Oryzias latipes (Japanese medaka): 101169724
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Entry
101169724 CDS
T02443
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X3
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101169724
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
DSCAM family
101169724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
C2-set_3
Interfer-bind
Sp38
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
101169724
NCBI-ProteinID:
XP_011481924
LinkDB
All DBs
Position
14:complement(16252201..16314520)
Genome browser
AA seq
2104 aa
AA seq
DB search
MGGAEAPLVSPPCIAGQQGWKELRGAKSPVQHGDLPGQKNAPHSYQDCQIFPKNIPAIYG
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQKITYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVQANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSLRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIAPGNRFSLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVHAG
QSIELPCIAGGYPTPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWYRNTQPIISDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVN
PGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQMVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGYASGVGIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMTNGSLLIRHVLEEDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSSPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRLTLHGVLKGYRVVFWSLFPDGE
WGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDLPGPPAGIK
AVPSSPNSVVVSWLPPLKPNGVIRKYTIYCSSPGSGQPAPSEYEANPEMLFYRITHLSRG
KQYHIWAAAVTTAGRGNISAKVTVEPAGKVPAKILSFGGTVTTPWMKEVRLPCASVGEPA
PTIKWTKDSEDSAIPVTADSQKQILSNGTLVLRSVKAEDSGYHTCTATNTLGFDTIIVNL
VVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSTER
SFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQPLLTHINSTHAGL
NLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTSQLFLSELREATWYELKMKACNSAG
CGNQTSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTIGVALLFIIRKKRKE
KRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIAGE
DKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPGTNPVSRKSIKSA
HSSRNRYSSQWTLSRPTQSHSTASARTLTSDWRTMGSHGITATESDSYSASLSQDTDKGR
NSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDPADSM
TSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPLYMKTDPFFRKQG
ELHDPCPAVPPREASIRSLAQRAYHTQGRHKTLDPSKQQTLTLGHSGLGSLGASSGTATL
PQRTLTMPSSNNAATASTSSTGSNPSNSNKVGGSRDSLLESSSSALGRLQKQSVGAYSKS
YTLV
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggccgaggcgcctctcgtttcccctccatgcatagcggggcagcagggctgg
aaagagctccggggagcaaagtcgcccgtccagcacggagacctgcctggccagaaaaac
gcgcctcatagttaccaggattgccaaatattcccgaaaaatatacctgctatttatggc
atgtggcttgtaactttactcctgctgtactctctccaggaagtacacagtgaggatgtg
ggctccaccaggctgtactttgtgaatgcctccctgcagaagataacctactccagctca
gtgggggtgtccctgccctgtcctgcagggggcacccccagtgccattctacgctggtac
ctggccactggcgacgacatttacgacgtgccccacatccgtcatgtgcaagccaacggt
actcttcaactgtaccctttctcgccctccgcctacaacagctacatccatgacaacgac
tacttctgcaccgccgaaaaccaggcgggcaaaatccgcagccccaacatccgcatcaaa
