Oryzias latipes (Japanese medaka): 101169909
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Entry
101169909 CDS
T02443
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101169909
Cilium and associated proteins [BR:
ola03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
101169909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_11
TPR_NPHP3
Rapsyn_N
TPR_6
TPR_9
TPR_17
TPR_16
TPR_14
TPR_19
Motif
Other DBs
NCBI-GeneID:
101169909
NCBI-ProteinID:
XP_023816435
LinkDB
All DBs
Position
12:complement(1243632..1355130)
Genome browser
AA seq
2452 aa
AA seq
DB search
MFPGSFSGLQSGDERWERRPQSLTDMEKPRTKKEKFSFFGSRSTNRTVHPPSAPSSCPLK
PPSPVGTRSVPGSGSGAAALSKAEFLERVRRSNQACQKGDFALAVRLYSEALGADPQNCI
LYSNRSAAYLRLGQYSTALDDAIKARLINPKWPKAYFRQGVALQYLGRHADALAAFASGL
AQDPKSLQLLVGMVEAAMKSPLRDALESTYQQLQAMKLDKSPFVVVSVIGQELLTHGFPE
ASVVVLEAGLKIGTCSLKLRGSVFSALSSAYWSLGNVEKSMAYMQQDLEVTKALGDQSGE
CRAHGNLGSAFFSKSNYREALANHRNQLVLAMKLKNREAASGALSSLGHVYTAIGDYPNA
LASHKQCVLLARQDQCRLTEARQLGNMGAVYTALGDFNNAVQCHEQHLDIAKSLENRREE
ARAYSNLGSAHHSERDFDKAVSYHTRVLELGEELADRAIQMRAYAGLGHAARCMQDLERA
QQHHQKQLEIAEELQDRAAQGRASSNLGIIHQMKGDYNAALKLHKAHLAFAQELGDYAAQ
GRAYGNMGNAYHALGMHEQAVQYHRQELQISLEVNDRSSQASTHGNLAVAFQALGAHDRA
LQHYLQHLSISRHMRDTQSEARALVNLGNFHSWRGEYAQALPYFQQYLALAPDLQDLEGE
GKVCHNLGYAHYCLGQYRDAVRYYQQDLALAKDLQDKLAQATAYCNLGLAYKALGEFSKA
EECQRSLLSAAQALDHTQAVFRALGNLGDVCVCRGDLPGAVKFYQQQLTLAQKAGSRRME
GDAFLALGSAHRLLRQLDSALSFHSQELTIRKDLGDQQGECRALGHLAAVHMGLGDYATA
FQCYETQLGLAQGLRDPALEAQVHGNMGITKMNMGVLEEAIGYFEQQLAMLQQLSGAEGL
LDRGRAFGNLADCYDALGDYEEAIKNYEKYLTVAQSLNRVQDQEKAYRGLGRAHRSAGSL
QQALVCLEKRLVVAHELGGEGGGKAQAYGELGTLHSQLGNYEQALSCLEHQLNIARSAGD
QSLEAEASDALGGVYRLMADNETALQWHQRALDIAEQTGCTRSQARACGNLGLTYEALGN
YERAVVLQEQHLSVAAQTNDLMAKTLAYGSLGRTHHALLNYPQAVMYLQEGLRLAEQLGL
KEDEAKIRHGLGLSLWAAGNLEDAQHQLYRASALFEMIRNETQHNVEYKLSLFDLETSSY
QALQRVLVSLGRHDEALAVAERGRTRAFADLLVERQKGSRQTTKADAYVPVTVEQILETV
NGQKAMVLYFSLAGGFLYSWLISPGSGILKFNQVNLGEAGPGGLEECGGSPPCSLEQYIY
NAREALGVDSHHSRVCSNSETESEAGDLQFEELGSSADPTGYLRMVSRNNLFNRSCHSVT
SLSGATFSPVKDGCSPPPGRRSGTGKPPLRALYDLLVAPMEGGLMHGGGPVGRNRQLVLV
LEGELYLIPFALLKGSSSNEFLYERFGLIAVPSLAALGAAAKPPPRRGAPPHCSDGGSLA
AVVGAPRLPPSIMDRWLWGPLPSAQEEALWLGEQLGCRPLTGAKATKERVLAALSQAECV
HFATHVSWKLAALVLAPAPEVAQGEGPSGRADQRHTGSFLRSGGGGLRVAEEGSEDGGGV
CDVESVCDSPPLQDFLLTAADVLDLNLTVKLLVLRMFPESSGRITADGVVGLTRAFLAAG
VRCVCVSLWPVPAAASKLFTRHFYTALLGGAKASAALTEAMKALQRSKQFSHPSNWAGYM
LIGSDVKLNSPMSVVGQALAEILQHPDRARDALRVLLHLVEKSLQRIHSRHCNPMYTSQQ
SVDNKVGGVPGWQALLAAVGFRLDVSCVGLPAAVFFPTSDPGDRLQQCSSTLQSLLGLSP
AALQALCKLVSASEAGEQLVQKAVKNVAAMLHQVLVQLQSGDKEQDFPLSPVQVSIGVQL
WRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQAGRRNLHFALQSLLALFDSTELPKRLSM
DSSSSLESLSSSQSTSQPQSLPPLLSCDPPQPPFVPPDSLSSDAISVYSLSSLASSLSFL
