Oryzias latipes (Japanese medaka): 101169884
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Entry
101169884 CDS
T02443
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X4
KO
K13210
far upstream element-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101169884 (fubp1)
03041 Spliceosome [BR:
ola03041
]
101169884 (fubp1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101169884 (fubp1)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101169884 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_PNO1_2nd
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
101169884
NCBI-ProteinID:
XP_004078652
LinkDB
All DBs
Position
17:complement(4257598..4265216)
Genome browser
AA seq
666 aa
AA seq
DB search
MADYSSVAPPSSNSGGGMNDAFKDALQRARQIAAKIGGDGVAAPQSSDFGYGGQKRPLED
AGGYFPMANLDIDQPETKKVATNDAFSAMAGMGGPSRSSSEEFKVPDGMVGFIIGRGGEQ
ISRIQQESGCKIQIAPDSGGMPERSVTLTGPQDSIQAAKRLLSEIVEKGRPAPAFHHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPF
KVQQAKEMVMELIREQGFREQRGEYGSRIGGESLDVPVPRFAVGIVIGRNGEMIKKIQND
TGVRIQFKPDDGSAPDRIAQIMGPPDQAQHAADIIADLLRSVQSGGPPGHGGGRGRGRGQ
GNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPNIK
MFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGPPGPHGGPGPHGPPGPPGPPGGPMGP
YNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYAQYGQ
QPQASMTPTSGAPGTTQPNGQGDPQAAGQSGQTDYTKAWEEYYKKMGQQNQQPQDYTKAW
EEYYKKQGQAAPQATPPAAAAAAGSQPGGQPDYSAAWAEYYRQQAAYYGTANPQAMGAAP
QAPQGQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacagcagcgtggctcccccgtcctccaactctggcggtggcatgaatgac
gcttttaaagacgcacttcagcgagcaagacagattgcggcaaagattggcggggatggc
gttgcggcaccccaaagcagcgatttcggctacggagggcagaaaaggcccctggaggac
gctggtgggtattttcccatggctaacctggatatcgatcaaccagagacgaagaaagta
gctacaaatgatgccttctcagcaatggcaggaatgggtggcccgtccagatcatcatct
gaagagtttaaggttcccgatggaatggttggattcattattggaagaggaggtgaacag
atatcacggattcagcaggagtctgggtgtaaaatacaaatagctcctgacagtggagga
atgccagaaagatcggtgaccttaacaggaccgcaagactcgattcaggctgctaaaagg
ctgctgtcagagattgtagagaagggccgtccagctccagcctttcaccataacgacgga
ccgggaatgacagtccaggaaatcatggtccccgcctctaaagccggactagtcattgga
aaagggggggagaccatcaaaagtctacaggaaagggctggagttaagatggtcatgatt
caggacgggccgcagaacacgggtgcagacaaaccgctccggatctccggggagcccttt
aaagttcagcaagccaaagagatggtgatggagctgatcagagagcagggctttagggag
cagcggggagagtacggttcaaggatcggaggggaaagcttagatgttcccgtcccacgg
tttgctgtcggaattgtcatcgggagaaatggggagatgatcaagaaaatacagaacgac
acaggagtccggatccagttcaagccagatgacgggagcgcccccgacaggatagcacag
atcatggggccccccgatcaggctcagcacgccgcagacatcatcgcagacctgctgagg
agcgtccagtccggaggacctccgggacacggaggtgggagaggacgtggtcgggggcag
ggaaactggaacatgggcccccctggtggcctgcaggagtttacctttacagttccgacc
atgaagacgggcctcatcattgggaaaggcggtgagaccatcaagggcatcagccagcag
tctggagctcgcatcgagctgcagaggaatccgccacccaactctgaccccaacatcaag
atgttcaccgtcagaggctcccctcaacagatcgactacgccaggcagctggtggaggag
aaaatcgggggtccagtcactcccatgggtggcccacatggtcctcctggcccacacgga
ggaccaggcccacatggccctccaggtccccctggtcccccaggaggacccatgggtccg
tataaccccgggccgtacaaccaggggcctccaggaccacacggtcctcccgctccttat
cagcctcaggggtggggcaacggctatccccactggcagcaaggacagcctgatccaaat
aaagctgcagctgatgccaacgcagccgcatgggcagcttactacgcccagtatggccag
cagccgcaggcctccatgactccaaccagcggcgctcccggcaccactcaacccaacggc
caaggtgacccacaggctgcaggtcagagtggacaaacagattacaccaaggcctgggag
gaatattacaagaaaatgggtcaacagaaccagcaaccccaagactacacaaaagcctgg
gaggagtattacaagaaacaaggtcaagcagcccctcaggccacacccccagcggcggca
gcagcagcaggctctcagcccggaggccagcctgactacagcgccgcctgggcggagtac
taccggcaacaggctgcttactacggtacagccaaccctcaggcgatgggtgcagcacca
caagcccctcagggccagtaa
DBGET
integrated database retrieval system
