Oryzias latipes (Japanese medaka): 101169589
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Entry
101169589 CDS
T02443
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04371
Apelin signaling pathway
ola04514
Cell adhesion molecules
ola04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
101169589
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101169589
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101169589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101169589
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101169589
04090 CD molecules [BR:
ola04090
]
101169589
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
101169589
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Major cadherins
101169589
CD molecules [BR:
ola04090
]
Proteins
101169589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_3
Cadherin_4
Cadherin_2
Big_9
Motif
Other DBs
NCBI-GeneID:
101169589
NCBI-ProteinID:
XP_004086222
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All DBs
Position
15:9139433..9154604
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AA seq
900 aa
AA seq
DB search
MGTAWIAVFGVFFFILEVSVVSTTQESPCKPGFESDLLIFKVNRKHLKAGTRLGKVGFTD
CTDRIRFLFSTDDSRFVFTTDGVLTVKRAVVLHEGHLDFFVHSWDSQGNKMTVPVMVLRH
GHHHVSRDAERHHGGHRHQNHHNTEVDSADTKETAGHPDVAVLYFPKSSKGLRRRKRDWV
IPPINIPENSNGPFPLKMVTIRSSEDKIKKIIYSITGPGANEDPVGLFTMDKDTGDLYVH
QRLDREKQAHYTLLAHADVEDPMEIIINVIDMNDNKPIFEQTSYVAEVAESSPKGTTVIQ
VKATDADEPGNDNSIIKYTILSQEPKLPSDSMFAINSFNGAIMVEGVGLDREKYPEYTLE
IQAADTKGEGLTGKTKVTLKVTDSNDNPPVFTASTYQGSVDENAVGVLVVKMLVTDEDEP
NTPAWNAKFKIVGGDPDKFFSIETGTNKQEGIIKTIKGLDFETNRKHTLLVRVENDVPFA
IPVVTSTATVVVTVKDVNEPPIFKEKEMTVQKREDLSVESVVIKSEAEDPDFARENIVKY
KIINDPDNWLKVDEDSGLVKVKSDMDRESPNVKDNKYTVLLGAYDNDPVPATGTGTLIII
LEDVNDNAPAIVERETQICKHQRTPALLSIVDKDEAAHSAPYSVAVHEKYSANWTAKMNE
SKTGIELFLKSDIPEGKYKVVLRVADRGNLDQESSINVEVCTCLENGLCSLARIGGQEEM
SPYIWGILGALLLLLVIAVLGLYAYNKRQKKGEIGEPFEKDIIRDNIYHYAEEGGGEDDQ
NFDLSVLHYGLDNKPDVLRSDMMPVTMSRPTYRTLPANPDEIGNFIEDNLKAADEDPTAP
PYDSLLVFDYEGGGSDAGSLSSLNSSNSGDQDYNCLTEWGPRFKKLADMYGGGEDDDDML
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcttggattgcggtttttggagtttttttcttcattcttgaggtctcagtt
gtgtcgaccacacaggagtcgccatgtaaacctggatttgagtcagatttgttaatattc
aaagtgaacaggaagcatctgaaggcaggcacaagactgggcaaagttggattcactgac
tgcacagatcgtataaggtttctcttcagcacagatgacagtcgctttgtgttcactact
gatggagtattaactgtgaaaagagcagttgttctccatgaaggacatctggactttttt
gtccactcctgggactcacagggcaacaaaatgactgttcctgtcatggtcctgcgacat
ggacatcaccatgtaagcagagatgctgagcggcaccatggaggccacagacaccagaac
catcacaacactgaagtggattctgccgataccaaagagactgcaggacatccagatgtg
gccgtcctttattttcccaagtcgagtaaaggactgaggaggaggaagagagactgggtc
atccctccaatcaatattcctgagaatagcaatggaccctttccacttaaaatggttacg
attcgctccagtgaggacaaaataaagaagatcatctacagcatcacaggtccaggagcc
aatgaagatccagtaggactctttacaatggacaaagacactggtgatctgtatgttcat
cagagacttgacagagagaaacaagcacattatacactgcttgcacacgctgatgtggag
gatcctatggaaatcatcatcaatgtcattgatatgaatgacaacaaacctatttttgaa
cagacatcctatgtggcagaagttgctgaatcttcaccaaaagggactacagtgattcag
gttaaagccactgatgctgatgaaccaggcaatgacaactcaattatcaaatacacgatt
ctgagccaggaacctaaacttcccagtgattccatgtttgccattaactccttcaatgga
gccatcatggttgaaggtgttggtttggacagagagaaatatcctgaatacactctggaa
atacaagcagcggatacaaagggagaaggattaactggaaaaacaaaagtaactttgaaa
gtgacggacagcaacgacaaccctccagtctttactgcatctacttatcagggatcagtt
gatgaaaacgcagtgggggttctggttgttaaaatgttagtaactgatgaagatgaacca
aacaccccagcatggaacgccaagttcaagattgtcggaggagatcctgataaattcttt
tccatagaaacaggaaccaacaaacaagaaggaatcatcaaaactattaagggactggac
tttgagacaaacagaaaacacactctgttggtaagggtagagaacgacgtcccttttgcc
attccagtggtcacctccaccgccacagtggtggtgaccgtgaaggacgtcaatgagcct
ccgatctttaaagaaaaggagatgaccgttcaaaagcgtgaggacctttctgtggaaagt
gtggttattaagtctgaggcagaagatccagactttgcacgtgaaaacattgttaagtat
aaaataattaatgaccctgataactggctgaaagtggatgaggattcagggctggtgaag
gtgaaaagcgacatggacagagagtcccctaatgtgaaggacaataaatacacggtgctc
cttggtgcttatgataacgatccagtcccagccactggaactggcacgttgatcattata
cttgaagatgtcaacgacaacgccccagcgattgtagaacgggaaacacagatttgcaag
caccagcggactcctgcactgctgagtatagtggataaagatgaagccgctcattctgct
ccgtacagtgtggccgttcatgaaaagtactcagccaactggacggctaagatgaacgaa
agcaaaactggaatcgagctgtttttaaagtcggacattcctgaaggaaaatacaaagtg
gtcctgagggttgcagatcgtggtaacctggaccaggaaagctccatcaatgtagaagtg
tgcacctgtttagaaaatggactttgttctctggctagaattggtgggcaagaagaaatg
tctccatatatttggggaatacttggagctctgctgctgctgctggtaattgctgttttg
gggttgtatgcatacaataaacggcagaagaaaggagaaatcggagagccgtttgagaaa
gatataatcagagacaacatctaccactacgctgaggagggaggcggagaagacgatcaa
aattttgatctgagcgttcttcactacggtctcgacaacaaacccgacgtattgcggagt
gatatgatgcctgtgaccatgtctcgccccacctaccgaactttgcccgccaacccagat
gaaattggcaactttattgaagacaacttgaaggcagcagacgaagaccccaccgcgccc
ccctatgactcgcttctagtgtttgattacgagggtgggggttcggacgcaggaagcctc
tcgtccctgaattctagcaacagtggagaccaggactacaactgcctcaccgagtggggc
ccccgtttcaagaagctggctgacatgtatgggggaggagaagatgacgatgacatgctg
tga
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