Oryzias latipes (Japanese medaka): 101169746
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Entry
101169746 CDS
T02443
Symbol
ptchd3
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101169746 (ptchd3)
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Other domain-containing proteins
Patched domain-containing proteins
101169746 (ptchd3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
ACR_tran
MMPL
Motif
Other DBs
NCBI-GeneID:
101169746
NCBI-ProteinID:
XP_004081225
UniProt:
H2MCQ5
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All DBs
Position
20:complement(23306011..23312184)
Genome browser
AA seq
848 aa
AA seq
DB search
MGCRRTDCLSKPLSGLFAKLGSTVGSHPLFFFIIPIFVSAALGAGFVFLKDHEDNDFERQ
FTPMKGPSKVTRALVKENFPYDHSLFSEDRLYSGGRFASIIAVAQNHNLLDSPALEELTR
LNDKVLNITVDGRRLGFSDVCARVDRECVSNVVLEIINSRKTHQTSITYPEHSHGSETVF
LGSALGGVTTDANGTVASAQAVRLTYFLNDQESSSEAAKLWLRRFKALLSEEPSSKHVDV
SYFTSKSKQEEIDSHTTDGFPLFLITYAFAISFSVISCMRVDNVRNKVWVAVFGVVSSGL
AVVSSFGLLLYIGVPFVITVANSPFLILGIGLNNMFIMVSDWQHSNVKDSVPKRMAHTYE
EAVMSITITALTDVLKFFIGVMSDFRAVQSFCLYTATSIFFCYIYTVTFLGAFMALNGKR
EAGNRHWLTCMEIPTVKPIDRPDMYNFCCVGGDYDKTTGAEKKKLASNFFKDCFGPFLVK
SWVKGLVIVIYLVYLGMSIFGCFNVQQGIELYDLAADNSHVTRFIKKERQYFSDYGPSIM
VIVKEEFPYWDHVKRQQLQGCLEDFKGLWFVDKEISTSWLDSFLSYGQERHLNLNDKEAF
LNNLTEFFEDSPVFKQDVNLTGDVLTASRFFIQTVDVANASTEIEMLQGLKYIADQCRVA
SLTVYNKDFIYFDQYDVVVKSIIKNVAVISAVMLVVSLLLIPDPVCALLVTCSIGSVMVG
VTGFMALWDISLDSISMIIFTVCIGFTVDFSAHVSYAFASSKKQSPNEKAVEALSNLGYP
ILQGTLSTILGLSALIWSEFHTFRTFFQIFFLVMFLGMVHGLIFIPVILTLFTCCSRESK
KDLKMTRM
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcagacgcactgactgcctctcaaagcctctgtcaggcctttttgcaaagctt
ggctcaaccgtaggctcacatcctttattcttcttcattattcctatctttgtctctgca
gcgctcggtgctggcttcgtttttcttaaggaccatgaagacaatgattttgaaaggcag
ttcacccccatgaaaggcccctccaaggtcaccagggctctggtgaaagaaaactttcct
tacgaccactccctgttctctgaggacaggctctacagcggcggcaggttcgcgtccatc
atcgccgtggcccagaaccacaaccttctggacagccccgctttagaggagctcaccaga
ctcaacgacaaggtcctcaacatcaccgtggacggcaggcggctggggttcagcgacgtt
tgcgccagagtggacagagagtgcgtctcaaacgtcgtcctggagatcatcaactccaga
aaaacccatcagaccagcatcacctacccagaacactcccacgggtcggagaccgtcttc
ctgggctctgcactcggtggagtcaccacggacgccaacggcacagtcgccagtgctcag
gctgtcaggctcacctacttcctcaacgaccaagaaagctcgtctgaggccgccaagctg
tggctgagaagattcaaagctctgctgtccgaggagccaagcagcaagcacgttgacgtg
tcgtacttcacctccaaatccaagcaggaggagattgacagtcacaccacagatggcttc
cctttgttcctcatcacttacgcttttgccatcagcttctctgtcatatcttgcatgagg
gttgataatgtgaggaacaaagtctgggtggcggtctttggtgtcgtctcctctggcctg
gctgtcgtctcctcgtttggtttactgctctatatcggagtaccttttgtcatcactgtg
gcaaactctcctttcctaatactcggaatcggtctcaacaacatgttcatcatggtgtcc
gactggcagcacagcaacgtgaaagactccgtcccgaagcgaatggctcacacttacgag
gaagccgtcatgtccatcaccatcacggccctgacggatgtcctcaagttcttcataggt
gtcatgtctgacttccgggcggtccagtccttctgcttgtacaccgccacctccatattt
ttctgctacatctacacagtcacctttttgggggcgttcatggcgttgaacgggaagcga
gaggctggcaacaggcactggttgacctgcatggagatcccgacggtcaaacccattgac
cgtcctgatatgtacaacttctgctgtgtgggcggggactacgacaagaccacaggagca
gagaaaaaaaagctggccagtaatttctttaaggattgttttggcccatttctggttaaa
tcctgggtcaaaggattggtcatcgtcatttatctggtttatttgggcatgagcattttt
ggatgtttcaacgtccagcaggggattgagctgtacgatctggcggcagataactcccac
gtcacgaggttcatcaagaaggagaggcagtacttctccgactacggtccgtccatcatg
gtcatcgtgaaggaagaattcccgtactgggatcacgtcaagaggcaacaacttcaagga
tgtctggaagatttcaaaggactctggttcgtggataaggagatctccacatcgtggctt
gactccttcctatcgtacggacaagagagacacctgaacctcaacgataaagaggctttt
ctcaataatctgacagagttttttgaagactccccagttttcaagcaggacgtgaacctc
acaggagacgtcctcaccgcgtcccgcttcttcatccagacagtggacgttgcaaacgcc
agcacagaaatcgagatgcttcaaggcctgaaatacatcgcagaccagtgcagagtagcg
tctctaaccgtctacaacaaggacttcatttactttgaccaatacgacgtggtggtgaag
agcatcatcaagaacgtggcagtgatctcggcggtgatgctggtggtctccctgctgctg
atcccagaccccgtctgcgcgttgctggtgacctgctctatcgggtcggtgatggtgggg
gtgaccggcttcatggcgctgtgggacatcagcctggactccatctccatgatcatcttc
accgtttgcatcggcttcacggtggatttctccgcccacgtgtcctacgccttcgcctcc
agcaaaaagcagagtcccaacgagaaggcggtggaggccctctccaacctgggctacccc
atactgcagggcactctgtctacgatcttaggcctctcggcgctgatctggtcggagttc
cacaccttcagaacattcttccagatcttcttccttgtcatgttcctcgggatggtccac
ggtctcattttcattcctgtaattctaacactcttcacctgctgctctcgtgagtccaag
aaagacttgaaaatgaccagaatgtga
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