gctgttttcagggagccctatactgtgcgggtggcggatcagcgctcattgaggggcaac
gtagctgttttcaagtgcctcatccctgctgccgtgcaggagtacgtcagcgttgtatcc
tgggaaagagacactgtttccatagctccaggtaacagattttcgctgacctcctttgga
gctctttacatctctgacgttcagaaagaggatgccctctctacatatcggtgcatcacc
aagcataagtacagtggcgagacgcggcaaagcaatggagccaggctgtcagtcatggac
cccaatgaatcctcacccactatactggatagtttccaagcaggggaagtgcatgcaggc
cagagcatcgagctcccctgcatagcaggtggttatcctacacccactgtgcgctggctg
aaagatggtcgcccgctgccttcagatgcccgttggacacggcgcttgacagggttgacc
atcagtgacctgaggcaggaggacagcggcagctacgcctgcgaggtcaccaacagcttt
ggctccaaggaggtgtctggacagcttcacgttatcgatcctctgcgggtgaccttgtct
ccgaagaatttaaaaactggcatcagtagcacactgttcttcacgtgcactgtggagggc
tctccagaatacaccatcacctggtacaggaacacacagcccatcatctcagaccagcac
atctccatccagggacaacacaacgacaccctccagatcactgctgcacagaagttccac
tctggagcctaccagtgcttcgcatcccgaaagggccacactgctcaggacttttccatt
attttactagaggatggtactcctcgaattgtgtcttccttcagcgagcgggtggtaaac
cccggtgagcccttctcgctcatgtgtgccgccaaaggagccccacccccttcaattacc
tggacgttggatgatgagcccgtggtgcgagattccacttacaaaaccagccagtacact
ctgtctgatggtctgacggtgtcgcacgtcaacgtcagcagcccgctcatccgggatggg
ggagtgtatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggtccacctcgaataagacccatgcgagatatcactgcagtggcgggcaga
aacacctatatcacatgccgtgtgattgggtacccgtattattccataaagtggttgaaa
gacggcatgcagctacctgataatcatcgtcaaatggtgtttgagaatggcaccctgagg
cttacagatgtgcagaagggtgctgacgaggggacgtacttgtgtagtgttttgatccaa
ccccaagtctccattaaccagaccgtccatgtcactgttaaagtaccgccgctcatccag
cccttcgatatcccctctacctcagtggggaagctcatgtacattgcctgcgtggtgtct
tctggggacatgcccatacgcatcacttggcacaaagacggtcagctcatcgtgccaggc
tacgcctctggcgtcggaattgagaccaaagagttcatgagctccctgcagatctccaag
gtgacactgaagcacaacggaaactacacctgcatcgccagcaacgccgctgctacagtc
agctgggagaggcagctgattgttactgtcccaccccgttttgtggtgcagcctaacaac
caggactgcatatatggaaaggccggagtcctgaactgctcagtggaaggttatccacct
ccaaaagtcatgtggaaacacgctaaaggagttggaaacccacagcagtaccatccagtc
ccactcactggccgcatccagatcatgacaaatggctctttgctcattcgacatgttctt
gaggaagacagagggtactacctctgtcaggcctctaatggtgtgggctcagacatcagt
aaaagcatgatcctcactgtcaagattcctgccatgatcaccagccaccccaacaccacc
atggcaagaaagggccaaaccaaggagctgaactgcacagcacgaggcgagcagcctatt
attatccgctgggagagaggggacacagtcattgatgcagagagaaacccccggtactcc
atcaccattaacaagaagggtgatgaagtcatctccaccctaaagttgaatccagccgag
cgaggagactctgtcttcttctcctgtcatgccataaactcctatggagaaggtcgaggg
ctcatccagcttacagtgcaagaaccaccagatcctcctgagctggaggtcagagaggta
aaggaccggagcatgaacctgcgctggatccaaaggtttgatggcaacagcatcattacc
agttatgacattgagtacaagaacaaatcagactcctgggaccacatgtacacaaccagg
aacatttcaccgacaaacaaccaagctaacattgtggagttgcaccctgcctgcgtctac
agcatccgcatgtattcctacaacaagattggacgaagctcccctagcaaggagctcacc
atcagtactgaggaagcacctcctgatgggccaccaatggatgtcatcctccaaccaatg
acatctcagagcatcagagttacatggagggctcccaagaaggagttgcagaatggcgtg
atccgaggttatcagatcggatacagagaaaacggcccaggtagcaacggccagtacagc
atagtggagatgaaagctacaggtgacagtgaagtgtacacgctggacaaccttaagaag
tttgctcagtatggcgtggtggtccaggctttcaacagggctgggacaggcccgtccagc
acagagatcaatgccaccacattggaagatgttcccagcgagcccccccagaacgtgaga
