KEGG   Oryzias latipes (Japanese medaka): 101169589
Entry
101169589         CDS       T02443                                 
Name
(RefSeq) cadherin-1
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04371  Apelin signaling pathway
ola04514  Cell adhesion molecules
ola04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    101169589
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    101169589
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    101169589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ola03036]
    101169589
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ola04515]
    101169589
   04090 CD molecules [BR:ola04090]
    101169589
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    101169589
Cell adhesion molecules [BR:ola04515]
 Cadherins
  Major cadherins
   101169589
CD molecules [BR:ola04090]
 Proteins
  101169589
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_3 Cadherin_4 Cadherin_2 Big_9
Other DBs
NCBI-GeneID: 101169589
NCBI-ProteinID: XP_004086222
LinkDB
Position
15:9139433..9154604
AA seq 900 aa
MGTAWIAVFGVFFFILEVSVVSTTQESPCKPGFESDLLIFKVNRKHLKAGTRLGKVGFTD
CTDRIRFLFSTDDSRFVFTTDGVLTVKRAVVLHEGHLDFFVHSWDSQGNKMTVPVMVLRH
GHHHVSRDAERHHGGHRHQNHHNTEVDSADTKETAGHPDVAVLYFPKSSKGLRRRKRDWV
IPPINIPENSNGPFPLKMVTIRSSEDKIKKIIYSITGPGANEDPVGLFTMDKDTGDLYVH
QRLDREKQAHYTLLAHADVEDPMEIIINVIDMNDNKPIFEQTSYVAEVAESSPKGTTVIQ
VKATDADEPGNDNSIIKYTILSQEPKLPSDSMFAINSFNGAIMVEGVGLDREKYPEYTLE
IQAADTKGEGLTGKTKVTLKVTDSNDNPPVFTASTYQGSVDENAVGVLVVKMLVTDEDEP
NTPAWNAKFKIVGGDPDKFFSIETGTNKQEGIIKTIKGLDFETNRKHTLLVRVENDVPFA
IPVVTSTATVVVTVKDVNEPPIFKEKEMTVQKREDLSVESVVIKSEAEDPDFARENIVKY
KIINDPDNWLKVDEDSGLVKVKSDMDRESPNVKDNKYTVLLGAYDNDPVPATGTGTLIII
LEDVNDNAPAIVERETQICKHQRTPALLSIVDKDEAAHSAPYSVAVHEKYSANWTAKMNE
SKTGIELFLKSDIPEGKYKVVLRVADRGNLDQESSINVEVCTCLENGLCSLARIGGQEEM
SPYIWGILGALLLLLVIAVLGLYAYNKRQKKGEIGEPFEKDIIRDNIYHYAEEGGGEDDQ
NFDLSVLHYGLDNKPDVLRSDMMPVTMSRPTYRTLPANPDEIGNFIEDNLKAADEDPTAP
PYDSLLVFDYEGGGSDAGSLSSLNSSNSGDQDYNCLTEWGPRFKKLADMYGGGEDDDDML
NT seq 2703 nt   +upstreamnt  +downstreamnt
atggggaccgcttggattgcggtttttggagtttttttcttcattcttgaggtctcagtt
gtgtcgaccacacaggagtcgccatgtaaacctggatttgagtcagatttgttaatattc
aaagtgaacaggaagcatctgaaggcaggcacaagactgggcaaagttggattcactgac
tgcacagatcgtataaggtttctcttcagcacagatgacagtcgctttgtgttcactact
gatggagtattaactgtgaaaagagcagttgttctccatgaaggacatctggactttttt
gtccactcctgggactcacagggcaacaaaatgactgttcctgtcatggtcctgcgacat
ggacatcaccatgtaagcagagatgctgagcggcaccatggaggccacagacaccagaac
catcacaacactgaagtggattctgccgataccaaagagactgcaggacatccagatgtg
gccgtcctttattttcccaagtcgagtaaaggactgaggaggaggaagagagactgggtc
atccctccaatcaatattcctgagaatagcaatggaccctttccacttaaaatggttacg
attcgctccagtgaggacaaaataaagaagatcatctacagcatcacaggtccaggagcc
aatgaagatccagtaggactctttacaatggacaaagacactggtgatctgtatgttcat
cagagacttgacagagagaaacaagcacattatacactgcttgcacacgctgatgtggag
gatcctatggaaatcatcatcaatgtcattgatatgaatgacaacaaacctatttttgaa
cagacatcctatgtggcagaagttgctgaatcttcaccaaaagggactacagtgattcag
gttaaagccactgatgctgatgaaccaggcaatgacaactcaattatcaaatacacgatt
ctgagccaggaacctaaacttcccagtgattccatgtttgccattaactccttcaatgga
gccatcatggttgaaggtgttggtttggacagagagaaatatcctgaatacactctggaa
atacaagcagcggatacaaagggagaaggattaactggaaaaacaaaagtaactttgaaa
gtgacggacagcaacgacaaccctccagtctttactgcatctacttatcagggatcagtt
gatgaaaacgcagtgggggttctggttgttaaaatgttagtaactgatgaagatgaacca
aacaccccagcatggaacgccaagttcaagattgtcggaggagatcctgataaattcttt
tccatagaaacaggaaccaacaaacaagaaggaatcatcaaaactattaagggactggac
tttgagacaaacagaaaacacactctgttggtaagggtagagaacgacgtcccttttgcc
attccagtggtcacctccaccgccacagtggtggtgaccgtgaaggacgtcaatgagcct
ccgatctttaaagaaaaggagatgaccgttcaaaagcgtgaggacctttctgtggaaagt
gtggttattaagtctgaggcagaagatccagactttgcacgtgaaaacattgttaagtat
aaaataattaatgaccctgataactggctgaaagtggatgaggattcagggctggtgaag
gtgaaaagcgacatggacagagagtcccctaatgtgaaggacaataaatacacggtgctc
cttggtgcttatgataacgatccagtcccagccactggaactggcacgttgatcattata
cttgaagatgtcaacgacaacgccccagcgattgtagaacgggaaacacagatttgcaag
caccagcggactcctgcactgctgagtatagtggataaagatgaagccgctcattctgct
ccgtacagtgtggccgttcatgaaaagtactcagccaactggacggctaagatgaacgaa
agcaaaactggaatcgagctgtttttaaagtcggacattcctgaaggaaaatacaaagtg
gtcctgagggttgcagatcgtggtaacctggaccaggaaagctccatcaatgtagaagtg
tgcacctgtttagaaaatggactttgttctctggctagaattggtgggcaagaagaaatg
tctccatatatttggggaatacttggagctctgctgctgctgctggtaattgctgttttg
gggttgtatgcatacaataaacggcagaagaaaggagaaatcggagagccgtttgagaaa
gatataatcagagacaacatctaccactacgctgaggagggaggcggagaagacgatcaa
aattttgatctgagcgttcttcactacggtctcgacaacaaacccgacgtattgcggagt
gatatgatgcctgtgaccatgtctcgccccacctaccgaactttgcccgccaacccagat
gaaattggcaactttattgaagacaacttgaaggcagcagacgaagaccccaccgcgccc
ccctatgactcgcttctagtgtttgattacgagggtgggggttcggacgcaggaagcctc
tcgtccctgaattctagcaacagtggagaccaggactacaactgcctcaccgagtggggc
ccccgtttcaagaagctggctgacatgtatgggggaggagaagatgacgatgacatgctg
tga

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