Oryzias latipes (Japanese medaka): 101169615
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Entry
101169615 CDS
T02443
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101169615 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101169615 (ttc37)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
101169615 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_19
TPR_14
TPR_17
TPR_8
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_9
ARM_TT21_C
TPR_7
ANAPC3
RPN7
TPR_MalT
TPR_15
TPR_21
COG4_N
FlbT
SNaCT10
DUF4363
Motif
Other DBs
NCBI-GeneID:
101169615
NCBI-ProteinID:
XP_004072700
UniProt:
H2M3D3
LinkDB
All DBs
Position
9:complement(16114465..16131278)
Genome browser
AA seq
1584 aa
AA seq
DB search
MLHSGYLANTHTTVIYEMSSKEVKAALKSARDAIKNKEFKEALKHCKTVLKLEKSNYNAW
VFIGLAACELEQTDQSLTAYKKAIELDPEQLLAWQGLANLYEKTDQWDFKVELPNVYQKL
VELYSSSDKNKCYDMIKKLSDIYQSDREQIKLAKVWQQLIQLKEEDGVEKKELVKLLKDM
IQLLSESLNETEQDNGTHQHLIAAFEKAMALVEPVPGEEHKKISADYLKCLSKLPCEEAK
IKEACESVLSLYPNHSYPLEVLCGHYLKTGNMDENAVSCFSRLQDLAPNSGLSHLGLGTK
SLQEGRYNDAINNLTKGLKRMSLSTGWCSLAEAQFKTHRYSDCAVSCSQGLKACEDEKLR
SKLLSLKLQALVKSGEERATDEALDTFSQIPEAEQDPSMLALKGYAYLNKGQIDRALQVS
SELLDSNPDLVEGLALRALAYLAEGQQQLAEESLLKAVSHSPNTGEYYFLLGKLYWEMGP
ETRKDRSKAHTHFLKAAKFDPHLGCAFRYLGHYYREVAGDRGRAQGCYKKAFELNGDDNE
SGAASVDLSIEQGDMETALRILQSVTEKATPGSAKWAWMRRGLYYLKVEEHQQAVADLQA
ALRADPEDWVCWECLGEAYLKRRSFTAALKAFGRAHQLQPSSIYSVYQAAAIKQTLGKFK
EAAAEYLLITTKQDYVPALKGLGECQLSLAKSLMEDCRDGGAIDLIEKAIQNLFRAVQLR
PDLSCLWKLLGDASTAVSIVSPNRAQVLVPASLAGLDSSSQANRLNQVQMLKVGERCYAR
ALKLMPEAPSLWYDLGLNYYRQAASQSALTEENQNSPSQDLEKAHQCLKKSIMMDSGNYS
YWNALGVVSMNKGLENFALAQHCFIKSIQAEPNNVVAWTNLGTLYLKKENIELAHEAFKI
AQSLEPLYVNCWIGQALIAEGVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTMLDKSN
RNTELYRYNIVQMNAISAAQVALSKYTERIQSDPEAFTMLGYLNEHLHLNRQALQAYQRA
VELLQSTPSSEELAFSLGNYGRALCNLGQLEEAVRAYNSTPLQDLSDLVGLALAYCRSGL
LQESIATYERALAVASSEKEKAYLLTALALLQHRHGNLDSAKTLLFKCSMLKEPISESLL
CLCALGLVHSDATLAAAALAELLKQDSTSEGVVQQQCLLTCALLALRGSYVAVQREASRA
VHRNPGNPSLWALLSRVVPQFYPRKANGGAVAGYVACLSSMTQGKRALLYSGLNQLATGR
HSGEDKYKNALKTIQRAVLLCPDDPAAWAALMAACHTENTSCYLSGSAPCRQSLEHTLMS
VVSMKVQNVEEIERPLAQSLEGWVLQQAVTGLMMEGQLDQAEALCTQVLSVSPEHPAVLL
SLRQVQCQRLLLASPEPVLPEVVLEQLNKAVLMNPTNLGAWHWLADVYRSQGLLVQAVMA
YRQSLQLASQLGVHSYQVASLLRLALLALGPCMVDVTGNDWKDLVMEATTEVLKLGSFPV
AHLFQALLQFVDKMNSRETRRLLERLVYTSSQDFPVTVAQVASWYLLRHLHAKHDQELID
VLLQHAKKKDDQRLLVFHSLLNGS
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgctacacagtggttatctggctaacacacacaccactgtcatctatgaaatgtcgagt