gccatctcagtcacgtcggatgaagcggtgatcacatggtctgagccaccacggctgacg
ctccacggcgtcctgaaggggtaccgggtcgtgttttggtccctctttcctgacggagaa
tggggagagatgcagaacatcaccaccacacgtgagcaggtggagctgcgagggcttgag
aagttcaccaactacagcgtgcaggtgctggcctacactcaggcgggggatggggtccgc
agcaacgtcctgtacatccagacccgcgaggatcttcccggtccaccagctggcatcaag
gctgttccttcgtctccaaacagtgtggtggtatcctggttacctcctcttaagcctaat
ggtgtcatccgcaagtacacaatctactgctccagtccaggatctggacagcctgcgccc
agtgagtacgaggccaacccggagatgctgttctatcgcatcacgcaccttagccggggt
aaacaataccacatctgggcggccgccgtgacaactgctggccgaggcaacattagcgca
aaggtcacagtggagcctgctgggaaagttcctgccaagatcctgtcctttgggggcaca
gtgaccacaccatggatgaaggaagtgcgtctgccgtgcgcatcggtcggagagcccgcc
cccaccattaaatggaccaaagatagtgaggactcagccatccctgtgacagcagacagc
cagaaacagatcctatccaacggcacactggtgctgcgttcagtcaaagccgaggattct
gggtatcacacctgtactgccactaacaccctgggctttgacaccattatagtgaatctg
gtggttcaagttcctcctgaccagcctcgactgactgtctccaccacttcaacctcctcc
atcaccttggcatggattcctggagacaatggaggaagctccattagagggtttgtgctg
cagtattctgtggacaacacagaggaatggagggatgtgttcatcagctctacggagcgc
tccttcaggctggacaatctccgctgtggaacgtggtacaaagtcaagctggctgccaag
aacagcgtgggctccggacgcatcagtgagatcattgaggccaagacgcacgggagagaa
ccggtgtttaacaaggaccagcccctcctcactcacattaactccacccatgcaggacta
aatctgcagggttggaccagcggcggctgtcccatcacagatctgatgcttgactttcgg
cccaaaggcacgtgggcgtggcagagcctcaaagccaattccacctctcagctgttcctc
agtgagcttcgtgaggctacgtggtacgagctgaagatgaaggcctgcaacagcgcgggc
tgcggcaaccagacctcccagtttgccacaacagactatgacggcagtaccatccctcct
attaaatctgcccgtggagagggcgacgacgtgaagaagctgttctccatcggctctcct
gtcattctagttaccataggcgtcgctctgctttttattatccgcaagaaacgtaaggag
aagaggctgaaacggctccgagatgccaagagcctggctgaaatgctgatcagcaaaaac
aaccgcagcattgacacgcctgtgaagggccccccccagggcccgaggctccatatagac
atcccacgagttcagctgctcattgaagacaaggagggcatcaagcagatagcaggagag
gacaaggctgcagtgccggtgacggacacggagtttagccaatcggtgaatccacagaac
ttctgcacaggcgtctctctgcaccatcaagccctcatccagaactcggggcctcttatt
gacatgtcagacatccgtcctggaacgaaccccgtgtccaggaaaagcataaagtcagct
cacagctccaggaacagatattccagccagtggaccctgagccgaccgactcagagccat
tccacggcctcggcacgaactctgacctcagactggcgaacgatgggctcccatggaatt
acagccacagagagcgacagctacagcgccagtctttcccaagacacagataaagggcgg
aacagtatggtgtccacagagagcgcctcgtccacctatgaggagctggcgagagcctac
gaacacgccaagctagaggagcacctgcagcacgccaaatttaccatcacggaatgtttc
atctctgacagctcgtccgaccaaatgaccacaggtaccaacgacccggcagacagcatg
acctccctcagcacgccgtctgaaccaggcatctgccgctttactgcctcgccgcccaaa
ccgcaggactacgaccgtggtaaaaacgtggctgtgcccatcccccaccgcgccaacaaa
agtgaattctgtaatttacccctctacatgaagacagacccgtttttccgaaagcaaggg
gagctccatgacccttgccctgcagtacctccacgggaagcctcgatccgcagcctggcg
cagcgggcgtatcacacccagggccgccacaagactctagacccttccaagcagcagacc
ctgacactgggccattctgggctgggcagtttgggtgcaagctcgggcactgccaccttg
ccccagaggactctcaccatgcccagctccaacaatgcagcgacagcttccacctccagc
acgggcagcaacccctccaacagtaacaaggtggggggctccagagactcgctgctggaa
agtagctcctctgcactggggagactgcaaaaacagagtgtgggggcttactccaagtca
tacacacttgtgtag
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integrated database retrieval system