SRPEPAGSDIISQNPHQQDQDRHCGGACPPLHHGGSLRGRLSSQGGEDEYEGFSIICSEP
LRRGGRDIHTPTAGQHHGRGGVGRSAGGRPLTISSKGSISTPTSPLKSTPMSLTAPNSPP
IQEVSPPQQSGKGKASSSESDQSSTETDSTVKSQERAGPVGQLDPQVLAQKILEETQSHM
QAVESLQKRTGGAGRHTEGRGDVHARHVSRSTPTTPTLSPRGGAFRPSETSAFSRPHSRA
SLKASSSPLSVSSRHSRLSVSTPPPAPPKPPSRSSSLQKLGGGRPAERLRPHPLSRSSVS
STPSISPEPKHDFKFKETQNFWVSQTQEERSPPRPLWGEGKKMSAVQKDVLGLLSLSPGR
DQDKSNGGNRPNGHQTPEAKPPVPLTSAPPTNSKGSGFKFLKPGHFFPSSKC
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atgttccccgggagtttctccgggctccagtccggggatgaacgctgggagcggcggccg
cagagtctgacagacatggagaagccacgaacgaagaaggagaagttctctttttttgga
tcccgctccacgaacagaaccgtccaccccccttctgcaccctcttcctgtcctctgaag
cctccatctcctgtggggacgcggtccgtccctggatctggttctggtgccgccgccctg
agcaaggctgaatttctggagcgtgtgcggcgcagtaaccaggcctgccagaagggggac
ttcgccctggccgtacgtctgtactcggaggccctcggcgccgacccgcagaactgcatc
ctgtacagcaaccgctccgccgcgtacctgaggctgggccagtacagcacggctctggac
gacgccatcaaagcgcggctcatcaaccccaagtggccgaaggcttattttcgtcaaggg
gtcgccctgcagtacctgggtcgccatgccgacgcccttgcggcgttcgcctcgggcctc
gcacaggaccccaagagcctccagctgctggtggggatggtggaggcggcgatgaagtcc
ccgctcagagacgctcttgagtccacctaccagcagctgcaggcgatgaagctggacaaa
agcccgtttgtggtcgtgtccgtcatcggtcaggagctgctgacccacggcttccctgag
gcttcggtcgttgtcttggaggcggggctcaagatcggcacctgctccctaaagctgcgt
ggttccgtcttctctgctctgagctcggcgtactggtctctaggcaacgtggagaagagc
atggcttacatgcagcaagacctggaggtgacaaaggccttaggtgaccagtcaggtgaa
tgccgcgctcatgggaacctcggatctgccttcttctccaaaagtaattatcgagaagct
ctggccaatcacagaaaccagctggttctggccatgaagctgaagaaccgcgaggctgcg
tctggcgccctcagcagtctgggacatgtatacacagccatcggggactatcctaacgcg
ctggccagccataagcagtgtgtgttgttggcacgacaggaccagtgccggctaacggag
gcccgccagctgggcaacatgggtgctgtgtacactgctctgggagacttcaacaacgct
gtgcaatgtcatgagcagcacttggacatcgcaaagagtctggaaaaccgtcgtgaggag
gcgcgggcgtacagcaacctgggcagcgcccatcactctgaacgggacttcgacaaggcc
gtgtcctaccacaccagagtgctggagctgggggaggagctggcagacagggccatccag
atgagggcttacgccggtctgggacacgccgcccggtgcatgcaggacttggagcgggca
cagcagcaccaccagaagcagctggagattgctgaggagctgcaggacagagccgctcag
ggccgagcctcttccaacctgggaatcatccatcagatgaagggcgactacaacgcggca
ctgaagctccacaaggctcacctggccttcgctcaggagctgggagactacgccgctcag
gggcgggcctatgggaacatggggaacgcctatcacgctctgggcatgcacgagcaggcg
gtgcagtaccaccggcaggagctgcagatctccttagaggtgaacgatcgctcgtcacag
gcgtccacgcatgggaacctcgccgtggccttccaggcgctgggcgcccacgaccgagcg
ctgcagcactacctccaacacctgagcatctcacgccacatgcgggacactcagagtgaa
gccagggctttagtgaacctggggaacttccacagctggaggggggagtacgctcaggct
ctgccttacttccagcagtacctggctctggctccagacctgcaggacctggaaggagaa
ggaaaagtttgtcacaacctgggctatgctcactactgtctgggacagtacagagatgcc
gtcaggtattatcagcaggacttggctttggctaaagaccttcaggacaaactagctcaa
gccacagcttactgtaacctgggtctggcctacaaggccctgggagagttcagcaaagct