aaagaagtgaaagctgcactgaaaagtgccagagacgccatcaaaaacaaagaattcaaa
gaggccttaaagcattgcaagactgtcttgaaacttgaaaaaagtaattacaatgcgtgg
gtattcatcggcctggccgcctgtgagctggagcaaacggatcagtccctgactgcttat
aagaaagcaatagaactggatccagagcagctgctggcctggcagggcttagcaaatctt
tatgaaaagacggatcagtgggatttcaaagtggagctgcctaatgtgtaccagaagctt
gtagaactgtattcaagttcagataaaaacaaatgttatgacatgatcaaaaagctgtcc
gatatttatcagtctgacagagaacaaataaagttggcaaaggtttggcagcagctaatt
cagctaaaggaggaagacggggtggagaagaaagagctggtgaagctgttgaaagacatg
atccaactcctttcagaaagtctgaatgagacggagcaggacaatggaactcaccagcat
ttaattgcagcatttgagaaagccatggctctcgttgaacctgtgccaggagaggagcac
aagaagatatcagctgattatcttaaatgtctttccaagctgccgtgcgaagaagccaaa
ataaaagaagcgtgtgagtctgtgctctccctgtatcccaaccacagctatccccttgag
gtcctttgcggtcactacctcaaaacaggtaatatggatgagaatgcagtcagttgtttc
tcaaggctccaggatttagcccccaacagtggtttaagtcacttgggtttgggtactaaa
tcactccaagagggaaggtacaatgatgccataaacaatctaacaaaaggtctaaagcga
atgagcttatcaacaggatggtgtagcctggcagaggctcagtttaaaacacacagatac
tccgattgtgccgtgtcatgctcccagggtttgaaagcttgtgaggatgaaaagctgagg
agcaaacttctcagtctgaagttgcaagctttagtgaaaagtggagaagaacgtgcaaca
gatgaggctctagacacattttcacagattccagaggctgaacaggacccgtcaatgcta
gcccttaaaggatacgcataccttaacaaaggacagattgacagagccctccaggtgtca
tcggagctgctggattccaatccagacctggttgaaggattagcactgagggctctcgca
tacttagctgaaggtcagcagcagttagcagaggaaagtttgctaaaggctgtgagccat
agtccaaacactggagaatattatttcctgcttggaaaactctactgggaaatggggcca
gagactcgcaaagacagaagcaaagcccacacacactttttaaaggctgcaaagtttgac
ccacaccttggctgtgcctttcgctatcttggccattattaccgggaggtggccggtgac
cgcggccgtgctcagggctgctataagaaggcctttgagttgaacggtgacgataatgag
tcgggagctgcatcagtggacctcagtatagagcaaggagacatggagactgccttaagg
attcttcagtctgtgactgagaaagccactccaggttcagctaaatgggcctggatgagg
cgcggcctgtactacctgaaagttgaagaacatcaacaggctgtagctgatttgcaggca
gctttaagagcagaccctgaggactgggtttgctgggagtgtttaggtgaggcatatttg
aagaggcggagcttcacggcagctctcaaggccttcggcagagctcatcagcttcagccg
tcctccatctacagtgtctaccaagcagctgctatcaaacagactctggggaagtttaag
gaggctgctgcggagtatttgctaatcacaaccaagcaggactatgttccagctcttaaa
ggccttggtgagtgtcagctgtctcttgcaaaaagtttaatggaggactgcagagatggt
ggagcaattgatctcatcgagaaagccattcaaaaccttttcagggctgtacaactgcga
ccagatctgtcttgtttgtggaagctactgggagacgctagtactgcagtcagcattgtt
tctccaaaccgagcccaggttttggtgccagcctcactagcaggtttagactccagctcc
caggctaacaggctgaaccaggtccagatgcttaaagttggtgagcgatgttatgctcgt
gctttaaagctaatgcctgaagctcccagcctttggtacgatcttggacttaactattac
cgtcaggctgctagccaatctgctctcacagaggaaaaccagaactctccatctcaggac
