Oryzias latipes (Japanese medaka): 101169915
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Entry
101169915 CDS
T02443
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101169915 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101169915 (nhej1)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101169915 (nhej1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
Motif
Other DBs
NCBI-GeneID:
101169915
NCBI-ProteinID:
XP_020563854
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All DBs
Position
2:11440749..11474354
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AA seq
312 aa
AA seq
DB search
MDTSCASSEDVLLQRPWIPICIDGCQFLSKSWFGEASYRVLLTDMRCVWEETMDAAATQS
RAQELNRRLRASVTAFFSHLCEVAQPCLLGGNGKADGGAKITVTQLAADGLIMRLKSELA
GLPFHWEFHCSPAPVSLVCVQLVRPLLGMSRLLQLQVDQLGRLLVRKDAEIQDYKENGAT
LSRERLQTDVFQEETYRENYLAKALPLLWSGSSDDLGFSADLQQLYATVVTHCNTRKRKL
SEEDCSAAEEPDLALLQPAVGSVKTEPAEREVGTQEKISKEKTTDRTSIQQESNAAERQS
SKPKKKKVGLFR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagctgcgcttcttctgaagatgtcctcctccagcgaccttggatcccgatc
tgtatagacggatgccagtttctgtccaaaagctggttcggcgaagcgtcctaccgtgtc
ctgctgacggacatgcgctgcgtgtgggaggagacgatggacgcggcggccacccagagc
cgagcacaggagctgaaccggcgtctgcgagcgtcggtcacggcttttttctcccacctg
tgcgaggtggcgcaaccctgtctgttgggaggcaacggcaaagctgatggaggggctaag
atcaccgtgacccaactggcggcagacggcctcatcatgaggctgaaaagtgagctagcc
gggcttccgtttcactgggagttccactgcagtccagctcctgtctctttggtgtgtgtg
cagctggtgcgccccctgctgggcatgagccgcctcttgcagttgcaggtggatcagctc
ggacgtctgctggtgaggaaagacgcagagatccaggactacaaggagaatggagccaca
cttagcagagaacgcctgcagacggatgttttccaggaggagacctacagagagaattat
ctggcaaaggctcttccactgctgtggtctggatcttcagacgacctgggcttcagcgcc
gacctgcagcagctttacgccacagtcgtcactcactgtaacacgcgaaaacgcaaactg
tccgaagaggattgttctgctgctgaagagccagacctggccttgttacaaccagccgtt
ggatctgttaagaccgaacctgcagaaagggaagttgggacccaagagaaaatttccaaa
gaaaagacaacagacagaacttcaatccagcaggagtcgaacgcagcagagcgccagtcg
tccaagccaaagaaaaagaaggtgggattgttcagatga
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