gaggagtgtcagagatccctgctgtctgctgctcaggccttggaccacacacaggcggtt
ttccgagcgctcgggaacctcggggatgtttgtgtgtgtcggggcgatctgccgggagcg
gtgaagttttatcagcagcagctgactctggctcagaaagccggcagtcggaggatggag
ggcgacgccttcttggcgcttggatcagctcacaggctgctccgtcagttggactcggcc
ttgtccttccacagtcaggagctgaccatccggaaggatctgggcgatcagcagggcgag
tgccgggccctcggtcacctggcggccgtccacatggggctgggggactatgccacggcc
ttccagtgctatgagacccagctgggcctggcacagggacttagggaccccgctctggag
gcccaggtccacgggaacatgggcatcaccaagatgaacatgggcgtcttggaggaggcc
ataggatactttgagcagcagctggccatgctgcagcagctgagtggagccgagggcctg
ctggacagggggcgggccttcgggaacctggccgactgctatgacgctctgggagactac
gaggaggccatcaagaactacgagaagtacctgacggtggctcagagcctcaaccgcgtc
caagaccaggagaaggcctacaggggactcggcagagctcataggtccgcgggcagcctc
cagcaggcgctggtgtgcctggaaaagcgcctagtggtggcccacgagcttgggggggaa
ggagggggcaaggcccaggcctacggggagctggggaccttacacagccagctgggaaac
tacgagcaggccctgtcctgtctggagcatcagctcaacatcgcacgctcagccggggat
caatccctggaggcggaggcgagcgacgctctgggaggagtttatcggctgatggccgac
aacgagacggctctgcagtggcaccagagggcgctggacatcgccgagcagacgggctgc
accaggagccaggcgcgggcctgcgggaacctgggcctgacctacgaggctctggggaac
tacgagcgagccgtggtcctccaggagcagcacctgagcgtggcggcgcagaccaacgat
ctgatggccaaaactctggcctacggcagcctgggcaggacacaccacgcactgctgaac
tacccgcaggctgtgatgtacctgcaggaaggtcttcgtctggcggagcagctgggcctg
aaagaagacgaagcgaagatccggcatggcctcggcctttctctgtgggccgccgggaac
ctggaggacgctcagcatcagttgtacagagcgtctgcgttgtttgagatgattcgtaat
gagactcagcacaatgtggagtacaagctctctctgtttgacctggaaaccagctcatac
caggctctccagagggtcctcgtcagccttggacgccatgacgaggcgctggcggtcgcc
gagcgagggcgaacccgtgccttcgctgatctgctggttgaacggcagaaaggaagtcgg
caaacaacgaaggccgacgcttacgttccagtgacagtggagcagattctggagacggtg
aacggtcagaaggccatggtcctctacttttccctggctggaggcttcctgtacagctgg
ctgatttctcctggctcagggatcctgaagttcaaccaggtcaatctgggcgaggctgga
ccaggaggcttggaggagtgtggggggagtccgccgtgctctctggagcagtacatctac
aacgccagagaggctctgggggtggacagccaccacagcagagtttgttccaacagtgag
acggagagcgaagccggagatcttcagtttgaggagctcggctcctccgccgaccccacc
ggctacctccgcatggtgtccagaaacaacctgttcaacaggagctgtcacagcgtgacc
agtctctccggcgccacgttctctcccgtgaaagatggatgttctcctcctccaggccga
cggagcggcaccggcaaacctccgctgcgagcgctgtacgacttgctcgtggcgccgatg
gaagggggcctcatgcacggcggcgggcctgtcggcaggaacaggcagctggtcctggtt
ctggaaggagagttgtacctgattccgttcgccttgctcaaaggcagctcctccaacgag
ttcctgtacgagcgcttcggcctcatcgcggttccttctctggcggctctgggcgcggcg
gcgaagcctcctcctcgccgtggcgccccccctcactgctcagacggaggctcgctggcg
gcggtggtgggggctcctcgactgccccccagcatcatggaccgctggctgtgggggccc
ttaccctccgctcaggaagaagccctgtggctgggggagcagctggggtgtcgccccctg
accggcgccaaggccaccaaggagcgcgtcctagcggcgctgagccaggcggagtgcgtt
cacttcgccacgcacgtatcgtggaagcttgccgccctggttctcgctcccgctccagag
gtcgctcagggggaggggccgagcggccgagcggatcagcgccacaccggctcgtttctg
