcctcgaagagattcacgatccaccgcagcccaaacgtgctcaccctctcactcaaacgg
ttcgccaactttaccggaggaaaaattacaaaggatgtgaaatatccagagagcctggac
ctgcggccttttatgtcccagtcacaaggagagccacagaactacggattatacgccgta
ctggttcactccggattcagctgtcacgctggacactacttctgttatattaaggccagc
aacggtcaatggtatcagatgaacgactcctctgtgtccgtcagcgacatccggtctgtc
ctcaaccagcaggcttatgttcttttctacatcaagacctcagacgtgaaaaaagttggc
gactacagcagctcgagccgcagcccgagcatctccggtcagtcgtctccgcgtccagtg
gtgacgccgcgcagcaacgccatccatcacaacgtgggcttcatcggtccccagctcccc
caacacgctgccaagagctctacccaccttaacgggaacggagctcataaagactacccc
gggggctccaaaggcgccagcagcagtgtgctgggaaaacccacccacgtattgccttcc
tcttcctcctcctcctcctcctcttcctcctcctcctcctcctcctcctctgtttcacac
tcagtcagccgacccacgatgattccggaccaggacaaacgacaaagactttcatttttt
attggacagggcaaacagaaccgaccgtcatcttctcacagtcagtcatatcccacaagt
tcctccggttctttatcttcctcacactctacctcagacattcgatttgttccgcgccaa
ctcaaccacgtcaacggcgcagtgtgcagtaacggagatcagccgagcgaagggaacgga
gcgtccctcttggtgccctacagccaggagtcctcagaagaatctgagccggagaacgcc
gcctctctggacaacggctgcttatctagaagcaaaggaagcaacgccgcagaaagtatc
tgcgcttcctctcctaaagtcaccaacggggaggcaggcgctcgccgcaacgacagtgaa
ctcagtggaccaacctacggagcgtctaaccagaacggttatttacaccccaaagtgaat
ggactcaaggccccagagaaggtctctggaagttcatcctctgtgacggctgttgccaac
ggagtcgatggtggccacactcaaccaaataaagaggcgaaggctgcggcttcctcccag
tccggttctgtccagaaccttcaacctgctgctaatgaaagccagcgcttccaggcggcc
gatgcaagggctactatgctgcctgaagccccacccccccacaccgctgtcagctgtccg
ccttcagccggcgagctcccctccgctgcggacgcagagaccgctccttcgtcctcacag
cggggctgctttcagagcaccagcggcctttctgcatccacgcagaagcccagcaagagc
gaggacgacggcgagcgcttcccgagaacaaacggtccgacggaaggagagacgggagct
aaagagcccacgtcgagttccagaggtgacgacaggcagccgactcgcgacagagacggc
gtgcaggctgactgcaggaaacactacagggacaggagcccgcggcgccaaactgacggg
gatcgttatcggtaccggcgagactacagagaccaccatcactcgtacagggaccgcttt
cctcctcccgagcgtcactgggagcggaaggtcttccaccccagagagtacgaccgctcc
tcacggcgctcttaccatcacggccactactaccaccgatccgacacagactacgagcgg
aggggatacaactacccccaccgcgaggaggccccaggctcctggaggtggcagcagtac
aaccgagaaccccgtgcgatgaagaggagcacctgggagagggatcactgccgctcacga
gacagaagcgcttcacccgatgcgctccgggaaccgatcaagtccaagggctccccccag
caagatcgcctgtccagccaggagctttcctctaggagggacgacggcagtcacaagagg
actgccggtcacgcgagtaaggagagagaagacagctctgagcctcatcgctgcagaaaa
cacaaaaaaagcaagaaaaagaagtcgaaagataaagagcgacaccacaggagcggaagc
tccgacgtggactcggcctccgagagcagaaggaaaaagaagaagaggcggcggcaccgg
gacggcgaccccgagcgacggagctccgacgcggctcggagccacgagaacagaagcagc
gacgaaagggaaagccgaaagcggcatcgcgacagcgggcccccgcctgaaaaacgacgc
cgcacagaccacagcagggaccatctacccccaccgtgtctcagccccccctcaaccgct
tcatcccaccgacacctcaacggatactcggaaaacggatttggccgagccgacttctac
tcccactga
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