ttggagaaagcccatcagtgtttgaaaaagtcaatcatgatggacagtggaaactatagc
tactggaatgcactgggagtggtttcaatgaacaaaggtctggagaactttgctttggct
cagcattgtttcatcaagtccatccaagctgaaccaaacaatgttgttgcttggacaaac
cttggcaccctgtacttgaagaaggaaaacatagagcttgcacatgaagccttcaagatt
gctcagtccttagaacccctatatgtcaactgctggattggacaggcgctgatagcagaa
ggtgtgggaagctacgacaccatggatcttttcaggcacaccaccgaactcagcactcat
atggagggagtgaagggttatgcctactgggtttgctccaccatgctggataagagcaat
aggaacactgagctttaccgctacaatattgtgcaaatgaatgcaatctctgctgctcag
gtggctctcagcaaatacacagagagaatccagtctgaccccgaagcttttactatgctg
ggctaccttaatgagcatctgcatctgaacaggcaggccctacaggcttatcaaagagcg
gttgaattgcttcagtccacgccgtcctcagaggaactggctttttctcttggcaattat
ggccgtgctttgtgcaacttaggtcaattggaggaggccgtacgtgcttacaattccact
ccactgcaggatctcagcgacctggttgggcttgctttggcctactgcaggtcaggactc
ctccaggaaagcatcgcaacatatgagcgtgccttggctgtggcttccagtgagaaagag
aaggcttacttattgacggctctggcactactgcagcatcggcacggcaacctggactct
gccaagactctgctgttcaaatgctcgatgttaaaggagccaatctccgagtctttgctg
tgcttgtgcgccctgggactggtccatagtgatgctacgttagctgctgctgccctggct
gagcttctgaagcaggattccacctcggaaggggttgtgcagcagcagtgtctgctcacc
tgcgccctgctagccctgcggggcagttatgttgcagtccaaagagaggcctccagagct
gttcacagaaatccaggaaacccatctttgtgggcccttctgtccagagtggtaccacag
ttctaccctagaaaggcaaatggtggggctgtagctggttatgttgcctgtctctccagt
atgactcaaggaaagagggcgctgttgtacagcggactgaaccagctggctactggcaga
cactctggagaggacaagtataagaatgctctgaagacaatacagagagctgtgctgctc
tgcccagatgatccagccgcatgggccgcattaatggctgcatgtcatacagaaaacact
tcctgttatctttctgggtctgccccttgcagacagtcactggaacacactctcatgtca
gtggtttctatgaaagtgcaaaatgtggaggagattgagcgccccttagctcagtctttg
gaaggctgggtactacaacaggctgtgacaggcctcatgatggaggggcagctggatcag
gcagaagccctctgcacacaggttctcagtgtgtcccctgaacacccagcagtgttgctg
tccctcagacaggtgcagtgtcagcgactgcttttggccagtcctgagcctgtgcttcca
gaggttgtgctggagcaacttaacaaagctgttctaatgaaccccactaaccttggagca
tggcactggttggcagatgtgtatcgaagtcaggggctcctggttcaggcagtgatggct
tacaggcagagccttcagcttgcttcacagctcggtgtgcacagctaccaggtagccagt
ctgctccgattagctctgctagctctagggccctgtatggtggatgtcacaggaaatgac
tggaaagacctggtgatggaagccaccactgaggtcctcaaactggggtcattccctgtg
gcccaccttttccaagccctgctccagtttgtggacaagatgaattcgagggaaacgaga
cggttgctggagcgtctggtctacacttcatcccaagacttcccggtgacagtggcgcag
gtggctagttggtacctgctcagacacttgcatgccaaacatgaccaggaactcatcgat
gtgcttttgcaacatgccaaaaaaaaagacgaccagaggctgctggtgtttcattcatta
cttaacgggtcctaa
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integrated database retrieval system