aggagtggcggcggcggactcagagtagcagaggaggggagtgaggacgggggaggcgtg
tgtgacgtggagagtgtgtgcgactcccccccccttcaggacttcctcctcaccgccgca
gatgttctggacctgaacctgacggtcaaactgctggttctgaggatgttcccggagtcc
agcggcaggatcacggccgatggcgtggtggggctgacccgggccttcctggctgcagga
gtgcgttgtgtctgcgtctcgctgtggcccgttcccgccgccgcctccaagctgttcaca
cgccacttctacacagccttactgggcggggccaaagccagcgccgcgctgactgaggcc
atgaaggcgctgcagagaagcaagcagttctcacacccgtccaactgggccggttacatg
ttgatcggcagcgacgtgaagctcaacagtcccatgtcggtggttggtcaagctctggca
gagatcctgcagcacccggaccgagccagagatgctctgagggttctgctgcacctggtg
gagaagtctctgcagcgcatccacagcagacactgtaaccccatgtacacgtcgcagcag
agcgtggacaacaaggttgggggggtccccgggtggcaggccctgctggctgccgtgggc
ttccggttggatgtctcctgcgtcggactccctgccgccgtcttcttcccaacgtcggac
cccggagatcgcctgcagcagtgcagctccacgctgcagtctctgctcggtctgagtccc
gccgctctgcaggcactctgtaagctggtgtccgcgtccgaagctggagagcagctggtt
cagaaggcggttaagaacgtggcagcaatgcttcatcaggttctggtccagctgcagtcc
ggagacaaagagcaggacttcccgctgtcccccgtccaggtgtccatcggcgtgcagctc
tggaggctcccgggctgccacgagttcctggctgctctgggttttgacctgtgtgaggtc
ggccaggaggaggtggtgctgaagacggggaagcaggccggcaggaggaacctgcacttc
gctctgcagtcgctgctcgctctgtttgattccacggagcttcccaaacgtctgagcatg
gatagctcctcctccctggagtccctgtcctcctcccagtccacctcccagccgcagtct
ttaccccccctgctctcttgtgacccccctcagccgcctttcgtcccccccgacagcctc
tccagtgacgccatctccgtctacagcctcagctccctggcctcctccctcagcttcctg
tcccgccccgagcccgccggaagtgacatcatcagccagaacccgcatcagcaggaccaa
gaccgccactgtgggggggcctgccccccccttcaccacggcggctcgttgagaggtcgc
ctgagcagtcagggaggggaggatgagtatgaggggttctccatcatctgcagcgagccg
ctacggcgaggagggcgggacatccacacgccaacggcagggcaacatcatggcaggggc
ggggttgggaggtctgcgggggggcgtcccttgaccatttcctccaaggggagcatcagc
acccccacctccccgctgaaatcaaccccgatgtccttaacggctccaaacagccccccc
atccaggaagtctcgccgcctcagcagagcggcaaaggaaaggccagcagctcagaatcg
gaccagtccagcaccgagacggacagcacggtcaaatcccaggagagggcggggcctgtg
ggtcaactggacccccaggttctggcccagaagatcctggaggagacgcagagccacatg
caggccgtggagagcctgcagaagcggacaggaggcgccgggagacacaccgaggggcgg
ggagacgtacacgcccgccacgtgtcacggtctacgcccacaacccccaccctcagcccc
agagggggggcgtttcggccgtcagagacgagcgccttcagcagaccccacagccgggcg
agtctgaaggcgtcctcctctcctttgtccgtgtccagccgtcattcgcggctctccgtc
tccacgcctcctccggctccgcccaaaccgccatcccgctcctcgtctctgcagaagctg
ggcggcggtagacctgctgagaggctccgcccccatccactctcccgttcctccgtatcg
tccactccgtccatttcccccgagccgaagcacgacttcaaattcaaggagacccagaac
ttctgggtcagccagacccaggaggagcgcagccccccccgcccactctggggggagggc
aagaagatgagcgccgtccagaaggatgttctgggtttgctgagtctgtcgccgggacgc
gatcaggacaagagtaatggcggcaacagacccaacggtcatcagacgcctgaggccaaa
ccgcccgtacctctgacttcggccccgcccacaaactctaaagggagcggcttcaagttc
ctgaagccgggtcatttcttcccgtcctccaaatgctga
DBGET
integrated database retrieval system
